RNA–Protein interactions for RNA: ENST00000461074.1

MCF2L2-205, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best)

Gene MCF2L2, Length 7,666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-205ENST00000461074 ANKLE2Q86XL3 938 aa10.12□□□□□ -0.79
MCF2L2-205ENST00000461074 SYTL4Q96C24 671 aaPredicted RBP10.12□□□□□ -0.79
MCF2L2-205ENST00000461074 MAP3K1Q13233 1512 aa10.12□□□□□ -0.79
MCF2L2-205ENST00000461074 ODF2Q5BJF6 829 aa10.12□□□□□ -0.79
MCF2L2-205ENST00000461074 CCDC158Q5M9N0 1113 aa10.12□□□□□ -0.79
MCF2L2-205ENST00000461074 AEBP1Q8IUX7 1158 aa10.12□□□□□ -0.79
MCF2L2-205ENST00000461074 DACH1Q9UI36 760 aa10.12□□□□□ -0.79
MCF2L2-205ENST00000461074 GNAI2P04899 355 aa10.12□□□□□ -0.79
MCF2L2-205ENST00000461074 EPS15P42566 896 aa10.12□□□□□ -0.79
MCF2L2-205ENST00000461074 GSE1Q14687 1217 aa10.12□□□□□ -0.79
MCF2L2-205ENST00000461074 PRXQ9BXM0 1461 aa10.11□□□□□ -0.79
MCF2L2-205ENST00000461074 ELL2O00472 640 aaPredicted RBP10.11□□□□□ -0.79
MCF2L2-205ENST00000461074 ABTB2Q8N961 1025 aa10.11□□□□□ -0.79
MCF2L2-205ENST00000461074 KCNH5Q8NCM2 988 aa10.11□□□□□ -0.79
MCF2L2-205ENST00000461074 SMARCE1Q969G3 411 aa10.11□□□□□ -0.79
MCF2L2-205ENST00000461074 KIF14Q15058 1648 aa10.11□□□□□ -0.79
MCF2L2-205ENST00000461074 SF3B2Q13435 895 aaKnown RBP10.11□□□□□ -0.79
MCF2L2-205ENST00000461074 PROSER2Q86WR7 435 aaPredicted RBP10.11□□□□□ -0.79
MCF2L2-205ENST00000461074 IQGAP2Q13576 1575 aa10.11□□□□□ -0.79
MCF2L2-205ENST00000461074 CT47A1Q5JQC4 288 aaPredicted RBP10.11□□□□□ -0.79
MCF2L2-205ENST00000461074 POLA1P09884 1462 aaPredicted RBP10.11□□□□□ -0.79
MCF2L2-205ENST00000461074 RUFY1Q96T51 708 aa10.11□□□□□ -0.79
MCF2L2-205ENST00000461074 MAGI1Q96QZ7 1491 aaPredicted RBP10.11□□□□□ -0.79
MCF2L2-205ENST00000461074 RTEL1-TNFRSF6BF6WH68 1400 aa10.11□□□□□ -0.79
MCF2L2-205ENST00000461074 FILIP1LQ4L180 1135 aa10.11□□□□□ -0.79
MCF2L2-205ENST00000461074 DNAI2Q9GZS0 605 aa10.11□□□□□ -0.79
MCF2L2-205ENST00000461074 CDKL5O76039 1030 aa10.1□□□□□ -0.79
MCF2L2-205ENST00000461074 WASHC4Q2M389 1173 aa10.1□□□□□ -0.79
MCF2L2-205ENST00000461074 C22orf23Q9BZE7 217 aa10.1□□□□□ -0.79
MCF2L2-205ENST00000461074 KRI1Q8N9T8 703 aaKnown RBP10.1□□□□□ -0.79
MCF2L2-205ENST00000461074 FSD1Q9BTV5 496 aa10.09□□□□□ -0.79
MCF2L2-205ENST00000461074 DCTN1Q14203 1278 aa10.09□□□□□ -0.79
MCF2L2-205ENST00000461074 EXOC6Q8TAG9 804 aa10.09□□□□□ -0.79
MCF2L2-205ENST00000461074 CTNNA3Q9UI47 895 aa10.09□□□□□ -0.79
MCF2L2-205ENST00000461074 ABCC11Q96J66 1382 aa10.09□□□□□ -0.79
MCF2L2-205ENST00000461074 SNAPC4Q5SXM2 1469 aa10.09□□□□□ -0.79
MCF2L2-205ENST00000461074 KRT32Q14532 448 aa10.09□□□□□ -0.79
MCF2L2-205ENST00000461074 ZNF287Q9HBT7 754 aa10.09□□□□□ -0.79
MCF2L2-205ENST00000461074 NEUROD6Q96NK8 337 aa10.09□□□□□ -0.79
MCF2L2-205ENST00000461074 CCDC39Q9UFE4 941 aa10.09□□□□□ -0.79
MCF2L2-205ENST00000461074 HOMER1Q86YM7 354 aa10.08□□□□□ -0.8
MCF2L2-205ENST00000461074 BCL2L13Q9BXK5 485 aa10.08□□□□□ -0.8
MCF2L2-205ENST00000461074 ABCA10Q8WWZ4 1543 aa10.08□□□□□ -0.8
MCF2L2-205ENST00000461074 OFD1O75665 1012 aa10.08□□□□□ -0.8
MCF2L2-205ENST00000461074 TRIM22Q8IYM9 498 aa10.08□□□□□ -0.8
MCF2L2-205ENST00000461074 CNKSR2Q8WXI2 1034 aa10.08□□□□□ -0.8
MCF2L2-205ENST00000461074 STIM1Q13586 685 aa10.08□□□□□ -0.8
MCF2L2-205ENST00000461074 ERBINQ96RT1 1412 aa10.08□□□□□ -0.8
MCF2L2-205ENST00000461074 CDK5RAP3Q96JB5 506 aa10.08□□□□□ -0.8
MCF2L2-205ENST00000461074 LRPPRCP42704 1394 aaKnown RBP10.08□□□□□ -0.8
MCF2L2-205ENST00000461074 VPS37CA5D8V6 355 aaPredicted RBP10.08□□□□□ -0.8
MCF2L2-205ENST00000461074 FBXW7Q969H0 707 aa10.08□□□□□ -0.8
MCF2L2-205ENST00000461074 MAP7D2Q96T17 732 aa10.08□□□□□ -0.8
MCF2L2-205ENST00000461074 MAGEC2Q9UBF1 373 aaPredicted RBP10.08□□□□□ -0.8
MCF2L2-205ENST00000461074 KINO60870 393 aaKnown RBP10.07□□□□□ -0.8
MCF2L2-205ENST00000461074 WASF1Q92558 559 aa10.07□□□□□ -0.8
MCF2L2-205ENST00000461074 CAVIN1Q6NZI2 390 aaKnown RBP10.07□□□□□ -0.8
MCF2L2-205ENST00000461074 TSHZ2Q9NRE2 1034 aa10.07□□□□□ -0.8
MCF2L2-205ENST00000461074 SYNJ1O43426 1573 aa10.07□□□□□ -0.8
MCF2L2-205ENST00000461074 CCAR1Q8IX12 1150 aaKnown RBP10.07□□□□□ -0.8
MCF2L2-205ENST00000461074 RAD21O60216 631 aa10.07□□□□□ -0.8
MCF2L2-205ENST00000461074 MTHFSP49914 203 aa10.07□□□□□ -0.8
MCF2L2-205ENST00000461074 RTN4Q9NQC3 1192 aaKnown RBP10.07□□□□□ -0.8
MCF2L2-205ENST00000461074 CCDC27Q2M243 656 aa10.07□□□□□ -0.8
MCF2L2-205ENST00000461074 HSP90B2PQ58FF3 399 aa10.07□□□□□ -0.8
MCF2L2-205ENST00000461074 ESCO1Q5FWF5 840 aa10.07□□□□□ -0.8
MCF2L2-205ENST00000461074 NSD2O96028 1365 aa10.07□□□□□ -0.8
MCF2L2-205ENST00000461074 PPP2R1AP30153 589 aa10.06□□□□□ -0.8
MCF2L2-205ENST00000461074 TRIM21P19474 475 aaKnown RBP10.06□□□□□ -0.8
MCF2L2-205ENST00000461074 NOM1Q5C9Z4 860 aaKnown RBP10.06□□□□□ -0.8
MCF2L2-205ENST00000461074 FOXD4L1Q9NU39 408 aa10.06□□□□□ -0.8
MCF2L2-205ENST00000461074 FCHSD2O94868 740 aa10.06□□□□□ -0.8
MCF2L2-205ENST00000461074 DESP17661 470 aa10.06□□□□□ -0.8
MCF2L2-205ENST00000461074 TWISTNBQ3B726 338 aaPredicted RBP10.06□□□□□ -0.8
MCF2L2-205ENST00000461074 ZSCAN31Q96LW9 406 aaPredicted RBP10.06□□□□□ -0.8
MCF2L2-205ENST00000461074 CABP4P57796 275 aa10.06□□□□□ -0.8
MCF2L2-205ENST00000461074 TTC39AQ5SRH9 613 aa10.06□□□□□ -0.8
MCF2L2-205ENST00000461074 CABP2Q9NPB3 220 aa10.06□□□□□ -0.8
MCF2L2-205ENST00000461074 NOL7Q9UMY1 257 aaKnown RBP10.06□□□□□ -0.8
MCF2L2-205ENST00000461074 ZNF652Q9Y2D9 606 aa10.06□□□□□ -0.8
MCF2L2-205ENST00000461074 TCP11L2Q8N4U5 519 aa10.06□□□□□ -0.8
MCF2L2-205ENST00000461074 MNS1Q8NEH6 495 aa10.06□□□□□ -0.8
MCF2L2-205ENST00000461074 MRE11P49959 708 aa10.05□□□□□ -0.8
MCF2L2-205ENST00000461074 GGNBP2Q9H3C7 697 aa10.05□□□□□ -0.8
MCF2L2-205ENST00000461074 CCAR2Q8N163 923 aaKnown RBP10.05□□□□□ -0.8
MCF2L2-205ENST00000461074 SDF4Q9BRK5 362 aa10.05□□□□□ -0.8
MCF2L2-205ENST00000461074 SURF6O75683 361 aaKnown RBP10.05□□□□□ -0.8
MCF2L2-205ENST00000461074 SYCP1Q15431 976 aa10.05□□□□□ -0.8
MCF2L2-205ENST00000461074 CCDC57Q2TAC2 916 aa10.05□□□□□ -0.8
MCF2L2-205ENST00000461074 HDGFL1Q5TGJ6 251 aa10.04□□□□□ -0.8
MCF2L2-205ENST00000461074 PRAM1Q96QH2 718 aa10.04□□□□□ -0.8
MCF2L2-205ENST00000461074 CNNM1Q9NRU3 951 aa10.04□□□□□ -0.8
MCF2L2-205ENST00000461074 ZNHIT6Q9NWK9 470 aaKnown RBP10.04□□□□□ -0.8
MCF2L2-205ENST00000461074 FAM135AQ9P2D6 1515 aa10.04□□□□□ -0.8
MCF2L2-205ENST00000461074 ERLIN2O94905 339 aa10.04□□□□□ -0.8
MCF2L2-205ENST00000461074 PRKAR2BP31323 418 aa10.04□□□□□ -0.8
MCF2L2-205ENST00000461074 ZRSR2Q15696 482 aaKnown RBP10.04□□□□□ -0.8
MCF2L2-205ENST00000461074 AMOTQ4VCS5 1084 aa10.04□□□□□ -0.8
MCF2L2-205ENST00000461074 HMOX1P09601 288 aa10.04□□□□□ -0.8
MCF2L2-205ENST00000461074 ANKRD18AQ8IVF6 992 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms