RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 DDX17Q92841 729 aaKnown RBP22.46■■□□□ 1.19
YIPF3-205ENST00000460547 LRRC59Q96AG4 307 aaKnown RBP22.46■■□□□ 1.19
YIPF3-205ENST00000460547 CDC42BPGQ6DT37 1551 aa22.45■■□□□ 1.19
YIPF3-205ENST00000460547 AHDC1Q5TGY3 1603 aaPredicted RBP22.45■■□□□ 1.18
YIPF3-205ENST00000460547 IRX6P78412 446 aaPredicted RBP22.44■■□□□ 1.18
YIPF3-205ENST00000460547 PPP4R2Q9NY27 417 aa22.44■■□□□ 1.18
YIPF3-205ENST00000460547 CABP2Q9NPB3 220 aa22.43■■□□□ 1.18
YIPF3-205ENST00000460547 MED1Q15648 1581 aaPredicted RBP22.43■■□□□ 1.18
YIPF3-205ENST00000460547 MINK1Q8N4C8 1332 aaPredicted RBP22.42■■□□□ 1.18
YIPF3-205ENST00000460547 COL16A1Q07092 1604 aaPredicted RBP22.41■■□□□ 1.18
YIPF3-205ENST00000460547 MORC1Q86VD1 984 aa22.41■■□□□ 1.18
YIPF3-205ENST00000460547 A0A1W2PP64 1363 aa22.4■■□□□ 1.18
YIPF3-205ENST00000460547 FOXO3O43524 673 aa22.39■■□□□ 1.18
YIPF3-205ENST00000460547 SRPK2P78362 688 aaKnown RBP22.39■■□□□ 1.18
YIPF3-205ENST00000460547 SPATA31A6Q5VVP1 1343 aa22.39■■□□□ 1.18
YIPF3-205ENST00000460547 NPHP3Q7Z494 1330 aa22.39■■□□□ 1.18
YIPF3-205ENST00000460547 CD163L1Q9NR16 1453 aa22.39■■□□□ 1.17
YIPF3-205ENST00000460547 SHPRHQ149N8 1683 aa22.39■■□□□ 1.17
YIPF3-205ENST00000460547 SENP3-EIF4A1A0A087X0R7 540 aa22.39■■□□□ 1.17
YIPF3-205ENST00000460547 ZNF521Q96K83 1311 aa22.38■■□□□ 1.17
YIPF3-205ENST00000460547 ANKRD26Q9UPS8 1709 aa22.37■■□□□ 1.17
YIPF3-205ENST00000460547 WASLO00401 505 aaPredicted RBP22.36■■□□□ 1.17
YIPF3-205ENST00000460547 NGEFQ8N5V2 710 aa22.36■■□□□ 1.17
YIPF3-205ENST00000460547 SOS2Q07890 1332 aaPredicted RBP22.36■■□□□ 1.17
YIPF3-205ENST00000460547 TERF2IPQ9NYB0 399 aa22.36■■□□□ 1.17
YIPF3-205ENST00000460547 NHSL1Q5SYE7 1610 aa22.35■■□□□ 1.17
YIPF3-205ENST00000460547 ATP7BP35670 1465 aa22.35■■□□□ 1.17
YIPF3-205ENST00000460547 PHF8Q9UPP1 1060 aa22.35■■□□□ 1.17
YIPF3-205ENST00000460547 NUTM2BA6NNL0 878 aaPredicted RBP22.34■■□□□ 1.17
YIPF3-205ENST00000460547 NUTM2EB1AL46 878 aaPredicted RBP22.34■■□□□ 1.17
YIPF3-205ENST00000460547 MEX3CQ5U5Q3 659 aaKnown RBP22.34■■□□□ 1.17
YIPF3-205ENST00000460547 NUTM2AQ8IVF1 878 aaPredicted RBP22.34■■□□□ 1.17
YIPF3-205ENST00000460547 RCAN3Q9UKA8 241 aa22.34■■□□□ 1.17
YIPF3-205ENST00000460547 SALL2Q9Y467 1007 aaPredicted RBP22.34■■□□□ 1.17
YIPF3-205ENST00000460547 CDK19Q9BWU1 502 aa22.33■■□□□ 1.17
YIPF3-205ENST00000460547 XPCQ01831 940 aaPredicted RBP22.33■■□□□ 1.16
YIPF3-205ENST00000460547 ILDR2Q71H61 639 aa22.33■■□□□ 1.16
YIPF3-205ENST00000460547 FMN2Q9NZ56 1722 aa22.32■■□□□ 1.16
YIPF3-205ENST00000460547 CDCA7LQ96GN5 454 aa22.32■■□□□ 1.16
YIPF3-205ENST00000460547 TSHZ2Q9NRE2 1034 aa22.31■■□□□ 1.16
YIPF3-205ENST00000460547 RRP1P56182 461 aaKnown RBP22.3■■□□□ 1.16
YIPF3-205ENST00000460547 PMFBP1Q8TBY8 1022 aa22.3■■□□□ 1.16
YIPF3-205ENST00000460547 ANKARQ7Z5J8 1434 aa22.3■■□□□ 1.16
YIPF3-205ENST00000460547 KRT28Q7Z3Y7 464 aa22.3■■□□□ 1.16
YIPF3-205ENST00000460547 ADGRB2O60241 1585 aa22.29■■□□□ 1.16
YIPF3-205ENST00000460547 PSME1Q06323 249 aa22.29■■□□□ 1.16
YIPF3-205ENST00000460547 HDGFL2Q7Z4V5 671 aaPredicted RBP22.29■■□□□ 1.16
YIPF3-205ENST00000460547 PNPLA6Q8IY17 1366 aa22.28■■□□□ 1.16
YIPF3-205ENST00000460547 CFAP53Q96M91 514 aa22.28■■□□□ 1.16
YIPF3-205ENST00000460547 KIF20BQ96Q89 1820 aa22.27■■□□□ 1.16
YIPF3-205ENST00000460547 GOLGA2Q08379 1002 aa22.26■■□□□ 1.15
YIPF3-205ENST00000460547 NUDT16Q96DE0 195 aaKnown RBP22.26■■□□□ 1.15
YIPF3-205ENST00000460547 RGS17Q9UGC6 210 aaPredicted RBP22.26■■□□□ 1.15
YIPF3-205ENST00000460547 MTHFSP49914 203 aa22.25■■□□□ 1.15
YIPF3-205ENST00000460547 PRR36Q9H6K5 1346 aa22.25■■□□□ 1.15
YIPF3-205ENST00000460547 PXDNQ92626 1479 aa22.24■■□□□ 1.15
YIPF3-205ENST00000460547 KIF1AQ12756 1690 aa22.24■■□□□ 1.15
YIPF3-205ENST00000460547 LRP6O75581 1613 aa22.24■■□□□ 1.15
YIPF3-205ENST00000460547 DUSP27Q5VZP5 1158 aa22.23■■□□□ 1.15
YIPF3-205ENST00000460547 CCDC146Q8IYE0 955 aa22.23■■□□□ 1.15
YIPF3-205ENST00000460547 NGDNQ8NEJ9 315 aaKnown RBP22.23■■□□□ 1.15
YIPF3-205ENST00000460547 CPSF1Q10570 1443 aaKnown RBP22.23■■□□□ 1.15
YIPF3-205ENST00000460547 APAF1O14727 1248 aa22.23■■□□□ 1.15
YIPF3-205ENST00000460547 FYB1O15117 783 aa22.23■■□□□ 1.15
YIPF3-205ENST00000460547 TNNT2P45379 298 aaPredicted RBP22.23■■□□□ 1.15
YIPF3-205ENST00000460547 CABP1Q9NZU7 370 aa22.23■■□□□ 1.15
YIPF3-205ENST00000460547 COL3A1P02461 1466 aaPredicted RBP22.23■■□□□ 1.15
YIPF3-205ENST00000460547 TRMT2AQ8IZ69 625 aaKnown RBP22.22■■□□□ 1.15
YIPF3-205ENST00000460547 SPATA31A3Q5VYP0 1347 aa22.22■■□□□ 1.15
YIPF3-205ENST00000460547 SLFN5Q08AF3 891 aa22.21■■□□□ 1.15
YIPF3-205ENST00000460547 NCBP3Q53F19 620 aaKnown RBP22.21■■□□□ 1.15
YIPF3-205ENST00000460547 LMOD2Q6P5Q4 547 aa22.21■■□□□ 1.15
YIPF3-205ENST00000460547 RGPD8O14715 1765 aaPredicted RBP22.2■■□□□ 1.15
YIPF3-205ENST00000460547 ADAMTS2O95450 1211 aa22.2■■□□□ 1.15
YIPF3-205ENST00000460547 CCDC61Q9Y6R9 512 aa22.2■■□□□ 1.15
YIPF3-205ENST00000460547 EDC4Q6P2E9 1401 aaKnown RBP22.2■■□□□ 1.14
YIPF3-205ENST00000460547 ZNF772Q68DY9 489 aaPredicted RBP22.2■■□□□ 1.14
YIPF3-205ENST00000460547 PPIP5K1Q6PFW1 1433 aa22.19■■□□□ 1.14
YIPF3-205ENST00000460547 B4GALNT3Q6L9W6 998 aa22.19■■□□□ 1.14
YIPF3-205ENST00000460547 RUNDC1Q96C34 613 aa22.19■■□□□ 1.14
YIPF3-205ENST00000460547 C8orf37Q96NL8 207 aa22.19■■□□□ 1.14
YIPF3-205ENST00000460547 GGNBP2Q9H3C7 697 aa22.18■■□□□ 1.14
YIPF3-205ENST00000460547 MON2Q7Z3U7 1717 aa22.18■■□□□ 1.14
YIPF3-205ENST00000460547 POTEAQ6S8J7 498 aa22.17■■□□□ 1.14
YIPF3-205ENST00000460547 NGLY1Q96IV0 654 aa22.17■■□□□ 1.14
YIPF3-205ENST00000460547 SBNO1A3KN83 1393 aa22.16■■□□□ 1.14
YIPF3-205ENST00000460547 E9PSI1 815 aa22.16■■□□□ 1.14
YIPF3-205ENST00000460547 PAK3O75914 559 aaPredicted RBP22.15■■□□□ 1.14
YIPF3-205ENST00000460547 HAP1P54257 671 aaPredicted RBP22.15■■□□□ 1.14
YIPF3-205ENST00000460547 TOPAZ1Q8N9V7 1692 aa22.15■■□□□ 1.14
YIPF3-205ENST00000460547 AKAP12Q02952 1782 aa22.14■■□□□ 1.14
YIPF3-205ENST00000460547 TNS3Q68CZ2 1445 aa22.14■■□□□ 1.14
YIPF3-205ENST00000460547 PLEKHG5O94827 1062 aa22.14■■□□□ 1.13
YIPF3-205ENST00000460547 AFF2P51816 1311 aa22.14■■□□□ 1.13
YIPF3-205ENST00000460547 PLEKHG3A1L390 1219 aa22.13■■□□□ 1.13
YIPF3-205ENST00000460547 ARHGEF10O15013 1369 aa22.13■■□□□ 1.13
YIPF3-205ENST00000460547 CCDC27Q2M243 656 aa22.13■■□□□ 1.13
YIPF3-205ENST00000460547 ITSN1Q15811 1721 aa22.12■■□□□ 1.13
YIPF3-205ENST00000460547 ACEP12821 1306 aa22.12■■□□□ 1.13
YIPF3-205ENST00000460547 SOCS7O14512 581 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms