RNA–Protein interactions for RNA: ENST00000460176.6

GARNL3-211, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-211ENST00000460176 FOXO3O43524 673 aa14.21□□□□□ -0.13
GARNL3-211ENST00000460176 A0A1W2PP64 1363 aa14.21□□□□□ -0.14
GARNL3-211ENST00000460176 ANKRD36BQ8N2N9 1353 aa14.21□□□□□ -0.14
GARNL3-211ENST00000460176 ALS2Q96Q42 1657 aa14.2□□□□□ -0.14
GARNL3-211ENST00000460176 NGDNQ8NEJ9 315 aaKnown RBP14.2□□□□□ -0.14
GARNL3-211ENST00000460176 DDX17Q92841 729 aaKnown RBP14.2□□□□□ -0.14
GARNL3-211ENST00000460176 USP6P35125 1406 aa14.2□□□□□ -0.14
GARNL3-211ENST00000460176 NPHP3Q7Z494 1330 aa14.19□□□□□ -0.14
GARNL3-211ENST00000460176 SSH2Q76I76 1423 aa14.19□□□□□ -0.14
GARNL3-211ENST00000460176 KTN1Q86UP2 1357 aaKnown RBP14.18□□□□□ -0.14
GARNL3-211ENST00000460176 KIF20BQ96Q89 1820 aa14.18□□□□□ -0.14
GARNL3-211ENST00000460176 SOS2Q07890 1332 aaPredicted RBP14.17□□□□□ -0.14
GARNL3-211ENST00000460176 PIK3C2AO00443 1686 aa14.17□□□□□ -0.14
GARNL3-211ENST00000460176 XPCQ01831 940 aaPredicted RBP14.17□□□□□ -0.14
GARNL3-211ENST00000460176 PSME1Q06323 249 aa14.17□□□□□ -0.14
GARNL3-211ENST00000460176 KRT28Q7Z3Y7 464 aa14.17□□□□□ -0.14
GARNL3-211ENST00000460176 HDGFL2Q7Z4V5 671 aaPredicted RBP14.17□□□□□ -0.14
GARNL3-211ENST00000460176 FBXO41Q8TF61 875 aa14.17□□□□□ -0.14
GARNL3-211ENST00000460176 ZNF692Q9BU19 519 aaPredicted RBP14.17□□□□□ -0.14
GARNL3-211ENST00000460176 TERF2IPQ9NYB0 399 aa14.17□□□□□ -0.14
GARNL3-211ENST00000460176 EDC4Q6P2E9 1401 aaKnown RBP14.16□□□□□ -0.14
GARNL3-211ENST00000460176 MARF1Q9Y4F3 1742 aaKnown RBP14.16□□□□□ -0.14
GARNL3-211ENST00000460176 CARD14Q9BXL6 1004 aa14.16□□□□□ -0.14
GARNL3-211ENST00000460176 SBNO1A3KN83 1393 aa14.16□□□□□ -0.14
GARNL3-211ENST00000460176 BRD4O60885 1362 aaPredicted RBP14.16□□□□□ -0.14
GARNL3-211ENST00000460176 USP54Q70EL1 1684 aa14.16□□□□□ -0.14
GARNL3-211ENST00000460176 CRYBG1Q9Y4K1 1723 aa14.15□□□□□ -0.14
GARNL3-211ENST00000460176 COL22A1Q8NFW1 1626 aaPredicted RBP14.15□□□□□ -0.14
GARNL3-211ENST00000460176 NSD3Q9BZ95 1437 aa14.15□□□□□ -0.14
GARNL3-211ENST00000460176 SHPRHQ149N8 1683 aa14.14□□□□□ -0.15
GARNL3-211ENST00000460176 PANK3Q9H999 370 aa14.14□□□□□ -0.15
GARNL3-211ENST00000460176 ABCA3Q99758 1704 aa14.14□□□□□ -0.15
GARNL3-211ENST00000460176 TNS3Q68CZ2 1445 aa14.14□□□□□ -0.15
GARNL3-211ENST00000460176 ANKRD26Q9UPS8 1709 aa14.13□□□□□ -0.15
GARNL3-211ENST00000460176 HSPA1LP34931 641 aa14.13□□□□□ -0.15
GARNL3-211ENST00000460176 SPATA31A3Q5VYP0 1347 aa14.13□□□□□ -0.15
GARNL3-211ENST00000460176 TTC21BQ7Z4L5 1316 aa14.13□□□□□ -0.15
GARNL3-211ENST00000460176 MED1Q15648 1581 aaPredicted RBP14.12□□□□□ -0.15
GARNL3-211ENST00000460176 TTC21AQ8NDW8 1320 aa14.12□□□□□ -0.15
GARNL3-211ENST00000460176 PHRF1Q9P1Y6 1649 aaKnown RBP14.12□□□□□ -0.15
GARNL3-211ENST00000460176 PER1O15534 1290 aaPredicted RBP14.1□□□□□ -0.15
GARNL3-211ENST00000460176 PAK3O75914 559 aaPredicted RBP14.1□□□□□ -0.15
GARNL3-211ENST00000460176 DDX10Q13206 875 aaKnown RBP14.1□□□□□ -0.15
GARNL3-211ENST00000460176 ARHGEF10O15013 1369 aa14.09□□□□□ -0.15
GARNL3-211ENST00000460176 PNPLA6Q8IY17 1366 aa14.09□□□□□ -0.15
GARNL3-211ENST00000460176 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.09□□□□□ -0.15
GARNL3-211ENST00000460176 LRRC59Q96AG4 307 aaKnown RBP14.09□□□□□ -0.15
GARNL3-211ENST00000460176 OVOS2A0A0J9YW53 1432 aa14.08□□□□□ -0.15
GARNL3-211ENST00000460176 OVOS2Q6IE36 1432 aa14.08□□□□□ -0.15
GARNL3-211ENST00000460176 SAMD1Q6SPF0 538 aaPredicted RBP14.08□□□□□ -0.16
GARNL3-211ENST00000460176 NME9Q86XW9 330 aa14.08□□□□□ -0.16
GARNL3-211ENST00000460176 SLIT3O75094 1523 aa14.08□□□□□ -0.16
GARNL3-211ENST00000460176 USP31Q70CQ4 1352 aa14.08□□□□□ -0.16
GARNL3-211ENST00000460176 ABTB2Q8N961 1025 aa14.07□□□□□ -0.16
GARNL3-211ENST00000460176 JCADQ9P266 1359 aa14.07□□□□□ -0.16
GARNL3-211ENST00000460176 FYB1O15117 783 aa14.06□□□□□ -0.16
GARNL3-211ENST00000460176 ZRANB1Q9UGI0 708 aa14.06□□□□□ -0.16
GARNL3-211ENST00000460176 CGNL1Q0VF96 1302 aa14.06□□□□□ -0.16
GARNL3-211ENST00000460176 AMER1Q5JTC6 1135 aaPredicted RBP14.05□□□□□ -0.16
GARNL3-211ENST00000460176 NUTM2GQ5VZR2 741 aa14.05□□□□□ -0.16
GARNL3-211ENST00000460176 LMOD2Q6P5Q4 547 aa14.05□□□□□ -0.16
GARNL3-211ENST00000460176 KNSTRNQ9Y448 316 aa14.05□□□□□ -0.16
GARNL3-211ENST00000460176 USP19O94966 1318 aa14.05□□□□□ -0.16
GARNL3-211ENST00000460176 NSD2O96028 1365 aa14.05□□□□□ -0.16
GARNL3-211ENST00000460176 GGNBP2Q9H3C7 697 aa14.04□□□□□ -0.16
GARNL3-211ENST00000460176 NPC1L1Q9UHC9 1359 aa14.04□□□□□ -0.16
GARNL3-211ENST00000460176 NFAT5O94916 1531 aa14.04□□□□□ -0.16
GARNL3-211ENST00000460176 NLRP6P59044 892 aa14.03□□□□□ -0.16
GARNL3-211ENST00000460176 NLRP13Q86W25 1043 aa14.03□□□□□ -0.16
GARNL3-211ENST00000460176 LTN1O94822 1766 aa14.02□□□□□ -0.16
GARNL3-211ENST00000460176 CABLES1Q8TDN4 633 aa14.02□□□□□ -0.17
GARNL3-211ENST00000460176 LRP6O75581 1613 aa14.01□□□□□ -0.17
GARNL3-211ENST00000460176 ILDR1Q86SU0 546 aaPredicted RBP14.01□□□□□ -0.17
GARNL3-211ENST00000460176 SPATA31A6Q5VVP1 1343 aa14□□□□□ -0.17
GARNL3-211ENST00000460176 COG3Q96JB2 828 aa14□□□□□ -0.17
GARNL3-211ENST00000460176 PLEKHG5O94827 1062 aa13.99□□□□□ -0.17
GARNL3-211ENST00000460176 CC2D1BQ5T0F9 858 aaKnown RBP13.99□□□□□ -0.17
GARNL3-211ENST00000460176 MAP2P11137 1827 aaKnown RBP13.99□□□□□ -0.17
GARNL3-211ENST00000460176 COL18A1P39060 1754 aa13.99□□□□□ -0.17
GARNL3-211ENST00000460176 GCP02774 474 aa13.98□□□□□ -0.17
GARNL3-211ENST00000460176 PEAK1Q9H792 1746 aa13.98□□□□□ -0.17
GARNL3-211ENST00000460176 KCNH5Q8NCM2 988 aa13.97□□□□□ -0.17
GARNL3-211ENST00000460176 PLCH1Q4KWH8 1693 aa13.97□□□□□ -0.17
GARNL3-211ENST00000460176 LMO7Q8WWI1 1683 aa13.97□□□□□ -0.17
GARNL3-211ENST00000460176 PARD3Q8TEW0 1356 aa13.96□□□□□ -0.17
GARNL3-211ENST00000460176 COL14A1Q05707 1796 aaKnown RBP13.96□□□□□ -0.17
GARNL3-211ENST00000460176 NUTM2BA6NNL0 878 aaPredicted RBP13.96□□□□□ -0.17
GARNL3-211ENST00000460176 NUTM2EB1AL46 878 aaPredicted RBP13.96□□□□□ -0.17
GARNL3-211ENST00000460176 CNGB1Q14028 1251 aaPredicted RBP13.96□□□□□ -0.17
GARNL3-211ENST00000460176 FKBP8Q14318 412 aa13.96□□□□□ -0.17
GARNL3-211ENST00000460176 MORC1Q86VD1 984 aa13.96□□□□□ -0.17
GARNL3-211ENST00000460176 NUTM2AQ8IVF1 878 aaPredicted RBP13.96□□□□□ -0.17
GARNL3-211ENST00000460176 RGPD5Q99666 1765 aa13.96□□□□□ -0.18
GARNL3-211ENST00000460176 CPDO75976 1380 aa13.96□□□□□ -0.18
GARNL3-211ENST00000460176 AATKQ6ZMQ8 1374 aa13.96□□□□□ -0.18
GARNL3-211ENST00000460176 ABCC6O95255 1503 aa13.95□□□□□ -0.18
GARNL3-211ENST00000460176 SOX12O15370 315 aa13.95□□□□□ -0.18
GARNL3-211ENST00000460176 HAP1P54257 671 aaPredicted RBP13.95□□□□□ -0.18
GARNL3-211ENST00000460176 KIAA0232Q92628 1395 aa13.95□□□□□ -0.18
GARNL3-211ENST00000460176 FBLN1P23142 703 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms