RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 NPHP3Q7Z494 1330 aa11.96□□□□□ -0.49
CLTCL1-204ENST00000458188 ZNF692Q9BU19 519 aaPredicted RBP11.96□□□□□ -0.49
CLTCL1-204ENST00000458188 CD163L1Q9NR16 1453 aa11.95□□□□□ -0.5
CLTCL1-204ENST00000458188 POLR3AO14802 1390 aaPredicted RBP11.95□□□□□ -0.5
CLTCL1-204ENST00000458188 NUTM2BA6NNL0 878 aaPredicted RBP11.95□□□□□ -0.5
CLTCL1-204ENST00000458188 NUTM2EB1AL46 878 aaPredicted RBP11.95□□□□□ -0.5
CLTCL1-204ENST00000458188 NUTM2AQ8IVF1 878 aaPredicted RBP11.95□□□□□ -0.5
CLTCL1-204ENST00000458188 ANKRD36BQ8N2N9 1353 aa11.94□□□□□ -0.5
CLTCL1-204ENST00000458188 LRP6O75581 1613 aa11.94□□□□□ -0.5
CLTCL1-204ENST00000458188 TTC21BQ7Z4L5 1316 aa11.94□□□□□ -0.5
CLTCL1-204ENST00000458188 NME9Q86XW9 330 aa11.94□□□□□ -0.5
CLTCL1-204ENST00000458188 RGPD8O14715 1765 aaPredicted RBP11.94□□□□□ -0.5
CLTCL1-204ENST00000458188 CPSF1Q10570 1443 aaKnown RBP11.94□□□□□ -0.5
CLTCL1-204ENST00000458188 SRCAPQ6ZRS2 3230 aa11.94□□□□□ -0.5
CLTCL1-204ENST00000458188 COL16A1Q07092 1604 aaPredicted RBP11.93□□□□□ -0.5
CLTCL1-204ENST00000458188 SOS2Q07890 1332 aaPredicted RBP11.93□□□□□ -0.5
CLTCL1-204ENST00000458188 ABTB2Q8N961 1025 aa11.93□□□□□ -0.5
CLTCL1-204ENST00000458188 CABLES1Q8TDN4 633 aa11.93□□□□□ -0.5
CLTCL1-204ENST00000458188 GGNBP2Q9H3C7 697 aa11.93□□□□□ -0.5
CLTCL1-204ENST00000458188 SOX12O15370 315 aa11.92□□□□□ -0.5
CLTCL1-204ENST00000458188 PER1O15534 1290 aaPredicted RBP11.92□□□□□ -0.5
CLTCL1-204ENST00000458188 RBM6P78332 1123 aaKnown RBP11.92□□□□□ -0.5
CLTCL1-204ENST00000458188 CC2D1BQ5T0F9 858 aaKnown RBP11.92□□□□□ -0.5
CLTCL1-204ENST00000458188 QTRT2Q9H974 415 aaKnown RBP11.92□□□□□ -0.5
CLTCL1-204ENST00000458188 KNSTRNQ9Y448 316 aa11.92□□□□□ -0.5
CLTCL1-204ENST00000458188 USP6P35125 1406 aa11.92□□□□□ -0.5
CLTCL1-204ENST00000458188 NSD3Q9BZ95 1437 aa11.92□□□□□ -0.5
CLTCL1-204ENST00000458188 NINLQ9Y2I6 1382 aa11.92□□□□□ -0.5
CLTCL1-204ENST00000458188 AFF2P51816 1311 aa11.91□□□□□ -0.5
CLTCL1-204ENST00000458188 FYB1O15117 783 aa11.91□□□□□ -0.5
CLTCL1-204ENST00000458188 FBLN1P23142 703 aa11.91□□□□□ -0.5
CLTCL1-204ENST00000458188 NLRP6P59044 892 aa11.91□□□□□ -0.5
CLTCL1-204ENST00000458188 LRRC59Q96AG4 307 aaKnown RBP11.91□□□□□ -0.5
CLTCL1-204ENST00000458188 SHPRHQ149N8 1683 aa11.91□□□□□ -0.5
CLTCL1-204ENST00000458188 SPATA31A3Q5VYP0 1347 aa11.9□□□□□ -0.5
CLTCL1-204ENST00000458188 PXDNQ92626 1479 aa11.9□□□□□ -0.5
CLTCL1-204ENST00000458188 NGLY1Q96IV0 654 aa11.9□□□□□ -0.5
CLTCL1-204ENST00000458188 TOPAZ1Q8N9V7 1692 aa11.9□□□□□ -0.5
CLTCL1-204ENST00000458188 SSH2Q76I76 1423 aa11.89□□□□□ -0.51
CLTCL1-204ENST00000458188 TNNT2P45379 298 aaPredicted RBP11.89□□□□□ -0.51
CLTCL1-204ENST00000458188 ZBTB7CA1YPR0 619 aa11.88□□□□□ -0.51
CLTCL1-204ENST00000458188 AMER1Q5JTC6 1135 aaPredicted RBP11.88□□□□□ -0.51
CLTCL1-204ENST00000458188 SBNO1A3KN83 1393 aa11.88□□□□□ -0.51
CLTCL1-204ENST00000458188 MYOM1P52179 1685 aa11.87□□□□□ -0.51
CLTCL1-204ENST00000458188 EDC4Q6P2E9 1401 aaKnown RBP11.87□□□□□ -0.51
CLTCL1-204ENST00000458188 COG3Q96JB2 828 aa11.87□□□□□ -0.51
CLTCL1-204ENST00000458188 CGNL1Q0VF96 1302 aa11.86□□□□□ -0.51
CLTCL1-204ENST00000458188 TTC21AQ8NDW8 1320 aa11.86□□□□□ -0.51
CLTCL1-204ENST00000458188 TNS3Q68CZ2 1445 aa11.86□□□□□ -0.51
CLTCL1-204ENST00000458188 HAP1P54257 671 aaPredicted RBP11.86□□□□□ -0.51
CLTCL1-204ENST00000458188 MORC1Q86VD1 984 aa11.86□□□□□ -0.51
CLTCL1-204ENST00000458188 NLRP13Q86W25 1043 aa11.86□□□□□ -0.51
CLTCL1-204ENST00000458188 C8orf37Q96NL8 207 aa11.86□□□□□ -0.51
CLTCL1-204ENST00000458188 KIF1AQ12756 1690 aa11.86□□□□□ -0.51
CLTCL1-204ENST00000458188 AHDC1Q5TGY3 1603 aaPredicted RBP11.86□□□□□ -0.51
CLTCL1-204ENST00000458188 RGS12O14924 1447 aa11.86□□□□□ -0.51
CLTCL1-204ENST00000458188 PNPLA6Q8IY17 1366 aa11.85□□□□□ -0.51
CLTCL1-204ENST00000458188 ADAMTS2O95450 1211 aa11.85□□□□□ -0.51
CLTCL1-204ENST00000458188 ZC3H6P61129 1189 aaKnown RBP11.85□□□□□ -0.51
CLTCL1-204ENST00000458188 ITSN1Q15811 1721 aa11.85□□□□□ -0.51
CLTCL1-204ENST00000458188 CCDC125Q86Z20 511 aa11.84□□□□□ -0.51
CLTCL1-204ENST00000458188 ARHGEF10O15013 1369 aa11.83□□□□□ -0.52
CLTCL1-204ENST00000458188 GCP02774 474 aa11.83□□□□□ -0.52
CLTCL1-204ENST00000458188 NHSL1Q5SYE7 1610 aa11.82□□□□□ -0.52
CLTCL1-204ENST00000458188 BRD4O60885 1362 aaPredicted RBP11.82□□□□□ -0.52
CLTCL1-204ENST00000458188 PPM1GO15355 546 aaPredicted RBP11.82□□□□□ -0.52
CLTCL1-204ENST00000458188 RRS1Q15050 365 aaKnown RBP11.82□□□□□ -0.52
CLTCL1-204ENST00000458188 CHRNA2Q15822 529 aa11.82□□□□□ -0.52
CLTCL1-204ENST00000458188 USP31Q70CQ4 1352 aa11.81□□□□□ -0.52
CLTCL1-204ENST00000458188 DIEXFQ68CQ4 756 aaKnown RBP11.81□□□□□ -0.52
CLTCL1-204ENST00000458188 AKAP12Q02952 1782 aa11.8□□□□□ -0.52
CLTCL1-204ENST00000458188 USP19O94966 1318 aa11.8□□□□□ -0.52
CLTCL1-204ENST00000458188 TRPM3Q9HCF6 1732 aaPredicted RBP11.8□□□□□ -0.52
CLTCL1-204ENST00000458188 FAM83GA6ND36 823 aa11.79□□□□□ -0.52
CLTCL1-204ENST00000458188 KCNH5Q8NCM2 988 aa11.79□□□□□ -0.52
CLTCL1-204ENST00000458188 EMILIN1Q9Y6C2 1016 aa11.79□□□□□ -0.52
CLTCL1-204ENST00000458188 MON2Q7Z3U7 1717 aa11.79□□□□□ -0.52
CLTCL1-204ENST00000458188 OVOS2A0A0J9YW53 1432 aa11.78□□□□□ -0.52
CLTCL1-204ENST00000458188 OVOS2Q6IE36 1432 aa11.78□□□□□ -0.52
CLTCL1-204ENST00000458188 ANP32CO43423 234 aa11.78□□□□□ -0.52
CLTCL1-204ENST00000458188 TRPC5Q9UL62 973 aaPredicted RBP11.78□□□□□ -0.52
CLTCL1-204ENST00000458188 NRKQ7Z2Y5 1582 aa11.78□□□□□ -0.52
CLTCL1-204ENST00000458188 KIAA0232Q92628 1395 aa11.78□□□□□ -0.52
CLTCL1-204ENST00000458188 PIK3C2AO00443 1686 aa11.78□□□□□ -0.52
CLTCL1-204ENST00000458188 PPP2R1AP30153 589 aa11.77□□□□□ -0.53
CLTCL1-204ENST00000458188 AMPHP49418 695 aa11.77□□□□□ -0.53
CLTCL1-204ENST00000458188 ARHGEF25Q86VW2 580 aa11.77□□□□□ -0.53
CLTCL1-204ENST00000458188 LTV1Q96GA3 475 aaPredicted RBP11.77□□□□□ -0.53
CLTCL1-204ENST00000458188 PRKRIP1Q9H875 184 aaPredicted RBP11.77□□□□□ -0.53
CLTCL1-204ENST00000458188 PRDM11Q9NQV5 511 aa11.77□□□□□ -0.53
CLTCL1-204ENST00000458188 POLKQ9UBT6 870 aa11.77□□□□□ -0.53
CLTCL1-204ENST00000458188 USP21Q9UK80 565 aa11.77□□□□□ -0.53
CLTCL1-204ENST00000458188 AXIN2Q9Y2T1 843 aa11.77□□□□□ -0.53
CLTCL1-204ENST00000458188 MAP3K19Q56UN5 1328 aa11.77□□□□□ -0.53
CLTCL1-204ENST00000458188 ALS2Q96Q42 1657 aa11.76□□□□□ -0.53
CLTCL1-204ENST00000458188 MTHFSP49914 203 aa11.76□□□□□ -0.53
CLTCL1-204ENST00000458188 NSD2O96028 1365 aa11.76□□□□□ -0.53
CLTCL1-204ENST00000458188 HSP90AB2PQ58FF8 381 aa11.75□□□□□ -0.53
CLTCL1-204ENST00000458188 NPC1L1Q9UHC9 1359 aa11.75□□□□□ -0.53
CLTCL1-204ENST00000458188 RALBP1Q15311 655 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms