RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 SLFN5Q08AF3 891 aa21.58■■□□□ 1.04
CAPN13-203ENST00000458085 B4GALNT3Q6L9W6 998 aa21.58■■□□□ 1.04
CAPN13-203ENST00000458085 RUNDC1Q96C34 613 aa21.58■■□□□ 1.04
CAPN13-203ENST00000458085 IQSEC2Q5JU85 1478 aa21.57■■□□□ 1.04
CAPN13-203ENST00000458085 U2AF1L5P0DN76 240 aaPredicted RBP21.57■■□□□ 1.04
CAPN13-203ENST00000458085 U2AF1Q01081 240 aaKnown RBP eCLIP21.57■■□□□ 1.04
CAPN13-203ENST00000458085 RRP7AQ9Y3A4 280 aaKnown RBP21.57■■□□□ 1.04
CAPN13-203ENST00000458085 ITSN1Q15811 1721 aa21.57■■□□□ 1.04
CAPN13-203ENST00000458085 TOPAZ1Q8N9V7 1692 aa21.56■■□□□ 1.04
CAPN13-203ENST00000458085 KCNA6P17658 529 aa21.56■■□□□ 1.04
CAPN13-203ENST00000458085 NKTRP30414 1462 aaKnown RBP21.56■■□□□ 1.04
CAPN13-203ENST00000458085 SETD1BQ9UPS6 1966 aaKnown RBP21.56■■□□□ 1.04
CAPN13-203ENST00000458085 TCP11L2Q8N4U5 519 aa21.55■■□□□ 1.04
CAPN13-203ENST00000458085 NEUROD2Q15784 382 aa21.55■■□□□ 1.04
CAPN13-203ENST00000458085 TRMT2AQ8IZ69 625 aaKnown RBP21.54■■□□□ 1.04
CAPN13-203ENST00000458085 POLKQ9UBT6 870 aa21.54■■□□□ 1.04
CAPN13-203ENST00000458085 PNPLA6Q8IY17 1366 aa21.54■■□□□ 1.04
CAPN13-203ENST00000458085 MAP2P11137 1827 aaKnown RBP21.53■■□□□ 1.04
CAPN13-203ENST00000458085 ANKLE2Q86XL3 938 aa21.53■■□□□ 1.04
CAPN13-203ENST00000458085 WWC1Q8IX03 1113 aa21.53■■□□□ 1.04
CAPN13-203ENST00000458085 ACEP12821 1306 aa21.53■■□□□ 1.04
CAPN13-203ENST00000458085 U2SURPO15042 1029 aaKnown RBP21.53■■□□□ 1.04
CAPN13-203ENST00000458085 PLIN1O60240 522 aa21.52■■□□□ 1.03
CAPN13-203ENST00000458085 ZNF692Q9BU19 519 aaPredicted RBP21.52■■□□□ 1.03
CAPN13-203ENST00000458085 PLEKHG3A1L390 1219 aa21.51■■□□□ 1.03
CAPN13-203ENST00000458085 NGEFQ8N5V2 710 aa21.51■■□□□ 1.03
CAPN13-203ENST00000458085 PPM1GO15355 546 aaPredicted RBP21.5■■□□□ 1.03
CAPN13-203ENST00000458085 RGPD8O14715 1765 aaPredicted RBP21.5■■□□□ 1.03
CAPN13-203ENST00000458085 EMILIN1Q9Y6C2 1016 aa21.5■■□□□ 1.03
CAPN13-203ENST00000458085 NRKQ7Z2Y5 1582 aa21.5■■□□□ 1.03
CAPN13-203ENST00000458085 TSHZ2Q9NRE2 1034 aa21.49■■□□□ 1.03
CAPN13-203ENST00000458085 PIK3R4Q99570 1358 aa21.49■■□□□ 1.03
CAPN13-203ENST00000458085 DIAPH1O60610 1272 aaKnown RBP21.49■■□□□ 1.03
CAPN13-203ENST00000458085 PLEKHF1Q96S99 279 aa21.49■■□□□ 1.03
CAPN13-203ENST00000458085 PHF23Q9BUL5 403 aaPredicted RBP21.49■■□□□ 1.03
CAPN13-203ENST00000458085 E9PSI1 815 aa21.48■■□□□ 1.03
CAPN13-203ENST00000458085 PMFBP1Q8TBY8 1022 aa21.48■■□□□ 1.03
CAPN13-203ENST00000458085 COG3Q96JB2 828 aa21.48■■□□□ 1.03
CAPN13-203ENST00000458085 TTC21BQ7Z4L5 1316 aa21.47■■□□□ 1.03
CAPN13-203ENST00000458085 EXOC6Q8TAG9 804 aa21.47■■□□□ 1.03
CAPN13-203ENST00000458085 USP6P35125 1406 aa21.47■■□□□ 1.03
CAPN13-203ENST00000458085 CHD2O14647 1828 aaKnown RBP21.46■■□□□ 1.03
CAPN13-203ENST00000458085 RRS1Q15050 365 aaKnown RBP21.45■■□□□ 1.02
CAPN13-203ENST00000458085 RBM33Q96EV2 1170 aaKnown RBP21.45■■□□□ 1.02
CAPN13-203ENST00000458085 AATKQ6ZMQ8 1374 aa21.44■■□□□ 1.02
CAPN13-203ENST00000458085 SSH2Q76I76 1423 aa21.43■■□□□ 1.02
CAPN13-203ENST00000458085 CCDC27Q2M243 656 aa21.42■■□□□ 1.02
CAPN13-203ENST00000458085 C20orf194Q5TEA3 1177 aa21.41■■□□□ 1.02
CAPN13-203ENST00000458085 OVOS2A0A0J9YW53 1432 aa21.41■■□□□ 1.02
CAPN13-203ENST00000458085 OVOS2Q6IE36 1432 aa21.41■■□□□ 1.02
CAPN13-203ENST00000458085 CCDC136Q96JN2 1154 aa21.4■■□□□ 1.02
CAPN13-203ENST00000458085 CDK12Q9NYV4 1490 aaPredicted RBP21.4■■□□□ 1.02
CAPN13-203ENST00000458085 TMPOP42166 694 aaKnown RBP21.4■■□□□ 1.02
CAPN13-203ENST00000458085 NPHP4O75161 1426 aaPredicted RBP21.4■■□□□ 1.02
CAPN13-203ENST00000458085 NALCNQ8IZF0 1738 aa21.4■■□□□ 1.02
CAPN13-203ENST00000458085 FMN2Q9NZ56 1722 aa21.4■■□□□ 1.02
CAPN13-203ENST00000458085 LRRC7Q96NW7 1537 aa21.39■■□□□ 1.02
CAPN13-203ENST00000458085 WDR63Q8IWG1 891 aa21.39■■□□□ 1.02
CAPN13-203ENST00000458085 IL13P35225 146 aa21.39■■□□□ 1.01
CAPN13-203ENST00000458085 NGDNQ8NEJ9 315 aaKnown RBP21.39■■□□□ 1.01
CAPN13-203ENST00000458085 CRBNQ96SW2 442 aa21.38■■□□□ 1.01
CAPN13-203ENST00000458085 RSPH6AQ9H0K4 717 aa21.38■■□□□ 1.01
CAPN13-203ENST00000458085 TRIM35Q9UPQ4 493 aa21.38■■□□□ 1.01
CAPN13-203ENST00000458085 MAPK8IP3Q9UPT6 1336 aa21.37■■□□□ 1.01
CAPN13-203ENST00000458085 BCAR3O75815 825 aa21.37■■□□□ 1.01
CAPN13-203ENST00000458085 NCBP3Q53F19 620 aaKnown RBP21.37■■□□□ 1.01
CAPN13-203ENST00000458085 ANKARQ7Z5J8 1434 aa21.37■■□□□ 1.01
CAPN13-203ENST00000458085 HMOX1P09601 288 aa21.36■■□□□ 1.01
CAPN13-203ENST00000458085 FCHSD2O94868 740 aa21.36■■□□□ 1.01
CAPN13-203ENST00000458085 PRKAR2BP31323 418 aa21.35■■□□□ 1.01
CAPN13-203ENST00000458085 SOX12O15370 315 aa21.34■■□□□ 1.01
CAPN13-203ENST00000458085 PHACTR3Q96KR7 559 aa21.33■■□□□ 1.01
CAPN13-203ENST00000458085 TTC21AQ8NDW8 1320 aa21.33■■□□□ 1
CAPN13-203ENST00000458085 USP31Q70CQ4 1352 aa21.33■■□□□ 1
CAPN13-203ENST00000458085 RIPK4P57078 832 aa21.32■■□□□ 1
CAPN13-203ENST00000458085 PEAK1Q9H792 1746 aa21.32■■□□□ 1
CAPN13-203ENST00000458085 PIK3C2AO00443 1686 aa21.31■■□□□ 1
CAPN13-203ENST00000458085 PNNQ9H307 717 aaKnown RBP21.3■■□□□ 1
CAPN13-203ENST00000458085 ADGRL3Q9HAR2 1447 aa21.29■■□□□ 1
CAPN13-203ENST00000458085 TSR2Q969E8 191 aaKnown RBP21.29■■□□□ 1
CAPN13-203ENST00000458085 EIF4A2Q14240 407 aaKnown RBP21.28■■□□□ 1
CAPN13-203ENST00000458085 HSP90AB2PQ58FF8 381 aa21.27■■□□□ 1
CAPN13-203ENST00000458085 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.27■■□□□ 1
CAPN13-203ENST00000458085 MYH16Q9H6N6 1097 aa21.27■■□□□ 1
CAPN13-203ENST00000458085 NUTM2GQ5VZR2 741 aa21.27■■□□□ 1
CAPN13-203ENST00000458085 FANCIQ9NVI1 1328 aa21.26■□□□□ 0.99
CAPN13-203ENST00000458085 MAP3K19Q56UN5 1328 aa21.26■□□□□ 0.99
CAPN13-203ENST00000458085 RARSP54136 660 aaKnown RBP21.26■□□□□ 0.99
CAPN13-203ENST00000458085 PHF8Q9UPP1 1060 aa21.26■□□□□ 0.99
CAPN13-203ENST00000458085 MARF1Q9Y4F3 1742 aaKnown RBP21.25■□□□□ 0.99
CAPN13-203ENST00000458085 NLRP6P59044 892 aa21.25■□□□□ 0.99
CAPN13-203ENST00000458085 NWD1Q149M9 1564 aa21.25■□□□□ 0.99
CAPN13-203ENST00000458085 AEBP1Q8IUX7 1158 aa21.25■□□□□ 0.99
CAPN13-203ENST00000458085 NFE2L2Q16236 605 aa21.24■□□□□ 0.99
CAPN13-203ENST00000458085 C14orf37Q86TY3 774 aa21.24■□□□□ 0.99
CAPN13-203ENST00000458085 BCL2L13Q9BXK5 485 aa21.23■□□□□ 0.99
CAPN13-203ENST00000458085 PAK3O75914 559 aaPredicted RBP21.22■□□□□ 0.99
CAPN13-203ENST00000458085 NEFMP07197 916 aa21.22■□□□□ 0.99
CAPN13-203ENST00000458085 ESCO1Q5FWF5 840 aa21.22■□□□□ 0.99
CAPN13-203ENST00000458085 THUMPD2Q9BTF0 503 aaKnown RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms