RNA–Protein interactions for RNA: ENST00000456257.1

ERCC3-204, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-204ENST00000456257 TRMT2AQ8IZ69 625 aaKnown RBP9.99□□□□□ -0.81
ERCC3-204ENST00000456257 CFAP53Q96M91 514 aa9.99□□□□□ -0.81
ERCC3-204ENST00000456257 C19orf44Q9H6X5 657 aa9.99□□□□□ -0.81
ERCC3-204ENST00000456257 GTF3C3Q9Y5Q9 886 aa9.99□□□□□ -0.81
ERCC3-204ENST00000456257 RNF123Q5XPI4 1314 aa9.99□□□□□ -0.81
ERCC3-204ENST00000456257 LMTK3Q96Q04 1460 aa9.98□□□□□ -0.81
ERCC3-204ENST00000456257 NME9Q86XW9 330 aa9.98□□□□□ -0.81
ERCC3-204ENST00000456257 MON2Q7Z3U7 1717 aa9.98□□□□□ -0.81
ERCC3-204ENST00000456257 AKAP12Q02952 1782 aa9.98□□□□□ -0.81
ERCC3-204ENST00000456257 COL3A1P02461 1466 aaPredicted RBP9.98□□□□□ -0.81
ERCC3-204ENST00000456257 ANKRD26Q9UPS8 1709 aa9.97□□□□□ -0.81
ERCC3-204ENST00000456257 CCDC27Q2M243 656 aa9.97□□□□□ -0.81
ERCC3-204ENST00000456257 ILDR1Q86SU0 546 aaPredicted RBP9.97□□□□□ -0.81
ERCC3-204ENST00000456257 PROSER2Q86WR7 435 aaPredicted RBP9.97□□□□□ -0.81
ERCC3-204ENST00000456257 OVOS2A0A0J9YW53 1432 aa9.97□□□□□ -0.81
ERCC3-204ENST00000456257 OVOS2Q6IE36 1432 aa9.97□□□□□ -0.81
ERCC3-204ENST00000456257 FMN2Q9NZ56 1722 aa9.96□□□□□ -0.81
ERCC3-204ENST00000456257 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.96□□□□□ -0.82
ERCC3-204ENST00000456257 RUNDC1Q96C34 613 aa9.96□□□□□ -0.82
ERCC3-204ENST00000456257 COG3Q96JB2 828 aa9.96□□□□□ -0.82
ERCC3-204ENST00000456257 PLEKHF1Q96S99 279 aa9.96□□□□□ -0.82
ERCC3-204ENST00000456257 NUDCQ9Y266 331 aa9.96□□□□□ -0.82
ERCC3-204ENST00000456257 DCCP43146 1447 aa9.96□□□□□ -0.82
ERCC3-204ENST00000456257 MST1RQ04912 1400 aa9.96□□□□□ -0.82
ERCC3-204ENST00000456257 FCHSD2O94868 740 aa9.95□□□□□ -0.82
ERCC3-204ENST00000456257 ERICH6BQ5W0A0 696 aa9.95□□□□□ -0.82
ERCC3-204ENST00000456257 ZRANB1Q9UGI0 708 aa9.95□□□□□ -0.82
ERCC3-204ENST00000456257 PHF8Q9UPP1 1060 aa9.95□□□□□ -0.82
ERCC3-204ENST00000456257 NRKQ7Z2Y5 1582 aa9.94□□□□□ -0.82
ERCC3-204ENST00000456257 KIF24Q5T7B8 1368 aa9.94□□□□□ -0.82
ERCC3-204ENST00000456257 IL13P35225 146 aa9.94□□□□□ -0.82
ERCC3-204ENST00000456257 TNNT2P45379 298 aaPredicted RBP9.94□□□□□ -0.82
ERCC3-204ENST00000456257 HSPA2P54652 639 aa9.94□□□□□ -0.82
ERCC3-204ENST00000456257 NGDNQ8NEJ9 315 aaKnown RBP9.94□□□□□ -0.82
ERCC3-204ENST00000456257 DIAPH1O60610 1272 aaKnown RBP9.93□□□□□ -0.82
ERCC3-204ENST00000456257 PMFBP1Q8TBY8 1022 aa9.93□□□□□ -0.82
ERCC3-204ENST00000456257 SHPRHQ149N8 1683 aa9.93□□□□□ -0.82
ERCC3-204ENST00000456257 LRRC7Q96NW7 1537 aa9.92□□□□□ -0.82
ERCC3-204ENST00000456257 APAF1O14727 1248 aa9.92□□□□□ -0.82
ERCC3-204ENST00000456257 SLFN5Q08AF3 891 aa9.92□□□□□ -0.82
ERCC3-204ENST00000456257 WDR63Q8IWG1 891 aa9.92□□□□□ -0.82
ERCC3-204ENST00000456257 PNNQ9H307 717 aaKnown RBP9.92□□□□□ -0.82
ERCC3-204ENST00000456257 STRCQ7RTU9 1775 aa9.92□□□□□ -0.82
ERCC3-204ENST00000456257 ITSN1Q15811 1721 aa9.92□□□□□ -0.82
ERCC3-204ENST00000456257 NALCNQ8IZF0 1738 aa9.92□□□□□ -0.82
ERCC3-204ENST00000456257 C1orf167Q5SNV9 1468 aa9.91□□□□□ -0.82
ERCC3-204ENST00000456257 CDK12Q9NYV4 1490 aaPredicted RBP9.91□□□□□ -0.82
ERCC3-204ENST00000456257 KIF20BQ96Q89 1820 aa9.91□□□□□ -0.82
ERCC3-204ENST00000456257 TMEM94Q12767 1356 aa9.91□□□□□ -0.82
ERCC3-204ENST00000456257 USP54Q70EL1 1684 aa9.91□□□□□ -0.82
ERCC3-204ENST00000456257 NUTM2FA1L443 756 aa9.91□□□□□ -0.82
ERCC3-204ENST00000456257 FBLN1P23142 703 aa9.91□□□□□ -0.82
ERCC3-204ENST00000456257 CACNB1Q02641 598 aaPredicted RBP9.91□□□□□ -0.82
ERCC3-204ENST00000456257 DUSP27Q5VZP5 1158 aa9.91□□□□□ -0.82
ERCC3-204ENST00000456257 CADPS2Q86UW7 1296 aa9.91□□□□□ -0.82
ERCC3-204ENST00000456257 WWC1Q8IX03 1113 aa9.91□□□□□ -0.82
ERCC3-204ENST00000456257 TCP11L2Q8N4U5 519 aa9.91□□□□□ -0.82
ERCC3-204ENST00000456257 U2AF1L5P0DN76 240 aaPredicted RBP9.9□□□□□ -0.82
ERCC3-204ENST00000456257 U2AF1Q01081 240 aaKnown RBP eCLIP9.9□□□□□ -0.82
ERCC3-204ENST00000456257 GOLGA2Q08379 1002 aa9.9□□□□□ -0.82
ERCC3-204ENST00000456257 SUPT16HQ9Y5B9 1047 aaKnown RBP9.9□□□□□ -0.82
ERCC3-204ENST00000456257 EMILIN1Q9Y6C2 1016 aa9.9□□□□□ -0.82
ERCC3-204ENST00000456257 ESCO1Q5FWF5 840 aa9.89□□□□□ -0.83
ERCC3-204ENST00000456257 RBM33Q96EV2 1170 aaKnown RBP9.89□□□□□ -0.83
ERCC3-204ENST00000456257 CDCA7LQ96GN5 454 aa9.89□□□□□ -0.83
ERCC3-204ENST00000456257 ORAI2Q96SN7 254 aa9.89□□□□□ -0.83
ERCC3-204ENST00000456257 RSPH6AQ9H0K4 717 aa9.89□□□□□ -0.83
ERCC3-204ENST00000456257 IQSEC2Q5JU85 1478 aa9.89□□□□□ -0.83
ERCC3-204ENST00000456257 RGPD8O14715 1765 aaPredicted RBP9.88□□□□□ -0.83
ERCC3-204ENST00000456257 MAP3K19Q56UN5 1328 aa9.88□□□□□ -0.83
ERCC3-204ENST00000456257 E9PSI1 815 aa9.88□□□□□ -0.83
ERCC3-204ENST00000456257 TMPOP42166 694 aaKnown RBP9.88□□□□□ -0.83
ERCC3-204ENST00000456257 NLRP6P59044 892 aa9.88□□□□□ -0.83
ERCC3-204ENST00000456257 PSME1Q06323 249 aa9.88□□□□□ -0.83
ERCC3-204ENST00000456257 STRCP1A6NGW2 1772 aa9.88□□□□□ -0.83
ERCC3-204ENST00000456257 SBNO1A3KN83 1393 aa9.88□□□□□ -0.83
ERCC3-204ENST00000456257 IL16Q14005 1332 aa9.87□□□□□ -0.83
ERCC3-204ENST00000456257 ATF3P18847 181 aa9.87□□□□□ -0.83
ERCC3-204ENST00000456257 RRS1Q15050 365 aaKnown RBP9.87□□□□□ -0.83
ERCC3-204ENST00000456257 CCDC146Q8IYE0 955 aa9.87□□□□□ -0.83
ERCC3-204ENST00000456257 MAP2P11137 1827 aaKnown RBP9.86□□□□□ -0.83
ERCC3-204ENST00000456257 USP19O94966 1318 aa9.86□□□□□ -0.83
ERCC3-204ENST00000456257 FOXO3O43524 673 aa9.86□□□□□ -0.83
ERCC3-204ENST00000456257 EIF4A2Q14240 407 aaKnown RBP9.86□□□□□ -0.83
ERCC3-204ENST00000456257 KRT28Q7Z3Y7 464 aa9.86□□□□□ -0.83
ERCC3-204ENST00000456257 ABTB2Q8N961 1025 aa9.86□□□□□ -0.83
ERCC3-204ENST00000456257 SPINK5Q9NQ38 1064 aaPredicted RBP9.86□□□□□ -0.83
ERCC3-204ENST00000456257 TRIM35Q9UPQ4 493 aa9.86□□□□□ -0.83
ERCC3-204ENST00000456257 C14orf37Q86TY3 774 aa9.85□□□□□ -0.83
ERCC3-204ENST00000456257 KCNH5Q8NCM2 988 aa9.85□□□□□ -0.83
ERCC3-204ENST00000456257 IP6K1Q92551 441 aa9.85□□□□□ -0.83
ERCC3-204ENST00000456257 RCAN3Q9UKA8 241 aa9.85□□□□□ -0.83
ERCC3-204ENST00000456257 PIK3C2AO00443 1686 aa9.85□□□□□ -0.83
ERCC3-204ENST00000456257 FLT4P35916 1363 aa9.85□□□□□ -0.83
ERCC3-204ENST00000456257 U2SURPO15042 1029 aaKnown RBP9.84□□□□□ -0.83
ERCC3-204ENST00000456257 HSP90AB2PQ58FF8 381 aa9.84□□□□□ -0.83
ERCC3-204ENST00000456257 ARHGEF25Q86VW2 580 aa9.84□□□□□ -0.83
ERCC3-204ENST00000456257 RTL1A6NKG5 1358 aa9.84□□□□□ -0.83
ERCC3-204ENST00000456257 KDRP35968 1356 aa9.84□□□□□ -0.83
ERCC3-204ENST00000456257 MSH6P52701 1360 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms