RNA–Protein interactions for RNA: ENST00000455551.6

SEMA4D-213, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 3,594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-213ENST00000455551 FTSJ3Q8IY81 847 aaKnown RBP15.69■□□□□ 0.1
SEMA4D-213ENST00000455551 SMC4Q9NTJ3 1288 aa15.69■□□□□ 0.1
SEMA4D-213ENST00000455551 ADGRB2O60241 1585 aa15.69■□□□□ 0.1
SEMA4D-213ENST00000455551 DIAPH1O60610 1272 aaKnown RBP15.69■□□□□ 0.1
SEMA4D-213ENST00000455551 COL3A1P02461 1466 aaPredicted RBP15.68■□□□□ 0.1
SEMA4D-213ENST00000455551 RIPK4P57078 832 aa15.68■□□□□ 0.1
SEMA4D-213ENST00000455551 NLRP1Q9C000 1473 aa15.68■□□□□ 0.1
SEMA4D-213ENST00000455551 ZKSCAN2Q63HK3 967 aa15.67■□□□□ 0.1
SEMA4D-213ENST00000455551 PMFBP1Q8TBY8 1022 aa15.67■□□□□ 0.1
SEMA4D-213ENST00000455551 SEC24BO95487 1268 aa15.66■□□□□ 0.1
SEMA4D-213ENST00000455551 ARHGEF40Q8TER5 1519 aa15.66■□□□□ 0.1
SEMA4D-213ENST00000455551 CLTCQ00610 1675 aaKnown RBP15.66■□□□□ 0.1
SEMA4D-213ENST00000455551 DZIP1LQ8IYY4 767 aaKnown RBP15.66■□□□□ 0.1
SEMA4D-213ENST00000455551 MVPQ14764 893 aaKnown RBP15.65■□□□□ 0.1
SEMA4D-213ENST00000455551 SSH1Q8WYL5 1049 aa15.65■□□□□ 0.1
SEMA4D-213ENST00000455551 PDZRN3Q9UPQ7 1066 aa15.65■□□□□ 0.1
SEMA4D-213ENST00000455551 RIMS2Q9UQ26 1411 aa15.65■□□□□ 0.1
SEMA4D-213ENST00000455551 DIP2BQ9P265 1576 aa15.64■□□□□ 0.09
SEMA4D-213ENST00000455551 A2ML1A8K2U0 1454 aa15.64■□□□□ 0.09
SEMA4D-213ENST00000455551 HMOX1P09601 288 aa15.63■□□□□ 0.09
SEMA4D-213ENST00000455551 TRIM27P14373 513 aa15.63■□□□□ 0.09
SEMA4D-213ENST00000455551 ANKRD26Q9UPS8 1709 aa15.63■□□□□ 0.09
SEMA4D-213ENST00000455551 PRKAR2BP31323 418 aa15.63■□□□□ 0.09
SEMA4D-213ENST00000455551 ITPRIPQ8IWB1 547 aa15.63■□□□□ 0.09
SEMA4D-213ENST00000455551 RWDD1Q9H446 243 aaPredicted RBP15.62■□□□□ 0.09
SEMA4D-213ENST00000455551 NCKAP5LQ9HCH0 1330 aa15.62■□□□□ 0.09
SEMA4D-213ENST00000455551 NCBP3Q53F19 620 aaKnown RBP15.62■□□□□ 0.09
SEMA4D-213ENST00000455551 TXNDC2Q86VQ3 553 aa15.62■□□□□ 0.09
SEMA4D-213ENST00000455551 POLKQ9UBT6 870 aa15.62■□□□□ 0.09
SEMA4D-213ENST00000455551 ZRANB1Q9UGI0 708 aa15.62■□□□□ 0.09
SEMA4D-213ENST00000455551 MED14O60244 1454 aa15.62■□□□□ 0.09
SEMA4D-213ENST00000455551 NOB1Q9ULX3 412 aaKnown RBP15.61■□□□□ 0.09
SEMA4D-213ENST00000455551 RIMBP3CA6NJZ7 1639 aa15.61■□□□□ 0.09
SEMA4D-213ENST00000455551 RIMBP3BA6NNM3 1639 aa15.61■□□□□ 0.09
SEMA4D-213ENST00000455551 RIMBP3Q9UFD9 1639 aa15.61■□□□□ 0.09
SEMA4D-213ENST00000455551 USP19O94966 1318 aa15.61■□□□□ 0.09
SEMA4D-213ENST00000455551 EMILIN1Q9Y6C2 1016 aa15.61■□□□□ 0.09
SEMA4D-213ENST00000455551 NME9Q86XW9 330 aa15.61■□□□□ 0.09
SEMA4D-213ENST00000455551 THUMPD2Q9BTF0 503 aaKnown RBP15.6■□□□□ 0.09
SEMA4D-213ENST00000455551 KIF20BQ96Q89 1820 aa15.6■□□□□ 0.09
SEMA4D-213ENST00000455551 AAMPQ13685 434 aa15.6■□□□□ 0.09
SEMA4D-213ENST00000455551 PNPLA6Q8IY17 1366 aa15.6■□□□□ 0.09
SEMA4D-213ENST00000455551 NFKBIBQ15653 356 aa15.6■□□□□ 0.09
SEMA4D-213ENST00000455551 USP35Q9P2H5 1018 aa15.6■□□□□ 0.09
SEMA4D-213ENST00000455551 CT47B1P0C2W7 299 aaPredicted RBP15.59■□□□□ 0.09
SEMA4D-213ENST00000455551 ESF1Q9H501 851 aaKnown RBP15.59■□□□□ 0.09
SEMA4D-213ENST00000455551 ATF7IPQ6VMQ6 1270 aa15.59■□□□□ 0.09
SEMA4D-213ENST00000455551 METP08581 1390 aa15.59■□□□□ 0.09
SEMA4D-213ENST00000455551 LRRC7Q96NW7 1537 aa15.59■□□□□ 0.09
SEMA4D-213ENST00000455551 PHACTR3Q96KR7 559 aa15.59■□□□□ 0.09
SEMA4D-213ENST00000455551 RSPH6AQ9H0K4 717 aa15.58■□□□□ 0.08
SEMA4D-213ENST00000455551 VIRMAQ69YN4 1812 aaKnown RBP15.58■□□□□ 0.08
SEMA4D-213ENST00000455551 FCHSD2O94868 740 aa15.58■□□□□ 0.08
SEMA4D-213ENST00000455551 TMEM57Q8N5G2 664 aa15.58■□□□□ 0.08
SEMA4D-213ENST00000455551 WASLO00401 505 aaPredicted RBP15.57■□□□□ 0.08
SEMA4D-213ENST00000455551 PNNQ9H307 717 aaKnown RBP15.57■□□□□ 0.08
SEMA4D-213ENST00000455551 PPIP5K1Q6PFW1 1433 aa15.57■□□□□ 0.08
SEMA4D-213ENST00000455551 IL16Q14005 1332 aa15.57■□□□□ 0.08
SEMA4D-213ENST00000455551 SPATA31D1Q6ZQQ2 1576 aa15.57■□□□□ 0.08
SEMA4D-213ENST00000455551 AGLP35573 1532 aa15.57■□□□□ 0.08
SEMA4D-213ENST00000455551 PPP6R1Q9UPN7 881 aa15.56■□□□□ 0.08
SEMA4D-213ENST00000455551 RRS1Q15050 365 aaKnown RBP15.56■□□□□ 0.08
SEMA4D-213ENST00000455551 DDX19BQ9UMR2 479 aa15.56■□□□□ 0.08
SEMA4D-213ENST00000455551 ATP7BP35670 1465 aa15.56■□□□□ 0.08
SEMA4D-213ENST00000455551 MAP2P11137 1827 aaKnown RBP15.55■□□□□ 0.08
SEMA4D-213ENST00000455551 DLC1Q96QB1 1528 aa15.55■□□□□ 0.08
SEMA4D-213ENST00000455551 NUDT16Q96DE0 195 aaKnown RBP15.55■□□□□ 0.08
SEMA4D-213ENST00000455551 ELL2O00472 640 aaPredicted RBP15.55■□□□□ 0.08
SEMA4D-213ENST00000455551 SETD1AO15047 1707 aaKnown RBP15.54■□□□□ 0.08
SEMA4D-213ENST00000455551 FAM135BQ49AJ0 1406 aa15.54■□□□□ 0.08
SEMA4D-213ENST00000455551 RTN4Q9NQC3 1192 aaKnown RBP15.54■□□□□ 0.08
SEMA4D-213ENST00000455551 NUTM2FA1L443 756 aa15.54■□□□□ 0.08
SEMA4D-213ENST00000455551 REREQ9P2R6 1566 aa15.53■□□□□ 0.08
SEMA4D-213ENST00000455551 ZMYM3Q14202 1370 aa15.53■□□□□ 0.08
SEMA4D-213ENST00000455551 NFE2L2Q16236 605 aa15.53■□□□□ 0.08
SEMA4D-213ENST00000455551 KIF16BQ96L93 1317 aa15.53■□□□□ 0.08
SEMA4D-213ENST00000455551 UPF2Q9HAU5 1272 aaKnown RBP15.52■□□□□ 0.08
SEMA4D-213ENST00000455551 NRXN3Q9Y4C0 1643 aa15.52■□□□□ 0.07
SEMA4D-213ENST00000455551 EDC4Q6P2E9 1401 aaKnown RBP15.52■□□□□ 0.07
SEMA4D-213ENST00000455551 FRAT2O75474 233 aaPredicted RBP15.52■□□□□ 0.07
SEMA4D-213ENST00000455551 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.52■□□□□ 0.07
SEMA4D-213ENST00000455551 COG3Q96JB2 828 aa15.52■□□□□ 0.07
SEMA4D-213ENST00000455551 IPO8O15397 1037 aaKnown RBP15.51■□□□□ 0.07
SEMA4D-213ENST00000455551 IL13P35225 146 aa15.51■□□□□ 0.07
SEMA4D-213ENST00000455551 TSPYL6Q8N831 410 aa15.51■□□□□ 0.07
SEMA4D-213ENST00000455551 SLKQ9H2G2 1235 aaPredicted RBP15.51■□□□□ 0.07
SEMA4D-213ENST00000455551 CPSF1Q10570 1443 aaKnown RBP15.51■□□□□ 0.07
SEMA4D-213ENST00000455551 CCDC61Q9Y6R9 512 aa15.5■□□□□ 0.07
SEMA4D-213ENST00000455551 CPS1P31327 1500 aa15.5■□□□□ 0.07
SEMA4D-213ENST00000455551 HDAC1Q13547 482 aaPredicted RBP15.5■□□□□ 0.07
SEMA4D-213ENST00000455551 ZBTB40Q9NUA8 1239 aa15.5■□□□□ 0.07
SEMA4D-213ENST00000455551 CDC42BPGQ6DT37 1551 aa15.5■□□□□ 0.07
SEMA4D-213ENST00000455551 FAM83GA6ND36 823 aa15.49■□□□□ 0.07
SEMA4D-213ENST00000455551 BECN1Q14457 450 aa15.49■□□□□ 0.07
SEMA4D-213ENST00000455551 PLPPR3Q6T4P5 718 aa15.49■□□□□ 0.07
SEMA4D-213ENST00000455551 DCTN1Q14203 1278 aa15.49■□□□□ 0.07
SEMA4D-213ENST00000455551 ALDH1L2Q3SY69 923 aa15.49■□□□□ 0.07
SEMA4D-213ENST00000455551 TBC1D32Q96NH3 1257 aa15.49■□□□□ 0.07
SEMA4D-213ENST00000455551 C1orf115Q9H7X2 142 aa15.49■□□□□ 0.07
SEMA4D-213ENST00000455551 PRR36Q9H6K5 1346 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms