RNA–Protein interactions for RNA: ENST00000454964.3

ATXN3-205, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-205ENST00000454964 ANKRD36BQ8N2N9 1353 aa13.06□□□□□ -0.32
ATXN3-205ENST00000454964 CPSF1Q10570 1443 aaKnown RBP13.05□□□□□ -0.32
ATXN3-205ENST00000454964 AKAP12Q02952 1782 aa13.05□□□□□ -0.32
ATXN3-205ENST00000454964 ILDR1Q86SU0 546 aaPredicted RBP13.05□□□□□ -0.32
ATXN3-205ENST00000454964 ABTB2Q8N961 1025 aa13.05□□□□□ -0.32
ATXN3-205ENST00000454964 POLR3GLQ9BT43 218 aa13.04□□□□□ -0.32
ATXN3-205ENST00000454964 USP6P35125 1406 aa13.04□□□□□ -0.32
ATXN3-205ENST00000454964 EDC4Q6P2E9 1401 aaKnown RBP13.04□□□□□ -0.32
ATXN3-205ENST00000454964 PXDNQ92626 1479 aa13.04□□□□□ -0.32
ATXN3-205ENST00000454964 COL16A1Q07092 1604 aaPredicted RBP13.03□□□□□ -0.32
ATXN3-205ENST00000454964 LMOD2Q6P5Q4 547 aa13.03□□□□□ -0.32
ATXN3-205ENST00000454964 KCNH5Q8NCM2 988 aa13.03□□□□□ -0.32
ATXN3-205ENST00000454964 WASHC2AQ641Q2 1341 aa13.03□□□□□ -0.32
ATXN3-205ENST00000454964 TNS3Q68CZ2 1445 aa13.03□□□□□ -0.32
ATXN3-205ENST00000454964 SHPRHQ149N8 1683 aa13.02□□□□□ -0.32
ATXN3-205ENST00000454964 HAP1P54257 671 aaPredicted RBP13.02□□□□□ -0.33
ATXN3-205ENST00000454964 KNSTRNQ9Y448 316 aa13.02□□□□□ -0.33
ATXN3-205ENST00000454964 CGNL1Q0VF96 1302 aa13.02□□□□□ -0.33
ATXN3-205ENST00000454964 KIF7Q2M1P5 1343 aa13.02□□□□□ -0.33
ATXN3-205ENST00000454964 TTC21BQ7Z4L5 1316 aa13.02□□□□□ -0.33
ATXN3-205ENST00000454964 CCDC7Q96M83 1385 aa13.01□□□□□ -0.33
ATXN3-205ENST00000454964 MON2Q7Z3U7 1717 aa13.01□□□□□ -0.33
ATXN3-205ENST00000454964 NLRP6P59044 892 aa13□□□□□ -0.33
ATXN3-205ENST00000454964 TRPM3Q9HCF6 1732 aaPredicted RBP12.99□□□□□ -0.33
ATXN3-205ENST00000454964 COL22A1Q8NFW1 1626 aaPredicted RBP12.99□□□□□ -0.33
ATXN3-205ENST00000454964 A0A1W2PP64 1363 aa12.99□□□□□ -0.33
ATXN3-205ENST00000454964 COG3Q96JB2 828 aa12.99□□□□□ -0.33
ATXN3-205ENST00000454964 PANK3Q9H999 370 aa12.99□□□□□ -0.33
ATXN3-205ENST00000454964 SSH2Q76I76 1423 aa12.98□□□□□ -0.33
ATXN3-205ENST00000454964 NSD2O96028 1365 aa12.98□□□□□ -0.33
ATXN3-205ENST00000454964 USP31Q70CQ4 1352 aa12.98□□□□□ -0.33
ATXN3-205ENST00000454964 PNPLA6Q8IY17 1366 aa12.98□□□□□ -0.33
ATXN3-205ENST00000454964 ZNF316A6NFI3 1004 aaPredicted RBP12.98□□□□□ -0.33
ATXN3-205ENST00000454964 XPCQ01831 940 aaPredicted RBP12.98□□□□□ -0.33
ATXN3-205ENST00000454964 DDX17Q92841 729 aaKnown RBP12.98□□□□□ -0.33
ATXN3-205ENST00000454964 ALS2Q96Q42 1657 aa12.98□□□□□ -0.33
ATXN3-205ENST00000454964 C11orf95C9JLR9 678 aaPredicted RBP12.97□□□□□ -0.33
ATXN3-205ENST00000454964 MEX3CQ5U5Q3 659 aaKnown RBP12.96□□□□□ -0.33
ATXN3-205ENST00000454964 CD163L1Q9NR16 1453 aa12.96□□□□□ -0.34
ATXN3-205ENST00000454964 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.95□□□□□ -0.34
ATXN3-205ENST00000454964 MYOM1P52179 1685 aa12.95□□□□□ -0.34
ATXN3-205ENST00000454964 NPC1L1Q9UHC9 1359 aa12.94□□□□□ -0.34
ATXN3-205ENST00000454964 FYB1O15117 783 aa12.94□□□□□ -0.34
ATXN3-205ENST00000454964 GCP02774 474 aa12.94□□□□□ -0.34
ATXN3-205ENST00000454964 MED1Q15648 1581 aaPredicted RBP12.94□□□□□ -0.34
ATXN3-205ENST00000454964 USP19O94966 1318 aa12.93□□□□□ -0.34
ATXN3-205ENST00000454964 POTEDQ86YR6 584 aa12.93□□□□□ -0.34
ATXN3-205ENST00000454964 NRKQ7Z2Y5 1582 aa12.93□□□□□ -0.34
ATXN3-205ENST00000454964 USP54Q70EL1 1684 aa12.93□□□□□ -0.34
ATXN3-205ENST00000454964 NUTM2BA6NNL0 878 aaPredicted RBP12.92□□□□□ -0.34
ATXN3-205ENST00000454964 NUTM2EB1AL46 878 aaPredicted RBP12.92□□□□□ -0.34
ATXN3-205ENST00000454964 ZNF772Q68DY9 489 aaPredicted RBP12.92□□□□□ -0.34
ATXN3-205ENST00000454964 NUTM2AQ8IVF1 878 aaPredicted RBP12.92□□□□□ -0.34
ATXN3-205ENST00000454964 CARD14Q9BXL6 1004 aa12.92□□□□□ -0.34
ATXN3-205ENST00000454964 MARF1Q9Y4F3 1742 aaKnown RBP12.92□□□□□ -0.34
ATXN3-205ENST00000454964 KIF20BQ96Q89 1820 aa12.92□□□□□ -0.34
ATXN3-205ENST00000454964 KIF24Q5T7B8 1368 aa12.92□□□□□ -0.34
ATXN3-205ENST00000454964 NSD3Q9BZ95 1437 aa12.91□□□□□ -0.34
ATXN3-205ENST00000454964 PER1O15534 1290 aaPredicted RBP12.91□□□□□ -0.34
ATXN3-205ENST00000454964 NGLY1Q96IV0 654 aa12.91□□□□□ -0.34
ATXN3-205ENST00000454964 CPDO75976 1380 aa12.91□□□□□ -0.34
ATXN3-205ENST00000454964 NME9Q86XW9 330 aa12.9□□□□□ -0.34
ATXN3-205ENST00000454964 PIK3C2AO00443 1686 aa12.89□□□□□ -0.35
ATXN3-205ENST00000454964 PRDM11Q9NQV5 511 aa12.89□□□□□ -0.35
ATXN3-205ENST00000454964 ADAMTS2O95450 1211 aa12.88□□□□□ -0.35
ATXN3-205ENST00000454964 NUTM2GQ5VZR2 741 aa12.88□□□□□ -0.35
ATXN3-205ENST00000454964 MORC1Q86VD1 984 aa12.88□□□□□ -0.35
ATXN3-205ENST00000454964 FNBP4Q8N3X1 1017 aaPredicted RBP12.88□□□□□ -0.35
ATXN3-205ENST00000454964 ANKRD26Q9UPS8 1709 aa12.88□□□□□ -0.35
ATXN3-205ENST00000454964 SLIT3O75094 1523 aa12.88□□□□□ -0.35
ATXN3-205ENST00000454964 ABCC6O95255 1503 aa12.88□□□□□ -0.35
ATXN3-205ENST00000454964 COL14A1Q05707 1796 aaKnown RBP12.87□□□□□ -0.35
ATXN3-205ENST00000454964 AATKQ6ZMQ8 1374 aa12.87□□□□□ -0.35
ATXN3-205ENST00000454964 EVA1CP58658 441 aa12.87□□□□□ -0.35
ATXN3-205ENST00000454964 ARHGEF25Q86VW2 580 aa12.87□□□□□ -0.35
ATXN3-205ENST00000454964 GGNBP2Q9H3C7 697 aa12.87□□□□□ -0.35
ATXN3-205ENST00000454964 OVOS2A0A0J9YW53 1432 aa12.87□□□□□ -0.35
ATXN3-205ENST00000454964 OVOS2Q6IE36 1432 aa12.87□□□□□ -0.35
ATXN3-205ENST00000454964 MAP2P11137 1827 aaKnown RBP12.86□□□□□ -0.35
ATXN3-205ENST00000454964 NWD2Q9ULI1 1742 aa12.86□□□□□ -0.35
ATXN3-205ENST00000454964 DDX10Q13206 875 aaKnown RBP12.86□□□□□ -0.35
ATXN3-205ENST00000454964 RALBP1Q15311 655 aa12.86□□□□□ -0.35
ATXN3-205ENST00000454964 AMER1Q5JTC6 1135 aaPredicted RBP12.86□□□□□ -0.35
ATXN3-205ENST00000454964 CABLES1Q8TDN4 633 aa12.86□□□□□ -0.35
ATXN3-205ENST00000454964 C8orf37Q96NL8 207 aa12.86□□□□□ -0.35
ATXN3-205ENST00000454964 PHRF1Q9P1Y6 1649 aaKnown RBP12.86□□□□□ -0.35
ATXN3-205ENST00000454964 CRYBG1Q9Y4K1 1723 aa12.85□□□□□ -0.35
ATXN3-205ENST00000454964 AMPHP49418 695 aa12.85□□□□□ -0.35
ATXN3-205ENST00000454964 ZC3H6P61129 1189 aaKnown RBP12.85□□□□□ -0.35
ATXN3-205ENST00000454964 USP21Q9UK80 565 aa12.85□□□□□ -0.35
ATXN3-205ENST00000454964 TRPC5Q9UL62 973 aaPredicted RBP12.85□□□□□ -0.35
ATXN3-205ENST00000454964 ABCA3Q99758 1704 aa12.85□□□□□ -0.35
ATXN3-205ENST00000454964 FAM83GA6ND36 823 aa12.84□□□□□ -0.35
ATXN3-205ENST00000454964 UNC5CLQ8IV45 518 aa12.84□□□□□ -0.35
ATXN3-205ENST00000454964 IP6K1Q92551 441 aa12.84□□□□□ -0.35
ATXN3-205ENST00000454964 RTL1A6NKG5 1358 aa12.83□□□□□ -0.36
ATXN3-205ENST00000454964 KIAA0232Q92628 1395 aa12.83□□□□□ -0.36
ATXN3-205ENST00000454964 BLMP54132 1417 aaPredicted RBP12.83□□□□□ -0.36
ATXN3-205ENST00000454964 BTG4Q9NY30 223 aa12.82□□□□□ -0.36
ATXN3-205ENST00000454964 THRAP3Q9Y2W1 955 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms