RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 USP31Q70CQ4 1352 aa9.09□□□□□ -0.95
ECHDC1-210ENST00000454859 FYB1O15117 783 aa9.09□□□□□ -0.95
ECHDC1-210ENST00000454859 SLC26A8Q96RN1 970 aa9.09□□□□□ -0.95
ECHDC1-210ENST00000454859 NUDCQ9Y266 331 aa9.09□□□□□ -0.95
ECHDC1-210ENST00000454859 MAP2P11137 1827 aaKnown RBP9.08□□□□□ -0.96
ECHDC1-210ENST00000454859 CDK12Q9NYV4 1490 aaPredicted RBP9.08□□□□□ -0.96
ECHDC1-210ENST00000454859 USP6P35125 1406 aa9.08□□□□□ -0.96
ECHDC1-210ENST00000454859 SAFB2Q14151 953 aaKnown RBP eCLIP9.08□□□□□ -0.96
ECHDC1-210ENST00000454859 NEFLP07196 543 aa9.07□□□□□ -0.96
ECHDC1-210ENST00000454859 COL3A1P02461 1466 aaPredicted RBP9.07□□□□□ -0.96
ECHDC1-210ENST00000454859 GTF3C3Q9Y5Q9 886 aa9.06□□□□□ -0.96
ECHDC1-210ENST00000454859 CCDC27Q2M243 656 aa9.06□□□□□ -0.96
ECHDC1-210ENST00000454859 MST1RQ04912 1400 aa9.06□□□□□ -0.96
ECHDC1-210ENST00000454859 RGPD8O14715 1765 aaPredicted RBP9.06□□□□□ -0.96
ECHDC1-210ENST00000454859 PRR36Q9H6K5 1346 aa9.06□□□□□ -0.96
ECHDC1-210ENST00000454859 OVOS2A0A0J9YW53 1432 aa9.05□□□□□ -0.96
ECHDC1-210ENST00000454859 OVOS2Q6IE36 1432 aa9.05□□□□□ -0.96
ECHDC1-210ENST00000454859 MAPK8IP2Q13387 824 aaPredicted RBP9.05□□□□□ -0.96
ECHDC1-210ENST00000454859 ADAMTS8Q9UP79 889 aa9.05□□□□□ -0.96
ECHDC1-210ENST00000454859 RNF123Q5XPI4 1314 aa9.04□□□□□ -0.96
ECHDC1-210ENST00000454859 MTHFSP49914 203 aa9.04□□□□□ -0.96
ECHDC1-210ENST00000454859 RUNDC1Q96C34 613 aa9.04□□□□□ -0.96
ECHDC1-210ENST00000454859 COG3Q96JB2 828 aa9.04□□□□□ -0.96
ECHDC1-210ENST00000454859 PHRF1Q9P1Y6 1649 aaKnown RBP9.04□□□□□ -0.96
ECHDC1-210ENST00000454859 ACEP12821 1306 aa9.04□□□□□ -0.96
ECHDC1-210ENST00000454859 TTC21BQ7Z4L5 1316 aa9.04□□□□□ -0.96
ECHDC1-210ENST00000454859 ZNF521Q96K83 1311 aa9.03□□□□□ -0.96
ECHDC1-210ENST00000454859 PPP4R3CPQ6ZMV5 832 aa9.03□□□□□ -0.96
ECHDC1-210ENST00000454859 IQSEC2Q5JU85 1478 aa9.03□□□□□ -0.96
ECHDC1-210ENST00000454859 LMTK3Q96Q04 1460 aa9.03□□□□□ -0.96
ECHDC1-210ENST00000454859 PELP1Q8IZL8 1130 aaKnown RBP9.02□□□□□ -0.97
ECHDC1-210ENST00000454859 STRCQ7RTU9 1775 aa9.02□□□□□ -0.97
ECHDC1-210ENST00000454859 FCHSD2O94868 740 aa9.02□□□□□ -0.97
ECHDC1-210ENST00000454859 DIAPH1O60610 1272 aaKnown RBP9.01□□□□□ -0.97
ECHDC1-210ENST00000454859 WDR63Q8IWG1 891 aa9.01□□□□□ -0.97
ECHDC1-210ENST00000454859 C19orf44Q9H6X5 657 aa9.01□□□□□ -0.97
ECHDC1-210ENST00000454859 DMRT2Q9Y5R5 561 aa9.01□□□□□ -0.97
ECHDC1-210ENST00000454859 PIK3C2AO00443 1686 aa9.01□□□□□ -0.97
ECHDC1-210ENST00000454859 RTL1A6NKG5 1358 aa9.01□□□□□ -0.97
ECHDC1-210ENST00000454859 GGNBP2Q9H3C7 697 aa9□□□□□ -0.97
ECHDC1-210ENST00000454859 IL16Q14005 1332 aa9□□□□□ -0.97
ECHDC1-210ENST00000454859 ABCC6O95255 1503 aa9□□□□□ -0.97
ECHDC1-210ENST00000454859 E9PSI1 815 aa9□□□□□ -0.97
ECHDC1-210ENST00000454859 GOLGA2Q08379 1002 aa9□□□□□ -0.97
ECHDC1-210ENST00000454859 TRMT2AQ8IZ69 625 aaKnown RBP9□□□□□ -0.97
ECHDC1-210ENST00000454859 POLKQ9UBT6 870 aa9□□□□□ -0.97
ECHDC1-210ENST00000454859 MARF1Q9Y4F3 1742 aaKnown RBP8.99□□□□□ -0.97
ECHDC1-210ENST00000454859 NEFMP07197 916 aa8.99□□□□□ -0.97
ECHDC1-210ENST00000454859 CT47B1P0C2W7 299 aaPredicted RBP8.99□□□□□ -0.97
ECHDC1-210ENST00000454859 NGDNQ8NEJ9 315 aaKnown RBP8.99□□□□□ -0.97
ECHDC1-210ENST00000454859 NCKAP5LQ9HCH0 1330 aa8.99□□□□□ -0.97
ECHDC1-210ENST00000454859 PLEKHG2Q9H7P9 1386 aa8.99□□□□□ -0.97
ECHDC1-210ENST00000454859 RGPD1P0DJD0 1748 aa8.99□□□□□ -0.97
ECHDC1-210ENST00000454859 PHF8Q9UPP1 1060 aa8.99□□□□□ -0.97
ECHDC1-210ENST00000454859 CALD1Q05682 793 aaKnown RBP8.98□□□□□ -0.97
ECHDC1-210ENST00000454859 CNGB1Q14028 1251 aaPredicted RBP8.98□□□□□ -0.97
ECHDC1-210ENST00000454859 TRPM3Q9HCF6 1732 aaPredicted RBP8.98□□□□□ -0.97
ECHDC1-210ENST00000454859 STRCP1A6NGW2 1772 aa8.98□□□□□ -0.97
ECHDC1-210ENST00000454859 KDM4FA0A1W2PPD8 638 aa8.98□□□□□ -0.97
ECHDC1-210ENST00000454859 PROSER2Q86WR7 435 aaPredicted RBP8.98□□□□□ -0.97
ECHDC1-210ENST00000454859 SBNO1A3KN83 1393 aa8.98□□□□□ -0.97
ECHDC1-210ENST00000454859 CADPS2Q86UW7 1296 aa8.97□□□□□ -0.97
ECHDC1-210ENST00000454859 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.97□□□□□ -0.975e-7■■■□□ 18.9
ECHDC1-210ENST00000454859 SLFN5Q08AF3 891 aa8.97□□□□□ -0.97
ECHDC1-210ENST00000454859 LMOD3Q0VAK6 560 aa8.97□□□□□ -0.97
ECHDC1-210ENST00000454859 NME9Q86XW9 330 aa8.97□□□□□ -0.97
ECHDC1-210ENST00000454859 KCNH5Q8NCM2 988 aa8.97□□□□□ -0.97
ECHDC1-210ENST00000454859 FLT4P35916 1363 aa8.96□□□□□ -0.97
ECHDC1-210ENST00000454859 C1orf167Q5SNV9 1468 aa8.96□□□□□ -0.97
ECHDC1-210ENST00000454859 SLIT3O75094 1523 aa8.96□□□□□ -0.97
ECHDC1-210ENST00000454859 XIRP1Q702N8 1843 aaKnown RBP8.96□□□□□ -0.97
ECHDC1-210ENST00000454859 POTEHQ6S545 545 aa8.96□□□□□ -0.97
ECHDC1-210ENST00000454859 PLEKHF1Q96S99 279 aa8.96□□□□□ -0.97
ECHDC1-210ENST00000454859 MAPK8IP3Q9UPT6 1336 aa8.96□□□□□ -0.98
ECHDC1-210ENST00000454859 ARHGEF10O15013 1369 aa8.96□□□□□ -0.98
ECHDC1-210ENST00000454859 U2AF1L5P0DN76 240 aaPredicted RBP8.96□□□□□ -0.98
ECHDC1-210ENST00000454859 U2AF1Q01081 240 aaKnown RBP eCLIP8.96□□□□□ -0.98
ECHDC1-210ENST00000454859 PSME1Q06323 249 aa8.96□□□□□ -0.98
ECHDC1-210ENST00000454859 MSH6P52701 1360 aa8.95□□□□□ -0.98
ECHDC1-210ENST00000454859 ALS2Q96Q42 1657 aa8.95□□□□□ -0.98
ECHDC1-210ENST00000454859 APAF1O14727 1248 aa8.95□□□□□ -0.98
ECHDC1-210ENST00000454859 IL13P35225 146 aa8.95□□□□□ -0.98
ECHDC1-210ENST00000454859 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.95□□□□□ -0.98
ECHDC1-210ENST00000454859 ZNF428Q96B54 188 aa8.95□□□□□ -0.98
ECHDC1-210ENST00000454859 MYH16Q9H6N6 1097 aa8.95□□□□□ -0.98
ECHDC1-210ENST00000454859 RCAN3Q9UKA8 241 aa8.95□□□□□ -0.98
ECHDC1-210ENST00000454859 SUPT16HQ9Y5B9 1047 aaKnown RBP8.95□□□□□ -0.98
ECHDC1-210ENST00000454859 ATF3P18847 181 aa8.94□□□□□ -0.98
ECHDC1-210ENST00000454859 WWC1Q8IX03 1113 aa8.94□□□□□ -0.98
ECHDC1-210ENST00000454859 TCP11L2Q8N4U5 519 aa8.94□□□□□ -0.98
ECHDC1-210ENST00000454859 MED1Q15648 1581 aaPredicted RBP8.94□□□□□ -0.98
ECHDC1-210ENST00000454859 TNNT2P45379 298 aaPredicted RBP8.94□□□□□ -0.98
ECHDC1-210ENST00000454859 AAMPQ13685 434 aa8.94□□□□□ -0.98
ECHDC1-210ENST00000454859 DUSP27Q5VZP5 1158 aa8.94□□□□□ -0.98
ECHDC1-210ENST00000454859 LTN1O94822 1766 aa8.94□□□□□ -0.98
ECHDC1-210ENST00000454859 PEAK1Q9H792 1746 aa8.94□□□□□ -0.98
ECHDC1-210ENST00000454859 FAM208AQ9UK61 1670 aaKnown RBP8.94□□□□□ -0.98
ECHDC1-210ENST00000454859 NFAT5O94916 1531 aa8.94□□□□□ -0.98
ECHDC1-210ENST00000454859 TMEM94Q12767 1356 aa8.93□□□□□ -0.98
ECHDC1-210ENST00000454859 KDRP35968 1356 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms