RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 MS4A1P11836 297 aa13.95□□□□□ -0.18
GTF3C2-206ENST00000454704 RBM6P78332 1123 aaKnown RBP13.95□□□□□ -0.18
GTF3C2-206ENST00000454704 NGLY1Q96IV0 654 aa13.94□□□□□ -0.18
GTF3C2-206ENST00000454704 SOS2Q07890 1332 aaPredicted RBP13.94□□□□□ -0.18
GTF3C2-206ENST00000454704 ANP32AP39687 249 aaKnown RBP13.93□□□□□ -0.18
GTF3C2-206ENST00000454704 RPGRIP1LQ68CZ1 1315 aa13.92□□□□□ -0.18
GTF3C2-206ENST00000454704 CDC42BPGQ6DT37 1551 aa13.92□□□□□ -0.18
GTF3C2-206ENST00000454704 COL22A1Q8NFW1 1626 aaPredicted RBP13.92□□□□□ -0.18
GTF3C2-206ENST00000454704 PPP2R1AP30153 589 aa13.9□□□□□ -0.18
GTF3C2-206ENST00000454704 CNGB1Q14028 1251 aaPredicted RBP13.9□□□□□ -0.18
GTF3C2-206ENST00000454704 WDR43Q15061 677 aaKnown RBP eCLIP13.9□□□□□ -0.18
GTF3C2-206ENST00000454704 AMER1Q5JTC6 1135 aaPredicted RBP13.9□□□□□ -0.18
GTF3C2-206ENST00000454704 CC2D1BQ5T0F9 858 aaKnown RBP13.9□□□□□ -0.18
GTF3C2-206ENST00000454704 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.9□□□□□ -0.19
GTF3C2-206ENST00000454704 USP21Q9UK80 565 aa13.9□□□□□ -0.19
GTF3C2-206ENST00000454704 QRICH2Q9H0J4 1663 aa13.89□□□□□ -0.19
GTF3C2-206ENST00000454704 NOP58Q9Y2X3 529 aaKnown RBP13.89□□□□□ -0.19
GTF3C2-206ENST00000454704 SRCAPQ6ZRS2 3230 aa13.88□□□□□ -0.19
GTF3C2-206ENST00000454704 PXDNQ92626 1479 aa13.88□□□□□ -0.19
GTF3C2-206ENST00000454704 ESCO1Q5FWF5 840 aa13.88□□□□□ -0.19
GTF3C2-206ENST00000454704 ATRNO75882 1429 aa13.87□□□□□ -0.19
GTF3C2-206ENST00000454704 ATAD2Q6PL18 1390 aa13.87□□□□□ -0.19
GTF3C2-206ENST00000454704 NPHP3Q7Z494 1330 aa13.87□□□□□ -0.19
GTF3C2-206ENST00000454704 ADGRF5Q8IZF2 1346 aa13.87□□□□□ -0.19
GTF3C2-206ENST00000454704 ZNF521Q96K83 1311 aa13.87□□□□□ -0.19
GTF3C2-206ENST00000454704 XPCQ01831 940 aaPredicted RBP13.87□□□□□ -0.19
GTF3C2-206ENST00000454704 PUS7Q96PZ0 661 aaKnown RBP13.87□□□□□ -0.19
GTF3C2-206ENST00000454704 TRPC5Q9UL62 973 aaPredicted RBP13.87□□□□□ -0.19
GTF3C2-206ENST00000454704 NINLQ9Y2I6 1382 aa13.86□□□□□ -0.19
GTF3C2-206ENST00000454704 EP400Q96L91 3159 aa13.86□□□□□ -0.19
GTF3C2-206ENST00000454704 MARF1Q9Y4F3 1742 aaKnown RBP13.86□□□□□ -0.19
GTF3C2-206ENST00000454704 FNBP4Q8N3X1 1017 aaPredicted RBP13.86□□□□□ -0.19
GTF3C2-206ENST00000454704 IPO9Q96P70 1041 aaKnown RBP13.86□□□□□ -0.19
GTF3C2-206ENST00000454704 TECPR2O15040 1411 aa13.86□□□□□ -0.19
GTF3C2-206ENST00000454704 EXOC6Q8TAG9 804 aa13.85□□□□□ -0.19
GTF3C2-206ENST00000454704 STK26Q9P289 416 aa13.85□□□□□ -0.19
GTF3C2-206ENST00000454704 KNDC1Q76NI1 1749 aa13.85□□□□□ -0.19
GTF3C2-206ENST00000454704 NUTM2FA1L443 756 aa13.84□□□□□ -0.19
GTF3C2-206ENST00000454704 WAPLQ7Z5K2 1190 aa13.84□□□□□ -0.19
GTF3C2-206ENST00000454704 POLR3AO14802 1390 aaPredicted RBP13.84□□□□□ -0.19
GTF3C2-206ENST00000454704 PLEKHH1Q9ULM0 1364 aa13.84□□□□□ -0.19
GTF3C2-206ENST00000454704 BCL9LQ86UU0 1499 aa13.84□□□□□ -0.19
GTF3C2-206ENST00000454704 FOXO3O43524 673 aa13.83□□□□□ -0.2
GTF3C2-206ENST00000454704 GOLGA2Q08379 1002 aa13.83□□□□□ -0.2
GTF3C2-206ENST00000454704 NCBP3Q53F19 620 aaKnown RBP13.83□□□□□ -0.2
GTF3C2-206ENST00000454704 ADAMTS8Q9UP79 889 aa13.83□□□□□ -0.2
GTF3C2-206ENST00000454704 FMN2Q9NZ56 1722 aa13.83□□□□□ -0.2
GTF3C2-206ENST00000454704 ADGRB1O14514 1584 aa13.82□□□□□ -0.2
GTF3C2-206ENST00000454704 TMEM132EQ6IEE7 984 aa13.81□□□□□ -0.2
GTF3C2-206ENST00000454704 VIRMAQ69YN4 1812 aaKnown RBP13.81□□□□□ -0.2
GTF3C2-206ENST00000454704 KIF1AQ12756 1690 aa13.81□□□□□ -0.2
GTF3C2-206ENST00000454704 ARHGEF28Q8N1W1 1705 aaKnown RBP13.81□□□□□ -0.2
GTF3C2-206ENST00000454704 DUSP27Q5VZP5 1158 aa13.81□□□□□ -0.2
GTF3C2-206ENST00000454704 TRMT2AQ8IZ69 625 aaKnown RBP13.81□□□□□ -0.2
GTF3C2-206ENST00000454704 NSD2O96028 1365 aa13.81□□□□□ -0.2
GTF3C2-206ENST00000454704 ABCC11Q96J66 1382 aa13.81□□□□□ -0.2
GTF3C2-206ENST00000454704 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.8□□□□□ -0.2
GTF3C2-206ENST00000454704 CDCA7LQ96GN5 454 aa13.8□□□□□ -0.2
GTF3C2-206ENST00000454704 ZBTB47Q9UFB7 747 aaPredicted RBP13.8□□□□□ -0.2
GTF3C2-206ENST00000454704 YTHDC2Q9H6S0 1430 aaKnown RBP13.79□□□□□ -0.2
GTF3C2-206ENST00000454704 CENPJQ9HC77 1338 aaPredicted RBP13.79□□□□□ -0.2
GTF3C2-206ENST00000454704 AAMPQ13685 434 aa13.79□□□□□ -0.2
GTF3C2-206ENST00000454704 CENPQQ7L2Z9 268 aaPredicted RBP13.79□□□□□ -0.2
GTF3C2-206ENST00000454704 E9PSI1 815 aa13.78□□□□□ -0.2
GTF3C2-206ENST00000454704 SLFN5Q08AF3 891 aa13.78□□□□□ -0.2
GTF3C2-206ENST00000454704 BACH2Q9BYV9 841 aa13.78□□□□□ -0.2
GTF3C2-206ENST00000454704 ANKRD26Q9UPS8 1709 aa13.78□□□□□ -0.2
GTF3C2-206ENST00000454704 RGPD8O14715 1765 aaPredicted RBP13.77□□□□□ -0.2
GTF3C2-206ENST00000454704 DDRGK1Q96HY6 314 aa13.77□□□□□ -0.21
GTF3C2-206ENST00000454704 GJD4Q96KN9 370 aaPredicted RBP13.77□□□□□ -0.21
GTF3C2-206ENST00000454704 GLI3P10071 1580 aa13.77□□□□□ -0.21
GTF3C2-206ENST00000454704 SPATA31A3Q5VYP0 1347 aa13.77□□□□□ -0.21
GTF3C2-206ENST00000454704 SLIT2O94813 1529 aa13.76□□□□□ -0.21
GTF3C2-206ENST00000454704 PDE4AP27815 886 aa13.76□□□□□ -0.21
GTF3C2-206ENST00000454704 CFAP70Q5T0N1 1121 aa13.76□□□□□ -0.21
GTF3C2-206ENST00000454704 C14orf93Q9H972 538 aaKnown RBP13.76□□□□□ -0.21
GTF3C2-206ENST00000454704 UNC5CLQ8IV45 518 aa13.75□□□□□ -0.21
GTF3C2-206ENST00000454704 CRBNQ96SW2 442 aa13.75□□□□□ -0.21
GTF3C2-206ENST00000454704 SALL2Q9Y467 1007 aaPredicted RBP13.75□□□□□ -0.21
GTF3C2-206ENST00000454704 KDM2BQ8NHM5 1336 aa13.75□□□□□ -0.21
GTF3C2-206ENST00000454704 TNS3Q68CZ2 1445 aa13.75□□□□□ -0.21
GTF3C2-206ENST00000454704 ZRANB1Q9UGI0 708 aa13.74□□□□□ -0.21
GTF3C2-206ENST00000454704 ABCA3Q99758 1704 aa13.74□□□□□ -0.21
GTF3C2-206ENST00000454704 PLCH1Q4KWH8 1693 aa13.74□□□□□ -0.21
GTF3C2-206ENST00000454704 PLEKHG5O94827 1062 aa13.73□□□□□ -0.21
GTF3C2-206ENST00000454704 KRT28Q7Z3Y7 464 aa13.73□□□□□ -0.21
GTF3C2-206ENST00000454704 BRWD3Q6RI45 1802 aa13.73□□□□□ -0.21
GTF3C2-206ENST00000454704 USP35Q9P2H5 1018 aa13.73□□□□□ -0.21
GTF3C2-206ENST00000454704 PHF8Q9UPP1 1060 aa13.73□□□□□ -0.21
GTF3C2-206ENST00000454704 HAP1P54257 671 aaPredicted RBP13.72□□□□□ -0.21
GTF3C2-206ENST00000454704 SAFB2Q14151 953 aaKnown RBP eCLIP13.72□□□□□ -0.21
GTF3C2-206ENST00000454704 PDE3AQ14432 1141 aa13.72□□□□□ -0.21
GTF3C2-206ENST00000454704 CCDC125Q86Z20 511 aa13.72□□□□□ -0.21
GTF3C2-206ENST00000454704 CABLES1Q8TDN4 633 aa13.72□□□□□ -0.21
GTF3C2-206ENST00000454704 CGNL1Q0VF96 1302 aa13.72□□□□□ -0.21
GTF3C2-206ENST00000454704 NSD3Q9BZ95 1437 aa13.71□□□□□ -0.21
GTF3C2-206ENST00000454704 SIRT1Q96EB6 747 aa13.71□□□□□ -0.22
GTF3C2-206ENST00000454704 PRAM1Q96QH2 718 aa13.71□□□□□ -0.22
GTF3C2-206ENST00000454704 ADGRB2O60241 1585 aa13.7□□□□□ -0.22
GTF3C2-206ENST00000454704 NWD2Q9ULI1 1742 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms