RNA–Protein interactions for RNA: ENST00000454402.6

RFC5-204, Transcript of replication factor C subunit 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC5, Length 1,655 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-204ENST00000454402 ARHGEF10O15013 1369 aa21.82■■□□□ 1.08
RFC5-204ENST00000454402 ABTB2Q8N961 1025 aa21.82■■□□□ 1.08
RFC5-204ENST00000454402 KTN1Q86UP2 1357 aaKnown RBP21.81■■□□□ 1.08
RFC5-204ENST00000454402 USP6P35125 1406 aa21.81■■□□□ 1.08
RFC5-204ENST00000454402 COL22A1Q8NFW1 1626 aaPredicted RBP21.81■■□□□ 1.08
RFC5-204ENST00000454402 HDGFL2Q7Z4V5 671 aaPredicted RBP21.8■■□□□ 1.08
RFC5-204ENST00000454402 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.8■■□□□ 1.08
RFC5-204ENST00000454402 CDCA8Q53HL2 280 aa21.79■■□□□ 1.08
RFC5-204ENST00000454402 NGLY1Q96IV0 654 aa21.79■■□□□ 1.08
RFC5-204ENST00000454402 ALS2Q96Q42 1657 aa21.78■■□□□ 1.08
RFC5-204ENST00000454402 ZNF692Q9BU19 519 aaPredicted RBP21.78■■□□□ 1.08
RFC5-204ENST00000454402 TERF2IPQ9NYB0 399 aa21.77■■□□□ 1.08
RFC5-204ENST00000454402 PUS7Q96PZ0 661 aaKnown RBP21.76■■□□□ 1.07
RFC5-204ENST00000454402 A0A1W2PP64 1363 aa21.76■■□□□ 1.07
RFC5-204ENST00000454402 AFF2P51816 1311 aa21.75■■□□□ 1.07
RFC5-204ENST00000454402 TTC21BQ7Z4L5 1316 aa21.75■■□□□ 1.07
RFC5-204ENST00000454402 CPSF1Q10570 1443 aaKnown RBP21.75■■□□□ 1.07
RFC5-204ENST00000454402 CD163L1Q9NR16 1453 aa21.75■■□□□ 1.07
RFC5-204ENST00000454402 NLRP6P59044 892 aa21.75■■□□□ 1.07
RFC5-204ENST00000454402 RGS17Q9UGC6 210 aaPredicted RBP21.75■■□□□ 1.07
RFC5-204ENST00000454402 AKAP12Q02952 1782 aa21.75■■□□□ 1.07
RFC5-204ENST00000454402 ZBTB7CA1YPR0 619 aa21.74■■□□□ 1.07
RFC5-204ENST00000454402 SOX12O15370 315 aa21.74■■□□□ 1.07
RFC5-204ENST00000454402 C11orf95C9JLR9 678 aaPredicted RBP21.73■■□□□ 1.07
RFC5-204ENST00000454402 ZRANB1Q9UGI0 708 aa21.72■■□□□ 1.07
RFC5-204ENST00000454402 ZC3H6P61129 1189 aaKnown RBP21.72■■□□□ 1.07
RFC5-204ENST00000454402 ABCA3Q99758 1704 aa21.71■■□□□ 1.07
RFC5-204ENST00000454402 NLRP13Q86W25 1043 aa21.71■■□□□ 1.07
RFC5-204ENST00000454402 NME9Q86XW9 330 aa21.71■■□□□ 1.07
RFC5-204ENST00000454402 NINLQ9Y2I6 1382 aa21.7■■□□□ 1.07
RFC5-204ENST00000454402 SSH2Q76I76 1423 aa21.7■■□□□ 1.06
RFC5-204ENST00000454402 MON2Q7Z3U7 1717 aa21.69■■□□□ 1.06
RFC5-204ENST00000454402 POTEAQ6S8J7 498 aa21.69■■□□□ 1.06
RFC5-204ENST00000454402 PIK3C2AO00443 1686 aa21.69■■□□□ 1.06
RFC5-204ENST00000454402 USP21Q9UK80 565 aa21.69■■□□□ 1.06
RFC5-204ENST00000454402 NRKQ7Z2Y5 1582 aa21.68■■□□□ 1.06
RFC5-204ENST00000454402 BRD4O60885 1362 aaPredicted RBP21.68■■□□□ 1.06
RFC5-204ENST00000454402 ANKRD36BQ8N2N9 1353 aa21.68■■□□□ 1.06
RFC5-204ENST00000454402 TTC21AQ8NDW8 1320 aa21.68■■□□□ 1.06
RFC5-204ENST00000454402 CHRNA2Q15822 529 aa21.67■■□□□ 1.06
RFC5-204ENST00000454402 ZNF772Q68DY9 489 aaPredicted RBP21.67■■□□□ 1.06
RFC5-204ENST00000454402 MYOM1P52179 1685 aa21.67■■□□□ 1.06
RFC5-204ENST00000454402 EDC4Q6P2E9 1401 aaKnown RBP21.66■■□□□ 1.06
RFC5-204ENST00000454402 FAM83GA6ND36 823 aa21.66■■□□□ 1.06
RFC5-204ENST00000454402 ILDR2Q71H61 639 aa21.66■■□□□ 1.06
RFC5-204ENST00000454402 PRDM11Q9NQV5 511 aa21.66■■□□□ 1.06
RFC5-204ENST00000454402 PHRF1Q9P1Y6 1649 aaKnown RBP21.66■■□□□ 1.06
RFC5-204ENST00000454402 MARF1Q9Y4F3 1742 aaKnown RBP21.66■■□□□ 1.06
RFC5-204ENST00000454402 KIAA0232Q92628 1395 aa21.66■■□□□ 1.06
RFC5-204ENST00000454402 GCP02774 474 aa21.65■■□□□ 1.06
RFC5-204ENST00000454402 KIF7Q2M1P5 1343 aa21.64■■□□□ 1.06
RFC5-204ENST00000454402 CRYBG1Q9Y4K1 1723 aa21.64■■□□□ 1.06
RFC5-204ENST00000454402 USP19O94966 1318 aa21.64■■□□□ 1.05
RFC5-204ENST00000454402 QTRT2Q9H974 415 aaKnown RBP21.63■■□□□ 1.05
RFC5-204ENST00000454402 CARD14Q9BXL6 1004 aa21.62■■□□□ 1.05
RFC5-204ENST00000454402 BTG4Q9NY30 223 aa21.62■■□□□ 1.05
RFC5-204ENST00000454402 NSD3Q9BZ95 1437 aa21.62■■□□□ 1.05
RFC5-204ENST00000454402 FNBP4Q8N3X1 1017 aaPredicted RBP21.61■■□□□ 1.05
RFC5-204ENST00000454402 GGNBP2Q9H3C7 697 aa21.61■■□□□ 1.05
RFC5-204ENST00000454402 CCDC9Q9Y3X0 531 aaKnown RBP21.61■■□□□ 1.05
RFC5-204ENST00000454402 PANK3Q9H999 370 aa21.6■■□□□ 1.05
RFC5-204ENST00000454402 ZEB1P37275 1124 aaPredicted RBP21.6■■□□□ 1.05
RFC5-204ENST00000454402 STRN4Q9NRL3 753 aa21.59■■□□□ 1.05
RFC5-204ENST00000454402 PLCH1Q4KWH8 1693 aa21.58■■□□□ 1.05
RFC5-204ENST00000454402 BCL9LQ86UU0 1499 aa21.58■■□□□ 1.05
RFC5-204ENST00000454402 UNC5CLQ8IV45 518 aa21.58■■□□□ 1.05
RFC5-204ENST00000454402 COG3Q96JB2 828 aa21.58■■□□□ 1.05
RFC5-204ENST00000454402 TRPC5Q9UL62 973 aaPredicted RBP21.57■■□□□ 1.04
RFC5-204ENST00000454402 SLIT3O75094 1523 aa21.57■■□□□ 1.04
RFC5-204ENST00000454402 SLIT2O94813 1529 aa21.57■■□□□ 1.04
RFC5-204ENST00000454402 RXRBP28702 533 aa21.56■■□□□ 1.04
RFC5-204ENST00000454402 KCNH5Q8NCM2 988 aa21.56■■□□□ 1.04
RFC5-204ENST00000454402 WASHC2AQ641Q2 1341 aa21.56■■□□□ 1.04
RFC5-204ENST00000454402 CCDC7Q96M83 1385 aa21.56■■□□□ 1.04
RFC5-204ENST00000454402 COL14A1Q05707 1796 aaKnown RBP21.55■■□□□ 1.04
RFC5-204ENST00000454402 FYB1O15117 783 aa21.55■■□□□ 1.04
RFC5-204ENST00000454402 FBLN1P23142 703 aa21.55■■□□□ 1.04
RFC5-204ENST00000454402 USP31Q70CQ4 1352 aa21.55■■□□□ 1.04
RFC5-204ENST00000454402 CNGB1Q14028 1251 aaPredicted RBP21.54■■□□□ 1.04
RFC5-204ENST00000454402 EVA1CP58658 441 aa21.53■■□□□ 1.04
RFC5-204ENST00000454402 OVOS2A0A0J9YW53 1432 aa21.52■■□□□ 1.04
RFC5-204ENST00000454402 OVOS2Q6IE36 1432 aa21.52■■□□□ 1.04
RFC5-204ENST00000454402 ATRNO75882 1429 aa21.51■■□□□ 1.03
RFC5-204ENST00000454402 CPDO75976 1380 aa21.51■■□□□ 1.03
RFC5-204ENST00000454402 RBM6P78332 1123 aaKnown RBP21.51■■□□□ 1.03
RFC5-204ENST00000454402 CGNL1Q0VF96 1302 aa21.51■■□□□ 1.03
RFC5-204ENST00000454402 USP35Q9P2H5 1018 aa21.5■■□□□ 1.03
RFC5-204ENST00000454402 KIF20BQ96Q89 1820 aa21.5■■□□□ 1.03
RFC5-204ENST00000454402 NFAT5O94916 1531 aa21.5■■□□□ 1.03
RFC5-204ENST00000454402 ARHGEF25Q86VW2 580 aa21.5■■□□□ 1.03
RFC5-204ENST00000454402 GJD4Q96KN9 370 aaPredicted RBP21.5■■□□□ 1.03
RFC5-204ENST00000454402 TNNT2P45379 298 aaPredicted RBP21.49■■□□□ 1.03
RFC5-204ENST00000454402 NWD2Q9ULI1 1742 aa21.49■■□□□ 1.03
RFC5-204ENST00000454402 A0A0G2JS52 829 aa21.48■■□□□ 1.03
RFC5-204ENST00000454402 MYT1Q01538 1121 aa21.48■■□□□ 1.03
RFC5-204ENST00000454402 VPS72Q15906 364 aa21.48■■□□□ 1.03
RFC5-204ENST00000454402 AXIN2Q9Y2T1 843 aa21.48■■□□□ 1.03
RFC5-204ENST00000454402 KNSTRNQ9Y448 316 aa21.48■■□□□ 1.03
RFC5-204ENST00000454402 CAMTA1Q9Y6Y1 1673 aa21.48■■□□□ 1.03
RFC5-204ENST00000454402 NRAPQ86VF7 1730 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms