RNA–Protein interactions for RNA: ENST00000454289.7

TSFM-204, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSFM, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-204ENST00000454289 PLEKHG3A1L390 1219 aa17.27■□□□□ 0.36
TSFM-204ENST00000454289 ZRANB1Q9UGI0 708 aa17.27■□□□□ 0.36
TSFM-204ENST00000454289 RCAN3Q9UKA8 241 aa17.27■□□□□ 0.36
TSFM-204ENST00000454289 NRKQ7Z2Y5 1582 aa17.27■□□□□ 0.36
TSFM-204ENST00000454289 IQSEC2Q5JU85 1478 aa17.26■□□□□ 0.35
TSFM-204ENST00000454289 ZNF692Q9BU19 519 aaPredicted RBP17.26■□□□□ 0.35
TSFM-204ENST00000454289 RUNDC1Q96C34 613 aa17.26■□□□□ 0.35
TSFM-204ENST00000454289 ACEP12821 1306 aa17.26■□□□□ 0.35
TSFM-204ENST00000454289 PNPLA6Q8IY17 1366 aa17.25■□□□□ 0.35
TSFM-204ENST00000454289 GOLGA2Q08379 1002 aa17.25■□□□□ 0.35
TSFM-204ENST00000454289 MAP2P11137 1827 aaKnown RBP17.25■□□□□ 0.35
TSFM-204ENST00000454289 RGPD8O14715 1765 aaPredicted RBP17.25■□□□□ 0.35
TSFM-204ENST00000454289 FBLN1P23142 703 aa17.25■□□□□ 0.35
TSFM-204ENST00000454289 U2AF1L5P0DN76 240 aaPredicted RBP17.24■□□□□ 0.35
TSFM-204ENST00000454289 U2AF1Q01081 240 aaKnown RBP eCLIP17.24■□□□□ 0.35
TSFM-204ENST00000454289 DUSP27Q5VZP5 1158 aa17.24■□□□□ 0.35
TSFM-204ENST00000454289 NGEFQ8N5V2 710 aa17.24■□□□□ 0.35
TSFM-204ENST00000454289 POLKQ9UBT6 870 aa17.23■□□□□ 0.35
TSFM-204ENST00000454289 NPHP4O75161 1426 aaPredicted RBP17.23■□□□□ 0.35
TSFM-204ENST00000454289 SLFN5Q08AF3 891 aa17.23■□□□□ 0.35
TSFM-204ENST00000454289 USP6P35125 1406 aa17.22■□□□□ 0.35
TSFM-204ENST00000454289 RRP1P56182 461 aaKnown RBP17.22■□□□□ 0.35
TSFM-204ENST00000454289 PPP4R2Q9NY27 417 aa17.22■□□□□ 0.35
TSFM-204ENST00000454289 TTC21BQ7Z4L5 1316 aa17.22■□□□□ 0.35
TSFM-204ENST00000454289 FMN2Q9NZ56 1722 aa17.22■□□□□ 0.35
TSFM-204ENST00000454289 TCP11L2Q8N4U5 519 aa17.22■□□□□ 0.35
TSFM-204ENST00000454289 TRMT2AQ8IZ69 625 aaKnown RBP17.21■□□□□ 0.35
TSFM-204ENST00000454289 COG3Q96JB2 828 aa17.21■□□□□ 0.35
TSFM-204ENST00000454289 SPINK5Q9NQ38 1064 aaPredicted RBP17.21■□□□□ 0.35
TSFM-204ENST00000454289 DMRT2Q9Y5R5 561 aa17.21■□□□□ 0.35
TSFM-204ENST00000454289 NALCNQ8IZF0 1738 aa17.21■□□□□ 0.34
TSFM-204ENST00000454289 U2SURPO15042 1029 aaKnown RBP17.21■□□□□ 0.34
TSFM-204ENST00000454289 AATKQ6ZMQ8 1374 aa17.2■□□□□ 0.34
TSFM-204ENST00000454289 DIAPH1O60610 1272 aaKnown RBP17.2■□□□□ 0.34
TSFM-204ENST00000454289 RRP7AQ9Y3A4 280 aaKnown RBP17.2■□□□□ 0.34
TSFM-204ENST00000454289 SSH2Q76I76 1423 aa17.2■□□□□ 0.34
TSFM-204ENST00000454289 WWC1Q8IX03 1113 aa17.19■□□□□ 0.34
TSFM-204ENST00000454289 PMFBP1Q8TBY8 1022 aa17.19■□□□□ 0.34
TSFM-204ENST00000454289 ANKARQ7Z5J8 1434 aa17.19■□□□□ 0.34
TSFM-204ENST00000454289 EMILIN1Q9Y6C2 1016 aa17.19■□□□□ 0.34
TSFM-204ENST00000454289 PPM1GO15355 546 aaPredicted RBP17.18■□□□□ 0.34
TSFM-204ENST00000454289 PHF23Q9BUL5 403 aaPredicted RBP17.18■□□□□ 0.34
TSFM-204ENST00000454289 NEUROD2Q15784 382 aa17.18■□□□□ 0.34
TSFM-204ENST00000454289 PLEKHF1Q96S99 279 aa17.18■□□□□ 0.34
TSFM-204ENST00000454289 CDK12Q9NYV4 1490 aaPredicted RBP17.17■□□□□ 0.34
TSFM-204ENST00000454289 OVOS2A0A0J9YW53 1432 aa17.17■□□□□ 0.34
TSFM-204ENST00000454289 OVOS2Q6IE36 1432 aa17.17■□□□□ 0.34
TSFM-204ENST00000454289 E9PSI1 815 aa17.17■□□□□ 0.34
TSFM-204ENST00000454289 RBM33Q96EV2 1170 aaKnown RBP17.15■□□□□ 0.34
TSFM-204ENST00000454289 RRS1Q15050 365 aaKnown RBP17.15■□□□□ 0.34
TSFM-204ENST00000454289 CCDC27Q2M243 656 aa17.15■□□□□ 0.34
TSFM-204ENST00000454289 NGDNQ8NEJ9 315 aaKnown RBP17.15■□□□□ 0.34
TSFM-204ENST00000454289 NCBP3Q53F19 620 aaKnown RBP17.14■□□□□ 0.33
TSFM-204ENST00000454289 NWD1Q149M9 1564 aa17.14■□□□□ 0.33
TSFM-204ENST00000454289 B4GALNT3Q6L9W6 998 aa17.13■□□□□ 0.33
TSFM-204ENST00000454289 TTC21AQ8NDW8 1320 aa17.13■□□□□ 0.33
TSFM-204ENST00000454289 ADGRL3Q9HAR2 1447 aa17.13■□□□□ 0.33
TSFM-204ENST00000454289 LRRC7Q96NW7 1537 aa17.13■□□□□ 0.33
TSFM-204ENST00000454289 PLIN1O60240 522 aa17.12■□□□□ 0.33
TSFM-204ENST00000454289 IL13P35225 146 aa17.12■□□□□ 0.33
TSFM-204ENST00000454289 WDR63Q8IWG1 891 aa17.12■□□□□ 0.33
TSFM-204ENST00000454289 USP31Q70CQ4 1352 aa17.12■□□□□ 0.33
TSFM-204ENST00000454289 MAPK8IP3Q9UPT6 1336 aa17.11■□□□□ 0.33
TSFM-204ENST00000454289 PIK3C2AO00443 1686 aa17.11■□□□□ 0.33
TSFM-204ENST00000454289 TMPOP42166 694 aaKnown RBP17.11■□□□□ 0.33
TSFM-204ENST00000454289 FCHSD2O94868 740 aa17.1■□□□□ 0.33
TSFM-204ENST00000454289 RSPH6AQ9H0K4 717 aa17.1■□□□□ 0.33
TSFM-204ENST00000454289 PEAK1Q9H792 1746 aa17.09■□□□□ 0.33
TSFM-204ENST00000454289 EXOC6Q8TAG9 804 aa17.09■□□□□ 0.33
TSFM-204ENST00000454289 PNNQ9H307 717 aaKnown RBP17.09■□□□□ 0.33
TSFM-204ENST00000454289 PRKAR2BP31323 418 aa17.08■□□□□ 0.32
TSFM-204ENST00000454289 TRIM35Q9UPQ4 493 aa17.08■□□□□ 0.32
TSFM-204ENST00000454289 HMOX1P09601 288 aa17.07■□□□□ 0.32
TSFM-204ENST00000454289 PHF8Q9UPP1 1060 aa17.06■□□□□ 0.32
TSFM-204ENST00000454289 MARF1Q9Y4F3 1742 aaKnown RBP17.06■□□□□ 0.32
TSFM-204ENST00000454289 USP54Q70EL1 1684 aa17.05■□□□□ 0.32
TSFM-204ENST00000454289 SOX12O15370 315 aa17.05■□□□□ 0.32
TSFM-204ENST00000454289 RIPK4P57078 832 aa17.05■□□□□ 0.32
TSFM-204ENST00000454289 C20orf194Q5TEA3 1177 aa17.04■□□□□ 0.32
TSFM-204ENST00000454289 C14orf37Q86TY3 774 aa17.04■□□□□ 0.32
TSFM-204ENST00000454289 EIF4A2Q14240 407 aaKnown RBP17.04■□□□□ 0.32
TSFM-204ENST00000454289 CCDC136Q96JN2 1154 aa17.04■□□□□ 0.32
TSFM-204ENST00000454289 PHACTR3Q96KR7 559 aa17.04■□□□□ 0.32
TSFM-204ENST00000454289 PROSER2Q86WR7 435 aaPredicted RBP17.03■□□□□ 0.32
TSFM-204ENST00000454289 CRBNQ96SW2 442 aa17.03■□□□□ 0.32
TSFM-204ENST00000454289 TSHZ2Q9NRE2 1034 aa17.03■□□□□ 0.32
TSFM-204ENST00000454289 MAP3K19Q56UN5 1328 aa17.02■□□□□ 0.32
TSFM-204ENST00000454289 BCAR3O75815 825 aa17.02■□□□□ 0.32
TSFM-204ENST00000454289 MYH16Q9H6N6 1097 aa17.02■□□□□ 0.32
TSFM-204ENST00000454289 NLRP6P59044 892 aa17.02■□□□□ 0.31
TSFM-204ENST00000454289 HSP90AB2PQ58FF8 381 aa17.02■□□□□ 0.31
TSFM-204ENST00000454289 STRCP1A6NGW2 1772 aa17.02■□□□□ 0.31
TSFM-204ENST00000454289 HSPA2P54652 639 aa17.01■□□□□ 0.31
TSFM-204ENST00000454289 ESCO1Q5FWF5 840 aa17.01■□□□□ 0.31
TSFM-204ENST00000454289 NUTM2GQ5VZR2 741 aa17.01■□□□□ 0.31
TSFM-204ENST00000454289 RGPD1P0DJD0 1748 aa17.01■□□□□ 0.31
TSFM-204ENST00000454289 KDM4FA0A1W2PPD8 638 aa17.01■□□□□ 0.31
TSFM-204ENST00000454289 NFE2L2Q16236 605 aa17.01■□□□□ 0.31
TSFM-204ENST00000454289 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.01■□□□□ 0.31
TSFM-204ENST00000454289 PAK3O75914 559 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms