RNA–Protein interactions for RNA: ENST00000453727.6

LMO3-210, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 2,403 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-210ENST00000453727 DMRT2Q9Y5R5 561 aa11.29□□□□□ -0.6
LMO3-210ENST00000453727 MORC1Q86VD1 984 aa11.29□□□□□ -0.6
LMO3-210ENST00000453727 CDC42BPGQ6DT37 1551 aa11.29□□□□□ -0.6
LMO3-210ENST00000453727 PAK3O75914 559 aaPredicted RBP11.28□□□□□ -0.6
LMO3-210ENST00000453727 ZNF335Q9H4Z2 1342 aaPredicted RBP11.28□□□□□ -0.6
LMO3-210ENST00000453727 NSD2O96028 1365 aa11.28□□□□□ -0.6
LMO3-210ENST00000453727 TMEM94Q12767 1356 aa11.28□□□□□ -0.6
LMO3-210ENST00000453727 CPSF1Q10570 1443 aaKnown RBP11.28□□□□□ -0.6
LMO3-210ENST00000453727 PODXL2Q9NZ53 605 aa11.28□□□□□ -0.6
LMO3-210ENST00000453727 ITSN1Q15811 1721 aa11.28□□□□□ -0.6
LMO3-210ENST00000453727 AKAP12Q02952 1782 aa11.28□□□□□ -0.6
LMO3-210ENST00000453727 ANKRD26Q9UPS8 1709 aa11.27□□□□□ -0.6
LMO3-210ENST00000453727 RGPD8O14715 1765 aaPredicted RBP11.27□□□□□ -0.6
LMO3-210ENST00000453727 KIF20BQ96Q89 1820 aa11.27□□□□□ -0.6
LMO3-210ENST00000453727 MON2Q7Z3U7 1717 aa11.27□□□□□ -0.61
LMO3-210ENST00000453727 FMN2Q9NZ56 1722 aa11.27□□□□□ -0.61
LMO3-210ENST00000453727 TNNT2P45379 298 aaPredicted RBP11.27□□□□□ -0.61
LMO3-210ENST00000453727 PMFBP1Q8TBY8 1022 aa11.27□□□□□ -0.61
LMO3-210ENST00000453727 C19orf44Q9H6X5 657 aa11.27□□□□□ -0.61
LMO3-210ENST00000453727 PLEKHG3A1L390 1219 aa11.26□□□□□ -0.61
LMO3-210ENST00000453727 FYB1O15117 783 aa11.26□□□□□ -0.61
LMO3-210ENST00000453727 ACEP12821 1306 aa11.26□□□□□ -0.61
LMO3-210ENST00000453727 ANKARQ7Z5J8 1434 aa11.26□□□□□ -0.61
LMO3-210ENST00000453727 GGNBP2Q9H3C7 697 aa11.26□□□□□ -0.61
LMO3-210ENST00000453727 ZNF692Q9BU19 519 aaPredicted RBP11.26□□□□□ -0.61
LMO3-210ENST00000453727 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.25□□□□□ -0.61
LMO3-210ENST00000453727 ZBTB47Q9UFB7 747 aaPredicted RBP11.25□□□□□ -0.61
LMO3-210ENST00000453727 EDC4Q6P2E9 1401 aaKnown RBP11.25□□□□□ -0.61
LMO3-210ENST00000453727 PLEKHG5O94827 1062 aa11.25□□□□□ -0.61
LMO3-210ENST00000453727 NCOA3Q9Y6Q9 1424 aa11.24□□□□□ -0.61
LMO3-210ENST00000453727 ANP32AP39687 249 aaKnown RBP11.24□□□□□ -0.61
LMO3-210ENST00000453727 NGDNQ8NEJ9 315 aaKnown RBP11.24□□□□□ -0.61
LMO3-210ENST00000453727 SENP3-EIF4A1A0A087X0R7 540 aa11.23□□□□□ -0.61
LMO3-210ENST00000453727 ATF3P18847 181 aa11.23□□□□□ -0.61
LMO3-210ENST00000453727 ESCO1Q5FWF5 840 aa11.23□□□□□ -0.61
LMO3-210ENST00000453727 PPP4R2Q9NY27 417 aa11.23□□□□□ -0.61
LMO3-210ENST00000453727 LRRC7Q96NW7 1537 aa11.23□□□□□ -0.61
LMO3-210ENST00000453727 ZBED9Q6R2W3 1325 aa11.23□□□□□ -0.61
LMO3-210ENST00000453727 NRKQ7Z2Y5 1582 aa11.22□□□□□ -0.61
LMO3-210ENST00000453727 POLR3AO14802 1390 aaPredicted RBP11.22□□□□□ -0.61
LMO3-210ENST00000453727 IRX6P78412 446 aaPredicted RBP11.22□□□□□ -0.61
LMO3-210ENST00000453727 PHF8Q9UPP1 1060 aa11.22□□□□□ -0.61
LMO3-210ENST00000453727 MSH6P52701 1360 aa11.22□□□□□ -0.61
LMO3-210ENST00000453727 USP6P35125 1406 aa11.22□□□□□ -0.61
LMO3-210ENST00000453727 IPO9Q96P70 1041 aaKnown RBP11.21□□□□□ -0.61
LMO3-210ENST00000453727 RSPH6AQ9H0K4 717 aa11.21□□□□□ -0.61
LMO3-210ENST00000453727 ADAMTS8Q9UP79 889 aa11.21□□□□□ -0.61
LMO3-210ENST00000453727 XIRP1Q702N8 1843 aaKnown RBP11.21□□□□□ -0.61
LMO3-210ENST00000453727 DCCP43146 1447 aa11.21□□□□□ -0.61
LMO3-210ENST00000453727 BLMP54132 1417 aaPredicted RBP11.21□□□□□ -0.61
LMO3-210ENST00000453727 MTHFSP49914 203 aa11.21□□□□□ -0.61
LMO3-210ENST00000453727 AEBP2Q6ZN18 517 aaPredicted RBP11.21□□□□□ -0.61
LMO3-210ENST00000453727 CADPS2Q86UW7 1296 aa11.21□□□□□ -0.61
LMO3-210ENST00000453727 NME9Q86XW9 330 aa11.21□□□□□ -0.61
LMO3-210ENST00000453727 ORAI2Q96SN7 254 aa11.21□□□□□ -0.61
LMO3-210ENST00000453727 WDR43Q15061 677 aaKnown RBP eCLIP11.2□□□□□ -0.62
LMO3-210ENST00000453727 INSRP06213 1382 aa11.2□□□□□ -0.62
LMO3-210ENST00000453727 SHPRHQ149N8 1683 aa11.2□□□□□ -0.62
LMO3-210ENST00000453727 ZRANB1Q9UGI0 708 aa11.2□□□□□ -0.62
LMO3-210ENST00000453727 TTC21BQ7Z4L5 1316 aa11.2□□□□□ -0.62
LMO3-210ENST00000453727 C1orf167Q5SNV9 1468 aa11.19□□□□□ -0.62
LMO3-210ENST00000453727 MST1RQ04912 1400 aa11.19□□□□□ -0.62
LMO3-210ENST00000453727 USP35Q9P2H5 1018 aa11.18□□□□□ -0.62
LMO3-210ENST00000453727 SSH2Q76I76 1423 aa11.18□□□□□ -0.62
LMO3-210ENST00000453727 FOXO3O43524 673 aa11.18□□□□□ -0.62
LMO3-210ENST00000453727 MAP2P11137 1827 aaKnown RBP11.18□□□□□ -0.62
LMO3-210ENST00000453727 FBLN1P23142 703 aa11.17□□□□□ -0.62
LMO3-210ENST00000453727 PSME1Q06323 249 aa11.17□□□□□ -0.62
LMO3-210ENST00000453727 COG3Q96JB2 828 aa11.17□□□□□ -0.62
LMO3-210ENST00000453727 CFAP53Q96M91 514 aa11.17□□□□□ -0.62
LMO3-210ENST00000453727 TTC21AQ8NDW8 1320 aa11.17□□□□□ -0.62
LMO3-210ENST00000453727 COL3A1P02461 1466 aaPredicted RBP11.15□□□□□ -0.62
LMO3-210ENST00000453727 ZMYND15Q9H091 742 aa11.15□□□□□ -0.62
LMO3-210ENST00000453727 XPCQ01831 940 aaPredicted RBP11.15□□□□□ -0.63
LMO3-210ENST00000453727 CCDC146Q8IYE0 955 aa11.15□□□□□ -0.63
LMO3-210ENST00000453727 POLKQ9UBT6 870 aa11.15□□□□□ -0.63
LMO3-210ENST00000453727 OVOS2A0A0J9YW53 1432 aa11.14□□□□□ -0.63
LMO3-210ENST00000453727 OVOS2Q6IE36 1432 aa11.14□□□□□ -0.63
LMO3-210ENST00000453727 VSIG10Q8N0Z9 540 aa11.14□□□□□ -0.63
LMO3-210ENST00000453727 ABTB2Q8N961 1025 aa11.14□□□□□ -0.63
LMO3-210ENST00000453727 SLAIN2Q9P270 581 aa11.14□□□□□ -0.63
LMO3-210ENST00000453727 PIK3C2AO00443 1686 aa11.14□□□□□ -0.63
LMO3-210ENST00000453727 KIF1AQ12756 1690 aa11.14□□□□□ -0.63
LMO3-210ENST00000453727 NEFMP07197 916 aa11.14□□□□□ -0.63
LMO3-210ENST00000453727 AATKQ6ZMQ8 1374 aa11.14□□□□□ -0.63
LMO3-210ENST00000453727 LTBP4Q8N2S1 1624 aa11.13□□□□□ -0.63
LMO3-210ENST00000453727 NLRP6P59044 892 aa11.13□□□□□ -0.63
LMO3-210ENST00000453727 NUTM2GQ5VZR2 741 aa11.13□□□□□ -0.63
LMO3-210ENST00000453727 EMILIN1Q9Y6C2 1016 aa11.13□□□□□ -0.63
LMO3-210ENST00000453727 PNPLA6Q8IY17 1366 aa11.13□□□□□ -0.63
LMO3-210ENST00000453727 BRPF3Q9ULD4 1205 aa11.13□□□□□ -0.63
LMO3-210ENST00000453727 SMG6Q86US8 1419 aaKnown RBP11.12□□□□□ -0.63
LMO3-210ENST00000453727 PPM1GO15355 546 aaPredicted RBP11.12□□□□□ -0.63
LMO3-210ENST00000453727 KRT28Q7Z3Y7 464 aa11.12□□□□□ -0.63
LMO3-210ENST00000453727 DDX17Q92841 729 aaKnown RBP11.12□□□□□ -0.63
LMO3-210ENST00000453727 SOX12O15370 315 aa11.11□□□□□ -0.63
LMO3-210ENST00000453727 RRS1Q15050 365 aaKnown RBP11.11□□□□□ -0.63
LMO3-210ENST00000453727 B4GALNT3Q6L9W6 998 aa11.11□□□□□ -0.63
LMO3-210ENST00000453727 BRINP3Q76B58 766 aa11.11□□□□□ -0.63
LMO3-210ENST00000453727 USP31Q70CQ4 1352 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms