RNA–Protein interactions for RNA: ENST00000453394.5

RAD50-205, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 5

Gene RAD50, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-205ENST00000453394 UBAP1LF5GYI3 381 aa11.32□□□□□ -0.6
RAD50-205ENST00000453394 TMC1Q8TDI8 760 aa11.32□□□□□ -0.6
RAD50-205ENST00000453394 PXDNQ92626 1479 aa11.31□□□□□ -0.6
RAD50-205ENST00000453394 NUTM2FA1L443 756 aa11.31□□□□□ -0.6
RAD50-205ENST00000453394 NGDNQ8NEJ9 315 aaKnown RBP11.31□□□□□ -0.6
RAD50-205ENST00000453394 ACEP12821 1306 aa11.31□□□□□ -0.6
RAD50-205ENST00000453394 SBNO1A3KN83 1393 aa11.31□□□□□ -0.6
RAD50-205ENST00000453394 SSH2Q76I76 1423 aa11.31□□□□□ -0.6
RAD50-205ENST00000453394 ORAI2Q96SN7 254 aa11.31□□□□□ -0.6
RAD50-205ENST00000453394 SLC12A5Q9H2X9 1139 aa11.31□□□□□ -0.6
RAD50-205ENST00000453394 NSD2O96028 1365 aa11.3□□□□□ -0.6
RAD50-205ENST00000453394 KTN1Q86UP2 1357 aaKnown RBP11.3□□□□□ -0.6
RAD50-205ENST00000453394 PSME1Q06323 249 aa11.3□□□□□ -0.6
RAD50-205ENST00000453394 TRPM3Q9HCF6 1732 aaPredicted RBP11.3□□□□□ -0.6
RAD50-205ENST00000453394 TTC21AQ8NDW8 1320 aa11.3□□□□□ -0.6
RAD50-205ENST00000453394 USP54Q70EL1 1684 aa11.3□□□□□ -0.6
RAD50-205ENST00000453394 POLR3GLQ9BT43 218 aa11.29□□□□□ -0.6
RAD50-205ENST00000453394 SOS2Q07890 1332 aaPredicted RBP11.29□□□□□ -0.6
RAD50-205ENST00000453394 NPC1L1Q9UHC9 1359 aa11.29□□□□□ -0.6
RAD50-205ENST00000453394 PMFBP1Q8TBY8 1022 aa11.28□□□□□ -0.6
RAD50-205ENST00000453394 NSD3Q9BZ95 1437 aa11.28□□□□□ -0.6
RAD50-205ENST00000453394 TNS3Q68CZ2 1445 aa11.28□□□□□ -0.6
RAD50-205ENST00000453394 ARHGEF10O15013 1369 aa11.28□□□□□ -0.6
RAD50-205ENST00000453394 FOXO3O43524 673 aa11.28□□□□□ -0.6
RAD50-205ENST00000453394 PANK3Q9H999 370 aa11.28□□□□□ -0.6
RAD50-205ENST00000453394 ZNF219Q9P2Y4 722 aaPredicted RBP11.28□□□□□ -0.6
RAD50-205ENST00000453394 ALS2Q96Q42 1657 aa11.27□□□□□ -0.6
RAD50-205ENST00000453394 COL16A1Q07092 1604 aaPredicted RBP11.27□□□□□ -0.61
RAD50-205ENST00000453394 MED1Q15648 1581 aaPredicted RBP11.27□□□□□ -0.61
RAD50-205ENST00000453394 CGNL1Q0VF96 1302 aa11.27□□□□□ -0.61
RAD50-205ENST00000453394 PHLPP1O60346 1717 aa11.27□□□□□ -0.61
RAD50-205ENST00000453394 KIF20BQ96Q89 1820 aa11.26□□□□□ -0.61
RAD50-205ENST00000453394 KNSTRNQ9Y448 316 aa11.26□□□□□ -0.61
RAD50-205ENST00000453394 USP31Q70CQ4 1352 aa11.25□□□□□ -0.61
RAD50-205ENST00000453394 TTC21BQ7Z4L5 1316 aa11.25□□□□□ -0.61
RAD50-205ENST00000453394 PER1O15534 1290 aaPredicted RBP11.25□□□□□ -0.61
RAD50-205ENST00000453394 KRT28Q7Z3Y7 464 aa11.25□□□□□ -0.61
RAD50-205ENST00000453394 ANKRD26Q9UPS8 1709 aa11.25□□□□□ -0.61
RAD50-205ENST00000453394 PIK3C2AO00443 1686 aa11.25□□□□□ -0.61
RAD50-205ENST00000453394 COL22A1Q8NFW1 1626 aaPredicted RBP11.25□□□□□ -0.61
RAD50-205ENST00000453394 SPATA31A3Q5VYP0 1347 aa11.24□□□□□ -0.61
RAD50-205ENST00000453394 PIP4K2BP78356 416 aa11.24□□□□□ -0.61
RAD50-205ENST00000453394 FBXO41Q8TF61 875 aa11.24□□□□□ -0.61
RAD50-205ENST00000453394 LRRC59Q96AG4 307 aaKnown RBP11.24□□□□□ -0.61
RAD50-205ENST00000453394 CARD14Q9BXL6 1004 aa11.24□□□□□ -0.61
RAD50-205ENST00000453394 OVOS2A0A0J9YW53 1432 aa11.24□□□□□ -0.61
RAD50-205ENST00000453394 OVOS2Q6IE36 1432 aa11.24□□□□□ -0.61
RAD50-205ENST00000453394 SHPRHQ149N8 1683 aa11.23□□□□□ -0.61
RAD50-205ENST00000453394 DDX10Q13206 875 aaKnown RBP11.23□□□□□ -0.61
RAD50-205ENST00000453394 AMER1Q5JTC6 1135 aaPredicted RBP11.22□□□□□ -0.61
RAD50-205ENST00000453394 SLIT3O75094 1523 aa11.22□□□□□ -0.61
RAD50-205ENST00000453394 USP19O94966 1318 aa11.21□□□□□ -0.61
RAD50-205ENST00000453394 JCADQ9P266 1359 aa11.21□□□□□ -0.62
RAD50-205ENST00000453394 CRYBG1Q9Y4K1 1723 aa11.2□□□□□ -0.62
RAD50-205ENST00000453394 PNPLA6Q8IY17 1366 aa11.2□□□□□ -0.62
RAD50-205ENST00000453394 NLRP13Q86W25 1043 aa11.2□□□□□ -0.62
RAD50-205ENST00000453394 ABTB2Q8N961 1025 aa11.2□□□□□ -0.62
RAD50-205ENST00000453394 ABCC6O95255 1503 aa11.2□□□□□ -0.62
RAD50-205ENST00000453394 FYB1O15117 783 aa11.2□□□□□ -0.62
RAD50-205ENST00000453394 PAK3O75914 559 aaPredicted RBP11.2□□□□□ -0.62
RAD50-205ENST00000453394 COG3Q96JB2 828 aa11.2□□□□□ -0.62
RAD50-205ENST00000453394 MARF1Q9Y4F3 1742 aaKnown RBP11.2□□□□□ -0.62
RAD50-205ENST00000453394 PHRF1Q9P1Y6 1649 aaKnown RBP11.19□□□□□ -0.62
RAD50-205ENST00000453394 ABCB7O75027 752 aa11.19□□□□□ -0.62
RAD50-205ENST00000453394 XPCQ01831 940 aaPredicted RBP11.19□□□□□ -0.62
RAD50-205ENST00000453394 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.19□□□□□ -0.622e-6■■□□□ 12.4
RAD50-205ENST00000453394 ABCA3Q99758 1704 aa11.19□□□□□ -0.62
RAD50-205ENST00000453394 AATKQ6ZMQ8 1374 aa11.18□□□□□ -0.62
RAD50-205ENST00000453394 KCNH5Q8NCM2 988 aa11.18□□□□□ -0.62
RAD50-205ENST00000453394 DDX17Q92841 729 aaKnown RBP11.18□□□□□ -0.62
RAD50-205ENST00000453394 SPATA31A6Q5VVP1 1343 aa11.18□□□□□ -0.62
RAD50-205ENST00000453394 KIF24Q5T7B8 1368 aa11.18□□□□□ -0.62
RAD50-205ENST00000453394 PARD3Q8TEW0 1356 aa11.18□□□□□ -0.62
RAD50-205ENST00000453394 SAMD1Q6SPF0 538 aaPredicted RBP11.18□□□□□ -0.62
RAD50-205ENST00000453394 NME9Q86XW9 330 aa11.18□□□□□ -0.62
RAD50-205ENST00000453394 NLRP6P59044 892 aa11.17□□□□□ -0.62
RAD50-205ENST00000453394 RALBP1Q15311 655 aa11.17□□□□□ -0.62
RAD50-205ENST00000453394 NFAT5O94916 1531 aa11.17□□□□□ -0.62
RAD50-205ENST00000453394 CPDO75976 1380 aa11.16□□□□□ -0.62
RAD50-205ENST00000453394 SMG6Q86US8 1419 aaKnown RBP11.16□□□□□ -0.62
RAD50-205ENST00000453394 HSPA1LP34931 641 aa11.15□□□□□ -0.62
RAD50-205ENST00000453394 GGNBP2Q9H3C7 697 aa11.15□□□□□ -0.62
RAD50-205ENST00000453394 RTL1A6NKG5 1358 aa11.15□□□□□ -0.62
RAD50-205ENST00000453394 MORC1Q86VD1 984 aa11.15□□□□□ -0.63
RAD50-205ENST00000453394 LMOD2Q6P5Q4 547 aa11.14□□□□□ -0.63
RAD50-205ENST00000453394 ANP32CO43423 234 aa11.13□□□□□ -0.63
RAD50-205ENST00000453394 GCP02774 474 aa11.13□□□□□ -0.63
RAD50-205ENST00000453394 CC2D1BQ5T0F9 858 aaKnown RBP11.13□□□□□ -0.63
RAD50-205ENST00000453394 PRKRIP1Q9H875 184 aaPredicted RBP11.13□□□□□ -0.63
RAD50-205ENST00000453394 CDK12Q9NYV4 1490 aaPredicted RBP11.13□□□□□ -0.63
RAD50-205ENST00000453394 DIEXFQ68CQ4 756 aaKnown RBP11.12□□□□□ -0.63
RAD50-205ENST00000453394 BLMP54132 1417 aaPredicted RBP11.12□□□□□ -0.63
RAD50-205ENST00000453394 MYBBP1AQ9BQG0 1328 aaKnown RBP11.12□□□□□ -0.63
RAD50-205ENST00000453394 COL14A1Q05707 1796 aaKnown RBP11.11□□□□□ -0.63
RAD50-205ENST00000453394 LTN1O94822 1766 aa11.1□□□□□ -0.63
RAD50-205ENST00000453394 FLT4P35916 1363 aa11.1□□□□□ -0.63
RAD50-205ENST00000453394 HAP1P54257 671 aaPredicted RBP11.1□□□□□ -0.63
RAD50-205ENST00000453394 INSRP06213 1382 aa11.1□□□□□ -0.63
RAD50-205ENST00000453394 NUTM2GQ5VZR2 741 aa11.1□□□□□ -0.63
RAD50-205ENST00000453394 ARHGEF25Q86VW2 580 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms