RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 SMC5Q8IY18 1101 aa19.82■□□□□ 0.76
TRA2B-205ENST00000453386 RSPH6AQ9H0K4 717 aa19.82■□□□□ 0.76
TRA2B-205ENST00000453386 XRCC6P12956 609 aaKnown RBP eCLIP19.81■□□□□ 0.76
TRA2B-205ENST00000453386 ZC3H13Q5T200 1668 aaKnown RBP19.81■□□□□ 0.76
TRA2B-205ENST00000453386 A0A1W2PP64 1363 aa19.81■□□□□ 0.76
TRA2B-205ENST00000453386 USP32Q8NFA0 1604 aa19.81■□□□□ 0.76
TRA2B-205ENST00000453386 IPO8O15397 1037 aaKnown RBP19.81■□□□□ 0.76
TRA2B-205ENST00000453386 TRAK2O60296 914 aa19.8■□□□□ 0.76
TRA2B-205ENST00000453386 LNPKQ9C0E8 428 aa19.8■□□□□ 0.76
TRA2B-205ENST00000453386 ZBTB40Q9NUA8 1239 aa19.8■□□□□ 0.76
TRA2B-205ENST00000453386 TULP4Q9NRJ4 1543 aa19.8■□□□□ 0.76
TRA2B-205ENST00000453386 RRAGDQ9NQL2 400 aaPredicted RBP19.8■□□□□ 0.76
TRA2B-205ENST00000453386 PPLO60437 1756 aa19.8■□□□□ 0.76
TRA2B-205ENST00000453386 FYB1O15117 783 aa19.78■□□□□ 0.76
TRA2B-205ENST00000453386 MINK1Q8N4C8 1332 aaPredicted RBP19.78■□□□□ 0.76
TRA2B-205ENST00000453386 ABCC11Q96J66 1382 aa19.77■□□□□ 0.76
TRA2B-205ENST00000453386 KIF16BQ96L93 1317 aa19.77■□□□□ 0.76
TRA2B-205ENST00000453386 DIAPH1O60610 1272 aaKnown RBP19.77■□□□□ 0.76
TRA2B-205ENST00000453386 TERF2IPQ9NYB0 399 aa19.77■□□□□ 0.76
TRA2B-205ENST00000453386 ADGRB2O60241 1585 aa19.77■□□□□ 0.76
TRA2B-205ENST00000453386 IL16Q14005 1332 aa19.77■□□□□ 0.76
TRA2B-205ENST00000453386 PANK2Q9BZ23 570 aa19.77■□□□□ 0.76
TRA2B-205ENST00000453386 GLI2P10070 1586 aa19.77■□□□□ 0.76
TRA2B-205ENST00000453386 FSD2A1L4K1 749 aa19.76■□□□□ 0.75
TRA2B-205ENST00000453386 NUCB1Q02818 461 aa19.76■□□□□ 0.75
TRA2B-205ENST00000453386 NPM1P06748 294 aaKnown RBP eCLIP19.75■□□□□ 0.75
TRA2B-205ENST00000453386 IDI1Q13907 227 aa19.74■□□□□ 0.75
TRA2B-205ENST00000453386 CHD1LQ86WJ1 897 aa19.74■□□□□ 0.75
TRA2B-205ENST00000453386 PNNQ9H307 717 aaKnown RBP19.74■□□□□ 0.75
TRA2B-205ENST00000453386 DDX11L8A8MPP1 907 aa19.72■□□□□ 0.75
TRA2B-205ENST00000453386 PRAM1Q96QH2 718 aa19.72■□□□□ 0.75
TRA2B-205ENST00000453386 HSP90AB1P08238 724 aaKnown RBP19.72■□□□□ 0.75
TRA2B-205ENST00000453386 ANKRD45Q5TZF3 282 aa19.72■□□□□ 0.75
TRA2B-205ENST00000453386 RBM25P49756 843 aaKnown RBP19.71■□□□□ 0.75
TRA2B-205ENST00000453386 ALDH1L2Q3SY69 923 aa19.71■□□□□ 0.75
TRA2B-205ENST00000453386 HDGFL2Q7Z4V5 671 aaPredicted RBP19.71■□□□□ 0.75
TRA2B-205ENST00000453386 ZNF692Q9BU19 519 aaPredicted RBP19.71■□□□□ 0.75
TRA2B-205ENST00000453386 C1orf115Q9H7X2 142 aa19.7■□□□□ 0.74
TRA2B-205ENST00000453386 ABCC3O15438 1527 aa19.7■□□□□ 0.74
TRA2B-205ENST00000453386 POGZQ7Z3K3 1410 aa19.7■□□□□ 0.74
TRA2B-205ENST00000453386 HSP90AA1P07900 732 aaKnown RBP19.7■□□□□ 0.74
TRA2B-205ENST00000453386 RAPGEF3O95398 923 aa19.69■□□□□ 0.74
TRA2B-205ENST00000453386 FBLN1P23142 703 aa19.69■□□□□ 0.74
TRA2B-205ENST00000453386 PRKAR2BP31323 418 aa19.69■□□□□ 0.74
TRA2B-205ENST00000453386 FRMPD1Q5SYB0 1578 aa19.69■□□□□ 0.74
TRA2B-205ENST00000453386 ATAD2Q6PL18 1390 aa19.69■□□□□ 0.74
TRA2B-205ENST00000453386 ARHGEF28Q8N1W1 1705 aaKnown RBP19.69■□□□□ 0.74
TRA2B-205ENST00000453386 MRE11P49959 708 aa19.69■□□□□ 0.74
TRA2B-205ENST00000453386 COL3A1P02461 1466 aaPredicted RBP19.69■□□□□ 0.74
TRA2B-205ENST00000453386 FCHSD2O94868 740 aa19.68■□□□□ 0.74
TRA2B-205ENST00000453386 SNX21Q969T3 373 aa19.68■□□□□ 0.74
TRA2B-205ENST00000453386 FOXD4L1Q9NU39 408 aa19.68■□□□□ 0.74
TRA2B-205ENST00000453386 ELL2O00472 640 aaPredicted RBP19.68■□□□□ 0.74
TRA2B-205ENST00000453386 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.68■□□□□ 0.744e-7■■□□□ 12.6
TRA2B-205ENST00000453386 THUMPD2Q9BTF0 503 aaKnown RBP19.68■□□□□ 0.74
TRA2B-205ENST00000453386 CABP1Q9NZU7 370 aa19.68■□□□□ 0.74
TRA2B-205ENST00000453386 TNPO1Q92973 898 aaKnown RBP19.67■□□□□ 0.74
TRA2B-205ENST00000453386 MLH3Q9UHC1 1453 aa19.67■□□□□ 0.74
TRA2B-205ENST00000453386 BMP2KLQ5H9B9 411 aa19.67■□□□□ 0.74
TRA2B-205ENST00000453386 CAMSAP1Q5T5Y3 1602 aa19.66■□□□□ 0.74
TRA2B-205ENST00000453386 NEXMIFQ5QGS0 1516 aa19.66■□□□□ 0.74
TRA2B-205ENST00000453386 HMOX1P09601 288 aa19.66■□□□□ 0.74
TRA2B-205ENST00000453386 CDK19Q9BWU1 502 aa19.65■□□□□ 0.74
TRA2B-205ENST00000453386 GRPEL1Q9HAV7 217 aa19.65■□□□□ 0.74
TRA2B-205ENST00000453386 ZBTB7BO15156 539 aaPredicted RBP19.65■□□□□ 0.74
TRA2B-205ENST00000453386 HECW2Q9P2P5 1572 aa19.65■□□□□ 0.74
TRA2B-205ENST00000453386 DDIT3P35638 169 aa19.65■□□□□ 0.74
TRA2B-205ENST00000453386 GCC1Q96CN9 775 aa19.64■□□□□ 0.73
TRA2B-205ENST00000453386 GBP4Q96PP9 640 aa19.64■□□□□ 0.73
TRA2B-205ENST00000453386 TSPYL6Q8N831 410 aa19.63■□□□□ 0.73
TRA2B-205ENST00000453386 PHACTR3Q96KR7 559 aa19.63■□□□□ 0.73
TRA2B-205ENST00000453386 SLC52A1Q9NWF4 448 aa19.63■□□□□ 0.73
TRA2B-205ENST00000453386 VAMP4O75379 141 aa19.62■□□□□ 0.73
TRA2B-205ENST00000453386 ZNF428Q96B54 188 aa19.62■□□□□ 0.73
TRA2B-205ENST00000453386 CHMP4BQ9H444 224 aaKnown RBP19.62■□□□□ 0.73
TRA2B-205ENST00000453386 TBC1D9Q6ZT07 1266 aa19.62■□□□□ 0.73
TRA2B-205ENST00000453386 PNPLA6Q8IY17 1366 aa19.62■□□□□ 0.73
TRA2B-205ENST00000453386 PPIP5K1Q6PFW1 1433 aa19.62■□□□□ 0.73
TRA2B-205ENST00000453386 NCOA3Q9Y6Q9 1424 aa19.62■□□□□ 0.73
TRA2B-205ENST00000453386 MRPL50Q8N5N7 158 aaKnown RBP19.62■□□□□ 0.73
TRA2B-205ENST00000453386 NAP1L5Q96NT1 182 aaPredicted RBP19.62■□□□□ 0.73
TRA2B-205ENST00000453386 CIZ1Q9ULV3 898 aaPredicted RBP19.62■□□□□ 0.73
TRA2B-205ENST00000453386 CD2BP2O95400 341 aaKnown RBP19.61■□□□□ 0.73
TRA2B-205ENST00000453386 KIF2CQ99661 725 aa19.61■□□□□ 0.73
TRA2B-205ENST00000453386 POLKQ9UBT6 870 aa19.61■□□□□ 0.73
TRA2B-205ENST00000453386 RBM42Q9BTD8 480 aaKnown RBP19.61■□□□□ 0.73
TRA2B-205ENST00000453386 SIGLEC1Q9BZZ2 1709 aa19.6■□□□□ 0.73
TRA2B-205ENST00000453386 CD163L1Q9NR16 1453 aa19.6■□□□□ 0.73
TRA2B-205ENST00000453386 NFE2L2Q16236 605 aa19.6■□□□□ 0.73
TRA2B-205ENST00000453386 RAB3GAP1Q15042 981 aa19.59■□□□□ 0.73
TRA2B-205ENST00000453386 BRPF1P55201 1214 aaPredicted RBP19.59■□□□□ 0.73
TRA2B-205ENST00000453386 MED14O60244 1454 aa19.59■□□□□ 0.73
TRA2B-205ENST00000453386 CLCN1P35523 988 aa19.59■□□□□ 0.73
TRA2B-205ENST00000453386 YTHDC2Q9H6S0 1430 aaKnown RBP19.58■□□□□ 0.73
TRA2B-205ENST00000453386 K7ELQ4 463 aaPredicted RBP19.58■□□□□ 0.73
TRA2B-205ENST00000453386 GNAI1P63096 354 aa19.58■□□□□ 0.73
TRA2B-205ENST00000453386 CALD1Q05682 793 aaKnown RBP19.58■□□□□ 0.73
TRA2B-205ENST00000453386 SIRT2Q8IXJ6 389 aa19.58■□□□□ 0.73
TRA2B-205ENST00000453386 ARHGAP45Q92619 1136 aa19.58■□□□□ 0.73
TRA2B-205ENST00000453386 PTPRMP28827 1452 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms