RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 CABLES1Q8TDN4 633 aa12.37□□□□□ -0.43
COL8A1-203ENST00000452013 USP32Q8NFA0 1604 aa12.36□□□□□ -0.43
COL8A1-203ENST00000452013 MED1Q15648 1581 aaPredicted RBP12.35□□□□□ -0.43
COL8A1-203ENST00000452013 RGS17Q9UGC6 210 aaPredicted RBP12.35□□□□□ -0.43
COL8A1-203ENST00000452013 QRICH2Q9H0J4 1663 aa12.35□□□□□ -0.43
COL8A1-203ENST00000452013 KTN1Q86UP2 1357 aaKnown RBP12.34□□□□□ -0.43
COL8A1-203ENST00000452013 NINLQ9Y2I6 1382 aa12.34□□□□□ -0.43
COL8A1-203ENST00000452013 NLRP6P59044 892 aa12.34□□□□□ -0.43
COL8A1-203ENST00000452013 NUTM2GQ5VZR2 741 aa12.34□□□□□ -0.43
COL8A1-203ENST00000452013 FNBP4Q8N3X1 1017 aaPredicted RBP12.34□□□□□ -0.43
COL8A1-203ENST00000452013 AFF2P51816 1311 aa12.34□□□□□ -0.43
COL8A1-203ENST00000452013 TTC21BQ7Z4L5 1316 aa12.34□□□□□ -0.43
COL8A1-203ENST00000452013 TTC21AQ8NDW8 1320 aa12.34□□□□□ -0.43
COL8A1-203ENST00000452013 USP6P35125 1406 aa12.33□□□□□ -0.44
COL8A1-203ENST00000452013 LRP6O75581 1613 aa12.33□□□□□ -0.44
COL8A1-203ENST00000452013 SHPRHQ149N8 1683 aa12.32□□□□□ -0.44
COL8A1-203ENST00000452013 CPSF1Q10570 1443 aaKnown RBP12.32□□□□□ -0.44
COL8A1-203ENST00000452013 POLR3GLQ9BT43 218 aa12.32□□□□□ -0.44
COL8A1-203ENST00000452013 QTRT2Q9H974 415 aaKnown RBP12.32□□□□□ -0.44
COL8A1-203ENST00000452013 USP21Q9UK80 565 aa12.32□□□□□ -0.44
COL8A1-203ENST00000452013 GCP02774 474 aa12.31□□□□□ -0.44
COL8A1-203ENST00000452013 POTEAQ6S8J7 498 aa12.31□□□□□ -0.44
COL8A1-203ENST00000452013 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.31□□□□□ -0.44
COL8A1-203ENST00000452013 FAM83GA6ND36 823 aa12.3□□□□□ -0.44
COL8A1-203ENST00000452013 RXRBP28702 533 aa12.3□□□□□ -0.44
COL8A1-203ENST00000452013 KCNH5Q8NCM2 988 aa12.3□□□□□ -0.44
COL8A1-203ENST00000452013 TRPC5Q9UL62 973 aaPredicted RBP12.3□□□□□ -0.44
COL8A1-203ENST00000452013 SSH2Q76I76 1423 aa12.29□□□□□ -0.44
COL8A1-203ENST00000452013 ZC3H6P61129 1189 aaKnown RBP12.29□□□□□ -0.44
COL8A1-203ENST00000452013 UNC5CLQ8IV45 518 aa12.29□□□□□ -0.44
COL8A1-203ENST00000452013 PRDM11Q9NQV5 511 aa12.29□□□□□ -0.44
COL8A1-203ENST00000452013 ILDR2Q71H61 639 aa12.28□□□□□ -0.44
COL8A1-203ENST00000452013 ITSN1Q15811 1721 aa12.28□□□□□ -0.44
COL8A1-203ENST00000452013 RGPD8O14715 1765 aaPredicted RBP12.28□□□□□ -0.44
COL8A1-203ENST00000452013 COL22A1Q8NFW1 1626 aaPredicted RBP12.27□□□□□ -0.44
COL8A1-203ENST00000452013 RBM6P78332 1123 aaKnown RBP12.27□□□□□ -0.45
COL8A1-203ENST00000452013 USP19O94966 1318 aa12.27□□□□□ -0.45
COL8A1-203ENST00000452013 A0A1W2PP64 1363 aa12.27□□□□□ -0.45
COL8A1-203ENST00000452013 ANKRD36BQ8N2N9 1353 aa12.27□□□□□ -0.45
COL8A1-203ENST00000452013 EDC4Q6P2E9 1401 aaKnown RBP12.27□□□□□ -0.45
COL8A1-203ENST00000452013 EVA1CP58658 441 aa12.26□□□□□ -0.45
COL8A1-203ENST00000452013 NME9Q86XW9 330 aa12.26□□□□□ -0.45
COL8A1-203ENST00000452013 BTG4Q9NY30 223 aa12.26□□□□□ -0.45
COL8A1-203ENST00000452013 TOPAZ1Q8N9V7 1692 aa12.26□□□□□ -0.45
COL8A1-203ENST00000452013 C11orf95C9JLR9 678 aaPredicted RBP12.25□□□□□ -0.45
COL8A1-203ENST00000452013 COG3Q96JB2 828 aa12.25□□□□□ -0.45
COL8A1-203ENST00000452013 USP31Q70CQ4 1352 aa12.25□□□□□ -0.45
COL8A1-203ENST00000452013 CD163L1Q9NR16 1453 aa12.25□□□□□ -0.45
COL8A1-203ENST00000452013 ZBTB7CA1YPR0 619 aa12.24□□□□□ -0.45
COL8A1-203ENST00000452013 CHRNA2Q15822 529 aa12.24□□□□□ -0.45
COL8A1-203ENST00000452013 VPS72Q15906 364 aa12.24□□□□□ -0.45
COL8A1-203ENST00000452013 KIAA0232Q92628 1395 aa12.24□□□□□ -0.45
COL8A1-203ENST00000452013 GJD4Q96KN9 370 aaPredicted RBP12.24□□□□□ -0.45
COL8A1-203ENST00000452013 ZRANB1Q9UGI0 708 aa12.24□□□□□ -0.45
COL8A1-203ENST00000452013 CCDC9Q9Y3X0 531 aaKnown RBP12.24□□□□□ -0.45
COL8A1-203ENST00000452013 TRPM3Q9HCF6 1732 aaPredicted RBP12.23□□□□□ -0.45
COL8A1-203ENST00000452013 CPDO75976 1380 aa12.23□□□□□ -0.45
COL8A1-203ENST00000452013 FYB1O15117 783 aa12.23□□□□□ -0.45
COL8A1-203ENST00000452013 SOX12O15370 315 aa12.23□□□□□ -0.45
COL8A1-203ENST00000452013 CARD14Q9BXL6 1004 aa12.23□□□□□ -0.45
COL8A1-203ENST00000452013 PANK3Q9H999 370 aa12.23□□□□□ -0.45
COL8A1-203ENST00000452013 BCL9LQ86UU0 1499 aa12.22□□□□□ -0.45
COL8A1-203ENST00000452013 ARHGEF25Q86VW2 580 aa12.22□□□□□ -0.45
COL8A1-203ENST00000452013 SLIT2O94813 1529 aa12.21□□□□□ -0.45
COL8A1-203ENST00000452013 GGNBP2Q9H3C7 697 aa12.21□□□□□ -0.45
COL8A1-203ENST00000452013 STRN4Q9NRL3 753 aa12.21□□□□□ -0.45
COL8A1-203ENST00000452013 ALS2Q96Q42 1657 aa12.21□□□□□ -0.45
COL8A1-203ENST00000452013 AATKQ6ZMQ8 1374 aa12.2□□□□□ -0.46
COL8A1-203ENST00000452013 CGNL1Q0VF96 1302 aa12.2□□□□□ -0.46
COL8A1-203ENST00000452013 KIF7Q2M1P5 1343 aa12.2□□□□□ -0.46
COL8A1-203ENST00000452013 ATRNO75882 1429 aa12.2□□□□□ -0.46
COL8A1-203ENST00000452013 KNSTRNQ9Y448 316 aa12.19□□□□□ -0.46
COL8A1-203ENST00000452013 SOCS7O14512 581 aa12.18□□□□□ -0.46
COL8A1-203ENST00000452013 ONECUT3O60422 494 aaPredicted RBP12.17□□□□□ -0.46
COL8A1-203ENST00000452013 NSD3Q9BZ95 1437 aa12.17□□□□□ -0.46
COL8A1-203ENST00000452013 SLIT3O75094 1523 aa12.16□□□□□ -0.46
COL8A1-203ENST00000452013 SPATA31A5Q5VU36 1347 aa12.16□□□□□ -0.46
COL8A1-203ENST00000452013 SPATA31A7Q8IWB4 1347 aa12.16□□□□□ -0.46
COL8A1-203ENST00000452013 CSB-PGBD3P0DP91 1061 aa12.16□□□□□ -0.46
COL8A1-203ENST00000452013 AMPHP49418 695 aa12.16□□□□□ -0.46
COL8A1-203ENST00000452013 LARP1Q6PKG0 1096 aaKnown RBP12.16□□□□□ -0.46
COL8A1-203ENST00000452013 IP6K1Q92551 441 aa12.16□□□□□ -0.46
COL8A1-203ENST00000452013 AXIN2Q9Y2T1 843 aa12.16□□□□□ -0.46
COL8A1-203ENST00000452013 CCDC7Q96M83 1385 aa12.16□□□□□ -0.46
COL8A1-203ENST00000452013 CDK12Q9NYV4 1490 aaPredicted RBP12.15□□□□□ -0.46
COL8A1-203ENST00000452013 WASHC2AQ641Q2 1341 aa12.15□□□□□ -0.46
COL8A1-203ENST00000452013 OVOS2A0A0J9YW53 1432 aa12.15□□□□□ -0.46
COL8A1-203ENST00000452013 OVOS2Q6IE36 1432 aa12.15□□□□□ -0.46
COL8A1-203ENST00000452013 A0A0G2JS52 829 aa12.15□□□□□ -0.46
COL8A1-203ENST00000452013 MYT1Q01538 1121 aa12.15□□□□□ -0.46
COL8A1-203ENST00000452013 TOM1L2Q6ZVM7 507 aa12.15□□□□□ -0.46
COL8A1-203ENST00000452013 SEPT12Q8IYM1 358 aa12.15□□□□□ -0.46
COL8A1-203ENST00000452013 THRAP3Q9Y2W1 955 aaKnown RBP12.15□□□□□ -0.46
COL8A1-203ENST00000452013 SPATA31A1Q5TZJ5 1347 aa12.14□□□□□ -0.47
COL8A1-203ENST00000452013 FAM98CQ17RN3 349 aaKnown RBP12.14□□□□□ -0.47
COL8A1-203ENST00000452013 TCP11L2Q8N4U5 519 aa12.14□□□□□ -0.47
COL8A1-203ENST00000452013 USP35Q9P2H5 1018 aa12.14□□□□□ -0.47
COL8A1-203ENST00000452013 AKAP12Q02952 1782 aa12.13□□□□□ -0.47
COL8A1-203ENST00000452013 FBLN1P23142 703 aa12.13□□□□□ -0.47
COL8A1-203ENST00000452013 BARGINQ6ZT62 677 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms