RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 KIF13AQ9H1H9 1805 aa15.64■□□□□ 0.09
COL27A1-202ENST00000451716 NCKAP5LQ9HCH0 1330 aa15.64■□□□□ 0.09
COL27A1-202ENST00000451716 PLPPR3Q6T4P5 718 aa15.63■□□□□ 0.09
COL27A1-202ENST00000451716 FGD1P98174 961 aa15.62■□□□□ 0.09
COL27A1-202ENST00000451716 BACH2Q9BYV9 841 aa15.62■□□□□ 0.09
COL27A1-202ENST00000451716 COG6Q9Y2V7 657 aa15.62■□□□□ 0.09
COL27A1-202ENST00000451716 NLRP1Q9C000 1473 aa15.62■□□□□ 0.09
COL27A1-202ENST00000451716 TNNQ9UQP3 1299 aa15.62■□□□□ 0.09
COL27A1-202ENST00000451716 CENPQQ7L2Z9 268 aaPredicted RBP15.61■□□□□ 0.09
COL27A1-202ENST00000451716 WDR63Q8IWG1 891 aa15.61■□□□□ 0.09
COL27A1-202ENST00000451716 RARSP54136 660 aaKnown RBP15.61■□□□□ 0.09
COL27A1-202ENST00000451716 TSR2Q969E8 191 aaKnown RBP15.61■□□□□ 0.09
COL27A1-202ENST00000451716 NOP58Q9Y2X3 529 aaKnown RBP15.61■□□□□ 0.09
COL27A1-202ENST00000451716 MS4A1P11836 297 aa15.6■□□□□ 0.09
COL27A1-202ENST00000451716 GLIPR1L2Q4G1C9 344 aa15.6■□□□□ 0.09
COL27A1-202ENST00000451716 PLEKHF1Q96S99 279 aa15.6■□□□□ 0.09
COL27A1-202ENST00000451716 VSIG10Q8N0Z9 540 aa15.59■□□□□ 0.09
COL27A1-202ENST00000451716 IPO9Q96P70 1041 aaKnown RBP15.59■□□□□ 0.09
COL27A1-202ENST00000451716 ZRANB1Q9UGI0 708 aa15.59■□□□□ 0.09
COL27A1-202ENST00000451716 CEBPAP49715 358 aaPredicted RBP15.59■□□□□ 0.09
COL27A1-202ENST00000451716 RGS3P49796 1198 aa15.59■□□□□ 0.09
COL27A1-202ENST00000451716 CCDC27Q2M243 656 aa15.59■□□□□ 0.09
COL27A1-202ENST00000451716 DIAPH1O60610 1272 aaKnown RBP15.58■□□□□ 0.09
COL27A1-202ENST00000451716 CLUAP1Q96AJ1 413 aa15.58■□□□□ 0.09
COL27A1-202ENST00000451716 WASLO00401 505 aaPredicted RBP15.58■□□□□ 0.08
COL27A1-202ENST00000451716 TMPOP42166 694 aaKnown RBP15.58■□□□□ 0.08
COL27A1-202ENST00000451716 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.58■□□□□ 0.08
COL27A1-202ENST00000451716 MAPK8IP3Q9UPT6 1336 aa15.58■□□□□ 0.08
COL27A1-202ENST00000451716 COL3A1P02461 1466 aaPredicted RBP15.58■□□□□ 0.08
COL27A1-202ENST00000451716 IGHDP01880 384 aa15.58■□□□□ 0.08
COL27A1-202ENST00000451716 BCL11BQ9C0K0 894 aaPredicted RBP15.58■□□□□ 0.08
COL27A1-202ENST00000451716 RLBP1P12271 317 aa15.57■□□□□ 0.08
COL27A1-202ENST00000451716 NME9Q86XW9 330 aa15.57■□□□□ 0.08
COL27A1-202ENST00000451716 SETD1AO15047 1707 aaKnown RBP15.57■□□□□ 0.08
COL27A1-202ENST00000451716 TNRQ92752 1358 aa15.57■□□□□ 0.08
COL27A1-202ENST00000451716 PDE3AQ14432 1141 aa15.57■□□□□ 0.08
COL27A1-202ENST00000451716 POLKQ9UBT6 870 aa15.57■□□□□ 0.08
COL27A1-202ENST00000451716 TRIM35Q9UPQ4 493 aa15.57■□□□□ 0.08
COL27A1-202ENST00000451716 NRXN3Q9Y4C0 1643 aa15.56■□□□□ 0.08
COL27A1-202ENST00000451716 MYH16Q9H6N6 1097 aa15.56■□□□□ 0.08
COL27A1-202ENST00000451716 NUTM2FA1L443 756 aa15.56■□□□□ 0.08
COL27A1-202ENST00000451716 NUDT16Q96DE0 195 aaKnown RBP15.55■□□□□ 0.08
COL27A1-202ENST00000451716 PPIP5K1Q6PFW1 1433 aa15.55■□□□□ 0.08
COL27A1-202ENST00000451716 RIPK4P57078 832 aa15.55■□□□□ 0.08
COL27A1-202ENST00000451716 EMILIN1Q9Y6C2 1016 aa15.55■□□□□ 0.08
COL27A1-202ENST00000451716 DLC1Q96QB1 1528 aa15.55■□□□□ 0.08
COL27A1-202ENST00000451716 NBR1Q14596 966 aa15.54■□□□□ 0.08
COL27A1-202ENST00000451716 MED14O60244 1454 aa15.54■□□□□ 0.08
COL27A1-202ENST00000451716 HMOX1P09601 288 aa15.54■□□□□ 0.08
COL27A1-202ENST00000451716 ZBTB47Q9UFB7 747 aaPredicted RBP15.54■□□□□ 0.08
COL27A1-202ENST00000451716 EXOSC9Q06265 439 aaKnown RBP15.54■□□□□ 0.08
COL27A1-202ENST00000451716 LTKP29376 864 aa15.53■□□□□ 0.08
COL27A1-202ENST00000451716 PNPLA6Q8IY17 1366 aa15.52■□□□□ 0.08
COL27A1-202ENST00000451716 TMEM2Q9UHN6 1383 aa15.52■□□□□ 0.08
COL27A1-202ENST00000451716 ADGRB2O60241 1585 aa15.52■□□□□ 0.08
COL27A1-202ENST00000451716 HDGFP51858 240 aaKnown RBP15.52■□□□□ 0.08
COL27A1-202ENST00000451716 ANKRD26Q9UPS8 1709 aa15.52■□□□□ 0.08
COL27A1-202ENST00000451716 PRKAR2BP31323 418 aa15.52■□□□□ 0.07
COL27A1-202ENST00000451716 SLC26A8Q96RN1 970 aa15.52■□□□□ 0.07
COL27A1-202ENST00000451716 AAMPQ13685 434 aa15.51■□□□□ 0.07
COL27A1-202ENST00000451716 RRS1Q15050 365 aaKnown RBP15.51■□□□□ 0.07
COL27A1-202ENST00000451716 ATP7BP35670 1465 aa15.51■□□□□ 0.07
COL27A1-202ENST00000451716 CCDC61Q9Y6R9 512 aa15.51■□□□□ 0.07
COL27A1-202ENST00000451716 ROBO2Q9HCK4 1378 aa15.51■□□□□ 0.07
COL27A1-202ENST00000451716 KIF20BQ96Q89 1820 aa15.51■□□□□ 0.07
COL27A1-202ENST00000451716 RBM10P98175 930 aaKnown RBP15.5■□□□□ 0.07
COL27A1-202ENST00000451716 PHACTR3Q96KR7 559 aa15.5■□□□□ 0.07
COL27A1-202ENST00000451716 PRR36Q9H6K5 1346 aa15.5■□□□□ 0.07
COL27A1-202ENST00000451716 CPSF1Q10570 1443 aaKnown RBP15.49■□□□□ 0.07
COL27A1-202ENST00000451716 SMC4Q9NTJ3 1288 aa15.49■□□□□ 0.07
COL27A1-202ENST00000451716 LAS1LQ9Y4W2 734 aaKnown RBP15.49■□□□□ 0.07
COL27A1-202ENST00000451716 PCDHB15Q9Y5E8 787 aa15.49■□□□□ 0.07
COL27A1-202ENST00000451716 THUMPD2Q9BTF0 503 aaKnown RBP15.49■□□□□ 0.07
COL27A1-202ENST00000451716 RSPH6AQ9H0K4 717 aa15.49■□□□□ 0.07
COL27A1-202ENST00000451716 FCHSD2O94868 740 aa15.48■□□□□ 0.07
COL27A1-202ENST00000451716 C8orf34Q49A92 452 aa15.48■□□□□ 0.07
COL27A1-202ENST00000451716 NCBP3Q53F19 620 aaKnown RBP15.48■□□□□ 0.07
COL27A1-202ENST00000451716 SSH1Q8WYL5 1049 aa15.48■□□□□ 0.07
COL27A1-202ENST00000451716 EDC4Q6P2E9 1401 aaKnown RBP15.48■□□□□ 0.07
COL27A1-202ENST00000451716 MAP2P11137 1827 aaKnown RBP15.47■□□□□ 0.07
COL27A1-202ENST00000451716 CPS1P31327 1500 aa15.47■□□□□ 0.07
COL27A1-202ENST00000451716 COG3Q96JB2 828 aa15.47■□□□□ 0.07
COL27A1-202ENST00000451716 ADAMTS13Q76LX8 1427 aa15.46■□□□□ 0.07
COL27A1-202ENST00000451716 FAM161AQ3B820 660 aa15.46■□□□□ 0.07
COL27A1-202ENST00000451716 FTSJ3Q8IY81 847 aaKnown RBP15.46■□□□□ 0.07
COL27A1-202ENST00000451716 UBR1Q8IWV7 1749 aa15.46■□□□□ 0.07
COL27A1-202ENST00000451716 LRRC7Q96NW7 1537 aa15.46■□□□□ 0.07
COL27A1-202ENST00000451716 FAM135BQ49AJ0 1406 aa15.46■□□□□ 0.06
COL27A1-202ENST00000451716 ZKSCAN2Q63HK3 967 aa15.46■□□□□ 0.06
COL27A1-202ENST00000451716 PNNQ9H307 717 aaKnown RBP15.45■□□□□ 0.06
COL27A1-202ENST00000451716 IL13P35225 146 aa15.45■□□□□ 0.06
COL27A1-202ENST00000451716 SOX12O15370 315 aa15.44■□□□□ 0.06
COL27A1-202ENST00000451716 NEFMP07197 916 aa15.44■□□□□ 0.06
COL27A1-202ENST00000451716 DZIP1LQ8IYY4 767 aaKnown RBP15.44■□□□□ 0.06
COL27A1-202ENST00000451716 TECPR2O15040 1411 aa15.44■□□□□ 0.06
COL27A1-202ENST00000451716 TRIM27P14373 513 aa15.44■□□□□ 0.06
COL27A1-202ENST00000451716 SIRT1Q96EB6 747 aa15.44■□□□□ 0.06
COL27A1-202ENST00000451716 MVPQ14764 893 aaKnown RBP15.43■□□□□ 0.06
COL27A1-202ENST00000451716 NOB1Q9ULX3 412 aaKnown RBP15.43■□□□□ 0.06
COL27A1-202ENST00000451716 ACEP12821 1306 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms