RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 ADGRB1O14514 1584 aa21.49■■□□□ 1.03
SCUBE2-202ENST00000450649 KIDINS220Q9ULH0 1771 aa21.49■■□□□ 1.03
SCUBE2-202ENST00000450649 CFAP53Q96M91 514 aa21.49■■□□□ 1.03
SCUBE2-202ENST00000450649 QRICH2Q9H0J4 1663 aa21.48■■□□□ 1.03
SCUBE2-202ENST00000450649 MTHFSP49914 203 aa21.48■■□□□ 1.03
SCUBE2-202ENST00000450649 PPP1R9BQ96SB3 815 aa21.48■■□□□ 1.03
SCUBE2-202ENST00000450649 PTMSP20962 102 aa21.48■■□□□ 1.03
SCUBE2-202ENST00000450649 ZSCAN30Q86W11 494 aa21.47■■□□□ 1.03
SCUBE2-202ENST00000450649 PUS7Q96PZ0 661 aaKnown RBP21.47■■□□□ 1.03
SCUBE2-202ENST00000450649 CHGAP10645 457 aaKnown RBP21.46■■□□□ 1.03
SCUBE2-202ENST00000450649 NASPP49321 788 aaPredicted RBP21.46■■□□□ 1.03
SCUBE2-202ENST00000450649 PPLO60437 1756 aa21.45■■□□□ 1.03
SCUBE2-202ENST00000450649 RPGRIP1LQ68CZ1 1315 aa21.45■■□□□ 1.02
SCUBE2-202ENST00000450649 OFD1O75665 1012 aa21.45■■□□□ 1.02
SCUBE2-202ENST00000450649 FOXD4L1Q9NU39 408 aa21.45■■□□□ 1.02
SCUBE2-202ENST00000450649 ITPRIPQ8IWB1 547 aa21.44■■□□□ 1.02
SCUBE2-202ENST00000450649 NPATQ14207 1427 aa21.44■■□□□ 1.02
SCUBE2-202ENST00000450649 NSD2O96028 1365 aa21.43■■□□□ 1.02
SCUBE2-202ENST00000450649 TRIM27P14373 513 aa21.43■■□□□ 1.02
SCUBE2-202ENST00000450649 DDX19BQ9UMR2 479 aa21.43■■□□□ 1.02
SCUBE2-202ENST00000450649 ANP32BQ92688 251 aaKnown RBP21.42■■□□□ 1.02
SCUBE2-202ENST00000450649 SMC4Q9NTJ3 1288 aa21.42■■□□□ 1.02
SCUBE2-202ENST00000450649 TMEM132EQ6IEE7 984 aa21.42■■□□□ 1.02
SCUBE2-202ENST00000450649 MSNP26038 577 aaKnown RBP21.41■■□□□ 1.02
SCUBE2-202ENST00000450649 CD2BP2O95400 341 aaKnown RBP21.41■■□□□ 1.02
SCUBE2-202ENST00000450649 KIF2CQ99661 725 aa21.41■■□□□ 1.02
SCUBE2-202ENST00000450649 ANKRD36BQ8N2N9 1353 aa21.41■■□□□ 1.02
SCUBE2-202ENST00000450649 RIPK4P57078 832 aa21.4■■□□□ 1.02
SCUBE2-202ENST00000450649 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.4■■□□□ 1.02
SCUBE2-202ENST00000450649 TSR2Q969E8 191 aaKnown RBP21.4■■□□□ 1.02
SCUBE2-202ENST00000450649 SENP3Q9H4L4 574 aaPredicted RBP21.4■■□□□ 1.02
SCUBE2-202ENST00000450649 CT47B1P0C2W7 299 aaPredicted RBP21.4■■□□□ 1.02
SCUBE2-202ENST00000450649 RBM10P98175 930 aaKnown RBP21.4■■□□□ 1.02
SCUBE2-202ENST00000450649 ASXL2Q76L83 1435 aa21.39■■□□□ 1.02
SCUBE2-202ENST00000450649 SSFA2P28290 1259 aa21.39■■□□□ 1.01
SCUBE2-202ENST00000450649 EVC2Q86UK5 1308 aa21.39■■□□□ 1.01
SCUBE2-202ENST00000450649 CALD1Q05682 793 aaKnown RBP21.39■■□□□ 1.01
SCUBE2-202ENST00000450649 ADGRB2O60241 1585 aa21.38■■□□□ 1.01
SCUBE2-202ENST00000450649 GOLGA6L22H0YM25 854 aa21.38■■□□□ 1.01
SCUBE2-202ENST00000450649 LNPKQ9C0E8 428 aa21.38■■□□□ 1.01
SCUBE2-202ENST00000450649 U2AF1L5P0DN76 240 aaPredicted RBP21.38■■□□□ 1.01
SCUBE2-202ENST00000450649 U2AF1Q01081 240 aaKnown RBP eCLIP21.38■■□□□ 1.01
SCUBE2-202ENST00000450649 NUCB1Q02818 461 aa21.38■■□□□ 1.01
SCUBE2-202ENST00000450649 ATF7IPQ6VMQ6 1270 aa21.38■■□□□ 1.01
SCUBE2-202ENST00000450649 DDX49Q9Y6V7 483 aaKnown RBP21.38■■□□□ 1.01
SCUBE2-202ENST00000450649 K7ELQ4 463 aaPredicted RBP21.37■■□□□ 1.01
SCUBE2-202ENST00000450649 TERF1P54274 439 aa21.37■■□□□ 1.01
SCUBE2-202ENST00000450649 EXOSC9Q06265 439 aaKnown RBP21.37■■□□□ 1.01
SCUBE2-202ENST00000450649 KLHL40Q2TBA0 621 aa21.37■■□□□ 1.01
SCUBE2-202ENST00000450649 SSH1Q8WYL5 1049 aa21.37■■□□□ 1.01
SCUBE2-202ENST00000450649 IBTKQ9P2D0 1353 aaPredicted RBP21.36■■□□□ 1.01
SCUBE2-202ENST00000450649 TMEM57Q8N5G2 664 aa21.35■■□□□ 1.01
SCUBE2-202ENST00000450649 ZBTB40Q9NUA8 1239 aa21.35■■□□□ 1.01
SCUBE2-202ENST00000450649 TULP4Q9NRJ4 1543 aa21.35■■□□□ 1.01
SCUBE2-202ENST00000450649 GLI2P10070 1586 aa21.35■■□□□ 1.01
SCUBE2-202ENST00000450649 NOB1Q9ULX3 412 aaKnown RBP21.35■■□□□ 1.01
SCUBE2-202ENST00000450649 GAS2L2Q8NHY3 880 aa21.34■■□□□ 1.01
SCUBE2-202ENST00000450649 CLEC17AQ6ZS10 378 aa21.34■■□□□ 1.01
SCUBE2-202ENST00000450649 CHD1LQ86WJ1 897 aa21.34■■□□□ 1.01
SCUBE2-202ENST00000450649 RBM42Q9BTD8 480 aaKnown RBP21.34■■□□□ 1.01
SCUBE2-202ENST00000450649 R3HCC1Q9Y3T6 440 aaKnown RBP21.34■■□□□ 1.01
SCUBE2-202ENST00000450649 FRMPD1Q5SYB0 1578 aa21.33■■□□□ 1.01
SCUBE2-202ENST00000450649 BAG4O95429 457 aaKnown RBP21.33■■□□□ 1.01
SCUBE2-202ENST00000450649 BMP2KLQ5H9B9 411 aa21.33■■□□□ 1.01
SCUBE2-202ENST00000450649 GGT6Q6P531 493 aa21.33■■□□□ 1
SCUBE2-202ENST00000450649 FAM13BQ9NYF5 915 aa21.33■■□□□ 1
SCUBE2-202ENST00000450649 MLH3Q9UHC1 1453 aa21.33■■□□□ 1
SCUBE2-202ENST00000450649 HECW2Q9P2P5 1572 aa21.32■■□□□ 1
SCUBE2-202ENST00000450649 ARHGEF28Q8N1W1 1705 aaKnown RBP21.31■■□□□ 1
SCUBE2-202ENST00000450649 VGFO15240 615 aaPredicted RBP21.31■■□□□ 1
SCUBE2-202ENST00000450649 PRDM4Q9UKN5 801 aa21.31■■□□□ 1
SCUBE2-202ENST00000450649 POGZQ7Z3K3 1410 aa21.31■■□□□ 1
SCUBE2-202ENST00000450649 ABCC3O15438 1527 aa21.31■■□□□ 1
SCUBE2-202ENST00000450649 CFAP65Q6ZU64 1925 aaKnown RBP21.3■■□□□ 1
SCUBE2-202ENST00000450649 ZNF445P59923 1031 aa21.3■■□□□ 1
SCUBE2-202ENST00000450649 HS1BP3Q53T59 392 aa21.3■■□□□ 1
SCUBE2-202ENST00000450649 PLEKHF1Q96S99 279 aa21.3■■□□□ 1
SCUBE2-202ENST00000450649 MAP7D2Q96T17 732 aa21.3■■□□□ 1
SCUBE2-202ENST00000450649 ABCC11Q96J66 1382 aa21.29■■□□□ 1
SCUBE2-202ENST00000450649 NOL7Q9UMY1 257 aaKnown RBP21.28■■□□□ 1
SCUBE2-202ENST00000450649 CABP2Q9NPB3 220 aa21.28■■□□□ 1
SCUBE2-202ENST00000450649 TMPOP42166 694 aaKnown RBP21.28■■□□□ 1
SCUBE2-202ENST00000450649 TBC1D9Q6ZT07 1266 aa21.28■■□□□ 1
SCUBE2-202ENST00000450649 CD109Q6YHK3 1445 aa21.28■■□□□ 1
SCUBE2-202ENST00000450649 ZNF500O60304 480 aaPredicted RBP21.27■■□□□ 1
SCUBE2-202ENST00000450649 IL16Q14005 1332 aa21.27■■□□□ 1
SCUBE2-202ENST00000450649 NEXMIFQ5QGS0 1516 aa21.27■■□□□ 1
SCUBE2-202ENST00000450649 NCLP19338 710 aaKnown RBP21.27■■□□□ 1
SCUBE2-202ENST00000450649 CAVIN1Q6NZI2 390 aaKnown RBP21.27■■□□□ 1
SCUBE2-202ENST00000450649 XPCQ01831 940 aaPredicted RBP21.26■□□□□ 0.99
SCUBE2-202ENST00000450649 MCTP1Q6DN14 999 aa21.26■□□□□ 0.99
SCUBE2-202ENST00000450649 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.26■□□□□ 0.99
SCUBE2-202ENST00000450649 TRIM35Q9UPQ4 493 aa21.26■□□□□ 0.99
SCUBE2-202ENST00000450649 CAMSAP1Q5T5Y3 1602 aa21.26■□□□□ 0.99
SCUBE2-202ENST00000450649 ZSCAN23Q3MJ62 389 aa21.26■□□□□ 0.99
SCUBE2-202ENST00000450649 PIK3C2BO00750 1634 aa21.26■□□□□ 0.99
SCUBE2-202ENST00000450649 ANKRD45Q5TZF3 282 aa21.25■□□□□ 0.99
SCUBE2-202ENST00000450649 RBSNQ9H1K0 784 aa21.25■□□□□ 0.99
SCUBE2-202ENST00000450649 CFAP74Q9C0B2 1584 aa21.25■□□□□ 0.99
SCUBE2-202ENST00000450649 A0A1W2PP64 1363 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms