RNA–Protein interactions for RNA: ENST00000450102.6

SCN5A-208, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 6,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-208ENST00000450102 GBP2P32456 591 aaPredicted RBP12.92□□□□□ -0.34
SCN5A-208ENST00000450102 RNF214Q8ND24 703 aa12.92□□□□□ -0.34
SCN5A-208ENST00000450102 STIM1Q13586 685 aa12.92□□□□□ -0.34
SCN5A-208ENST00000450102 CLASRPQ8N2M8 674 aaKnown RBP12.92□□□□□ -0.34
SCN5A-208ENST00000450102 CEBPZQ03701 1054 aaKnown RBP12.92□□□□□ -0.34
SCN5A-208ENST00000450102 SOGA3Q5TF21 947 aa12.92□□□□□ -0.34
SCN5A-208ENST00000450102 STK38Q15208 465 aa12.91□□□□□ -0.34
SCN5A-208ENST00000450102 ZNF396Q96N95 335 aaPredicted RBP12.91□□□□□ -0.34
SCN5A-208ENST00000450102 CENPHQ9H3R5 247 aa12.91□□□□□ -0.34
SCN5A-208ENST00000450102 LETM1O95202 739 aaPredicted RBP12.91□□□□□ -0.34
SCN5A-208ENST00000450102 KANK4Q5T7N3 995 aaPredicted RBP12.91□□□□□ -0.34
SCN5A-208ENST00000450102 CCDC112Q8NEF3 446 aa12.91□□□□□ -0.34
SCN5A-208ENST00000450102 CCDC158Q5M9N0 1113 aa12.91□□□□□ -0.34
SCN5A-208ENST00000450102 KIAA0754O94854 1291 aa12.9□□□□□ -0.34
SCN5A-208ENST00000450102 TRIM21P19474 475 aaKnown RBP12.9□□□□□ -0.34
SCN5A-208ENST00000450102 SERPINC1P01008 464 aa12.9□□□□□ -0.34
SCN5A-208ENST00000450102 PPFIBP1Q86W92 1011 aa12.9□□□□□ -0.34
SCN5A-208ENST00000450102 C22orf23Q9BZE7 217 aa12.9□□□□□ -0.34
SCN5A-208ENST00000450102 CDC45O75419 566 aa12.9□□□□□ -0.34
SCN5A-208ENST00000450102 PRKCSHP14314 528 aaPredicted RBP12.9□□□□□ -0.34
SCN5A-208ENST00000450102 ZSCAN29Q8IWY8 852 aaPredicted RBP12.9□□□□□ -0.34
SCN5A-208ENST00000450102 SSR1P43307 286 aaKnown RBP12.89□□□□□ -0.35
SCN5A-208ENST00000450102 TXLNBQ8N3L3 684 aa12.89□□□□□ -0.35
SCN5A-208ENST00000450102 STRN4Q9NRL3 753 aa12.89□□□□□ -0.35
SCN5A-208ENST00000450102 ERC1Q8IUD2 1116 aa12.89□□□□□ -0.35
SCN5A-208ENST00000450102 SURF6O75683 361 aaKnown RBP12.89□□□□□ -0.35
SCN5A-208ENST00000450102 RABEP1Q15276 862 aa12.89□□□□□ -0.35
SCN5A-208ENST00000450102 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.89□□□□□ -0.35
SCN5A-208ENST00000450102 SSBP05455 408 aaKnown RBP eCLIP12.89□□□□□ -0.35
SCN5A-208ENST00000450102 HMGN5P82970 282 aaKnown RBP12.89□□□□□ -0.35
SCN5A-208ENST00000450102 RUNDC1Q96C34 613 aa12.89□□□□□ -0.35
SCN5A-208ENST00000450102 NASPP49321 788 aaPredicted RBP12.88□□□□□ -0.35
SCN5A-208ENST00000450102 CCDC69A6NI79 296 aa12.88□□□□□ -0.35
SCN5A-208ENST00000450102 HIP1O00291 1037 aa12.88□□□□□ -0.35
SCN5A-208ENST00000450102 ZNF76P36508 570 aa12.88□□□□□ -0.35
SCN5A-208ENST00000450102 CYB5RLQ6IPT4 315 aa12.88□□□□□ -0.35
SCN5A-208ENST00000450102 KIF7Q2M1P5 1343 aa12.88□□□□□ -0.35
SCN5A-208ENST00000450102 TRIM22Q8IYM9 498 aa12.88□□□□□ -0.35
SCN5A-208ENST00000450102 JMYQ8N9B5 988 aa12.88□□□□□ -0.35
SCN5A-208ENST00000450102 NACAP1Q9BZK3 213 aa12.87□□□□□ -0.35
SCN5A-208ENST00000450102 CCDC66A2RUB6 948 aa12.87□□□□□ -0.35
SCN5A-208ENST00000450102 SPDYE4A6NLX3 237 aa12.87□□□□□ -0.35
SCN5A-208ENST00000450102 CHMP4BP1P59074 171 aa12.87□□□□□ -0.35
SCN5A-208ENST00000450102 DACH1Q9UI36 760 aa12.87□□□□□ -0.35
SCN5A-208ENST00000450102 NUP133Q8WUM0 1156 aa12.87□□□□□ -0.35
SCN5A-208ENST00000450102 MYO15BQ96JP2 1530 aa12.87□□□□□ -0.35
SCN5A-208ENST00000450102 PDCP20941 246 aa12.87□□□□□ -0.35
SCN5A-208ENST00000450102 NLRP6P59044 892 aa12.87□□□□□ -0.35
SCN5A-208ENST00000450102 BMP2KQ9NSY1 1161 aaPredicted RBP12.87□□□□□ -0.35
SCN5A-208ENST00000450102 CCDC30Q5VVM6 783 aa12.86□□□□□ -0.35
SCN5A-208ENST00000450102 TMEM87AQ8NBN3 555 aa12.86□□□□□ -0.35
SCN5A-208ENST00000450102 NUTM2BA6NNL0 878 aaPredicted RBP12.86□□□□□ -0.35
SCN5A-208ENST00000450102 NUTM2EB1AL46 878 aaPredicted RBP12.86□□□□□ -0.35
SCN5A-208ENST00000450102 NUTM2AQ8IVF1 878 aaPredicted RBP12.86□□□□□ -0.35
SCN5A-208ENST00000450102 TSPY26PQ9H489 355 aa12.86□□□□□ -0.35
SCN5A-208ENST00000450102 SPC24Q8NBT2 197 aa12.85□□□□□ -0.35
SCN5A-208ENST00000450102 FAM193AP78312 1265 aa12.85□□□□□ -0.35
SCN5A-208ENST00000450102 DNAI2Q9GZS0 605 aa12.85□□□□□ -0.35
SCN5A-208ENST00000450102 SCLT1Q96NL6 688 aa12.85□□□□□ -0.35
SCN5A-208ENST00000450102 INCENPQ9NQS7 918 aa12.85□□□□□ -0.35
SCN5A-208ENST00000450102 ANAPC15P60006 121 aa12.85□□□□□ -0.35
SCN5A-208ENST00000450102 GNAI3P08754 354 aa12.85□□□□□ -0.35
SCN5A-208ENST00000450102 NOL7Q9UMY1 257 aaKnown RBP12.85□□□□□ -0.35
SCN5A-208ENST00000450102 CCDC18Q5T9S5 1454 aa12.84□□□□□ -0.35
SCN5A-208ENST00000450102 CCDC57Q2TAC2 916 aa12.84□□□□□ -0.35
SCN5A-208ENST00000450102 CAVIN1Q6NZI2 390 aaKnown RBP12.84□□□□□ -0.35
SCN5A-208ENST00000450102 STK3Q13188 491 aa12.84□□□□□ -0.35
SCN5A-208ENST00000450102 FIBPO43427 364 aa12.84□□□□□ -0.35
SCN5A-208ENST00000450102 POTEJP0CG39 1038 aa12.84□□□□□ -0.35
SCN5A-208ENST00000450102 PLEKHO1Q53GL0 409 aaPredicted RBP12.84□□□□□ -0.35
SCN5A-208ENST00000450102 TDRD9Q8NDG6 1382 aaKnown RBP12.83□□□□□ -0.35
SCN5A-208ENST00000450102 FAM177A1Q8N128 213 aaPredicted RBP12.83□□□□□ -0.36
SCN5A-208ENST00000450102 LRRFIP2Q9Y608 721 aaKnown RBP12.83□□□□□ -0.36
SCN5A-208ENST00000450102 SOGA1O94964 1423 aa12.83□□□□□ -0.36
SCN5A-208ENST00000450102 NEK4P51957 841 aa12.83□□□□□ -0.36
SCN5A-208ENST00000450102 MPHOSPH8Q99549 860 aa12.83□□□□□ -0.36
SCN5A-208ENST00000450102 GPRASP1Q5JY77 1395 aa12.83□□□□□ -0.36
SCN5A-208ENST00000450102 JAKMIP3Q5VZ66 844 aa12.83□□□□□ -0.36
SCN5A-208ENST00000450102 CCDC91Q7Z6B0 441 aa12.83□□□□□ -0.36
SCN5A-208ENST00000450102 ABTB2Q8N961 1025 aa12.83□□□□□ -0.36
SCN5A-208ENST00000450102 WDHD1O75717 1129 aaPredicted RBP12.82□□□□□ -0.36
SCN5A-208ENST00000450102 ME1P48163 572 aa12.82□□□□□ -0.36
SCN5A-208ENST00000450102 ESCO1Q5FWF5 840 aa12.82□□□□□ -0.36
SCN5A-208ENST00000450102 BAZ1AQ9NRL2 1556 aaPredicted RBP12.82□□□□□ -0.36
SCN5A-208ENST00000450102 USP5P45974 858 aa12.82□□□□□ -0.36
SCN5A-208ENST00000450102 MYCNP04198 464 aaPredicted RBP12.82□□□□□ -0.36
SCN5A-208ENST00000450102 MTERF4Q7Z6M4 381 aaKnown RBP12.82□□□□□ -0.36
SCN5A-208ENST00000450102 PAXIP1Q6ZW49 1069 aaPredicted RBP12.82□□□□□ -0.36
SCN5A-208ENST00000450102 GGNBP2Q9H3C7 697 aa12.82□□□□□ -0.36
SCN5A-208ENST00000450102 PRPF40AO75400 957 aaKnown RBP12.81□□□□□ -0.36
SCN5A-208ENST00000450102 MBD3O95983 291 aa12.81□□□□□ -0.36
SCN5A-208ENST00000450102 ZNF428Q96B54 188 aa12.81□□□□□ -0.36
SCN5A-208ENST00000450102 ERLIN1O75477 346 aa12.81□□□□□ -0.36
SCN5A-208ENST00000450102 CABP4P57796 275 aa12.81□□□□□ -0.36
SCN5A-208ENST00000450102 TATP17735 454 aaPredicted RBP12.81□□□□□ -0.36
SCN5A-208ENST00000450102 CETN2P41208 172 aa12.81□□□□□ -0.36
SCN5A-208ENST00000450102 MRE11P49959 708 aa12.81□□□□□ -0.36
SCN5A-208ENST00000450102 TAF4BQ92750 862 aa12.81□□□□□ -0.36
SCN5A-208ENST00000450102 VPS8Q8N3P4 1428 aa12.81□□□□□ -0.36
SCN5A-208ENST00000450102 TAF3Q5VWG9 929 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms