RNA–Protein interactions for RNA: ENST00000449911.2

SSU72P1-201, Transcript of SSU72 pseudogene 1, humanhuman

BASIC

Gene SSU72P1, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72P1-201ENST00000449911 PHF8Q9UPP1 1060 aa13.56□□□□□ -0.24
SSU72P1-201ENST00000449911 QRICH2Q9H0J4 1663 aa13.56□□□□□ -0.24
SSU72P1-201ENST00000449911 FOXO3O43524 673 aa13.55□□□□□ -0.24
SSU72P1-201ENST00000449911 GABBR2O75899 941 aa13.55□□□□□ -0.24
SSU72P1-201ENST00000449911 CD44P16070 742 aaKnown RBP13.55□□□□□ -0.24
SSU72P1-201ENST00000449911 SOS2Q07890 1332 aaPredicted RBP13.55□□□□□ -0.24
SSU72P1-201ENST00000449911 USP32Q8NFA0 1604 aa13.53□□□□□ -0.24
SSU72P1-201ENST00000449911 ITSN1Q15811 1721 aa13.53□□□□□ -0.24
SSU72P1-201ENST00000449911 SRPK2P78362 688 aaKnown RBP13.53□□□□□ -0.24
SSU72P1-201ENST00000449911 PSME1Q06323 249 aa13.53□□□□□ -0.24
SSU72P1-201ENST00000449911 MEX3CQ5U5Q3 659 aaKnown RBP13.53□□□□□ -0.24
SSU72P1-201ENST00000449911 CDK19Q9BWU1 502 aa13.53□□□□□ -0.24
SSU72P1-201ENST00000449911 PXDNQ92626 1479 aa13.53□□□□□ -0.24
SSU72P1-201ENST00000449911 EVC2Q86UK5 1308 aa13.52□□□□□ -0.25
SSU72P1-201ENST00000449911 PNPLA6Q8IY17 1366 aa13.52□□□□□ -0.25
SSU72P1-201ENST00000449911 ATP7BP35670 1465 aa13.52□□□□□ -0.25
SSU72P1-201ENST00000449911 RGPD8O14715 1765 aaPredicted RBP13.51□□□□□ -0.25
SSU72P1-201ENST00000449911 PRR36Q9H6K5 1346 aa13.51□□□□□ -0.25
SSU72P1-201ENST00000449911 XPCQ01831 940 aaPredicted RBP13.51□□□□□ -0.25
SSU72P1-201ENST00000449911 NGDNQ8NEJ9 315 aaKnown RBP13.51□□□□□ -0.25
SSU72P1-201ENST00000449911 PMFBP1Q8TBY8 1022 aa13.51□□□□□ -0.25
SSU72P1-201ENST00000449911 NUDT16Q96DE0 195 aaKnown RBP13.51□□□□□ -0.25
SSU72P1-201ENST00000449911 NUTM2BA6NNL0 878 aaPredicted RBP13.5□□□□□ -0.25
SSU72P1-201ENST00000449911 NUTM2EB1AL46 878 aaPredicted RBP13.5□□□□□ -0.25
SSU72P1-201ENST00000449911 KRT28Q7Z3Y7 464 aa13.5□□□□□ -0.25
SSU72P1-201ENST00000449911 NUTM2AQ8IVF1 878 aaPredicted RBP13.5□□□□□ -0.25
SSU72P1-201ENST00000449911 PROM2Q8N271 834 aa13.49□□□□□ -0.25
SSU72P1-201ENST00000449911 CCDC61Q9Y6R9 512 aa13.49□□□□□ -0.25
SSU72P1-201ENST00000449911 TNS3Q68CZ2 1445 aa13.48□□□□□ -0.25
SSU72P1-201ENST00000449911 SBNO1A3KN83 1393 aa13.48□□□□□ -0.25
SSU72P1-201ENST00000449911 SBNO2Q9Y2G9 1366 aa13.48□□□□□ -0.25
SSU72P1-201ENST00000449911 LRP6O75581 1613 aa13.48□□□□□ -0.25
SSU72P1-201ENST00000449911 ARHGEF10O15013 1369 aa13.47□□□□□ -0.25
SSU72P1-201ENST00000449911 TOPAZ1Q8N9V7 1692 aa13.47□□□□□ -0.25
SSU72P1-201ENST00000449911 COL22A1Q8NFW1 1626 aaPredicted RBP13.47□□□□□ -0.25
SSU72P1-201ENST00000449911 SPATA31A3Q5VYP0 1347 aa13.47□□□□□ -0.25
SSU72P1-201ENST00000449911 SLC24A1O60721 1099 aa13.47□□□□□ -0.25
SSU72P1-201ENST00000449911 LMOD2Q6P5Q4 547 aa13.47□□□□□ -0.25
SSU72P1-201ENST00000449911 CABP2Q9NPB3 220 aa13.47□□□□□ -0.25
SSU72P1-201ENST00000449911 PPIP5K1Q6PFW1 1433 aa13.47□□□□□ -0.25
SSU72P1-201ENST00000449911 ATAD2Q6PL18 1390 aa13.45□□□□□ -0.26
SSU72P1-201ENST00000449911 HAP1P54257 671 aaPredicted RBP13.45□□□□□ -0.26
SSU72P1-201ENST00000449911 USP47Q96K76 1375 aa13.45□□□□□ -0.26
SSU72P1-201ENST00000449911 PLEKHG3A1L390 1219 aa13.44□□□□□ -0.26
SSU72P1-201ENST00000449911 PAK3O75914 559 aaPredicted RBP13.44□□□□□ -0.26
SSU72P1-201ENST00000449911 POLR3AO14802 1390 aaPredicted RBP13.44□□□□□ -0.26
SSU72P1-201ENST00000449911 ACEP12821 1306 aa13.43□□□□□ -0.26
SSU72P1-201ENST00000449911 ADAMTS2O95450 1211 aa13.43□□□□□ -0.26
SSU72P1-201ENST00000449911 C8orf37Q96NL8 207 aa13.43□□□□□ -0.26
SSU72P1-201ENST00000449911 TRPM3Q9HCF6 1732 aaPredicted RBP13.42□□□□□ -0.26
SSU72P1-201ENST00000449911 ST20-MTHFSA0A0A6YYL1 179 aa13.42□□□□□ -0.26
SSU72P1-201ENST00000449911 ZNF772Q68DY9 489 aaPredicted RBP13.42□□□□□ -0.26
SSU72P1-201ENST00000449911 CLCN6P51797 869 aa13.41□□□□□ -0.26
SSU72P1-201ENST00000449911 CABP1Q9NZU7 370 aa13.41□□□□□ -0.26
SSU72P1-201ENST00000449911 PLEKHG5O94827 1062 aa13.4□□□□□ -0.26
SSU72P1-201ENST00000449911 NGLY1Q96IV0 654 aa13.4□□□□□ -0.26
SSU72P1-201ENST00000449911 BRD4O60885 1362 aaPredicted RBP13.4□□□□□ -0.26
SSU72P1-201ENST00000449911 AFF2P51816 1311 aa13.39□□□□□ -0.27
SSU72P1-201ENST00000449911 ALS2Q96Q42 1657 aa13.39□□□□□ -0.27
SSU72P1-201ENST00000449911 TMF1P82094 1093 aa13.38□□□□□ -0.27
SSU72P1-201ENST00000449911 CDCA8Q53HL2 280 aa13.38□□□□□ -0.27
SSU72P1-201ENST00000449911 PUS7Q96PZ0 661 aaKnown RBP13.38□□□□□ -0.27
SSU72P1-201ENST00000449911 RGS17Q9UGC6 210 aaPredicted RBP13.38□□□□□ -0.27
SSU72P1-201ENST00000449911 ZNF579Q8NAF0 562 aaKnown RBP13.37□□□□□ -0.27
SSU72P1-201ENST00000449911 TMC1Q8TDI8 760 aa13.37□□□□□ -0.27
SSU72P1-201ENST00000449911 TESK2Q96S53 571 aa13.37□□□□□ -0.27
SSU72P1-201ENST00000449911 USP6P35125 1406 aa13.37□□□□□ -0.27
SSU72P1-201ENST00000449911 MARF1Q9Y4F3 1742 aaKnown RBP13.36□□□□□ -0.27
SSU72P1-201ENST00000449911 NINLQ9Y2I6 1382 aa13.36□□□□□ -0.27
SSU72P1-201ENST00000449911 MNX1P50219 401 aaPredicted RBP13.36□□□□□ -0.27
SSU72P1-201ENST00000449911 ILDR2Q71H61 639 aa13.36□□□□□ -0.27
SSU72P1-201ENST00000449911 HDGFL2Q7Z4V5 671 aaPredicted RBP13.36□□□□□ -0.27
SSU72P1-201ENST00000449911 ABTB2Q8N961 1025 aa13.36□□□□□ -0.27
SSU72P1-201ENST00000449911 CABLES1Q8TDN4 633 aa13.36□□□□□ -0.27
SSU72P1-201ENST00000449911 ZRANB1Q9UGI0 708 aa13.36□□□□□ -0.27
SSU72P1-201ENST00000449911 ABCA3Q99758 1704 aa13.36□□□□□ -0.27
SSU72P1-201ENST00000449911 TERF2IPQ9NYB0 399 aa13.35□□□□□ -0.27
SSU72P1-201ENST00000449911 USP21Q9UK80 565 aa13.35□□□□□ -0.27
SSU72P1-201ENST00000449911 KTN1Q86UP2 1357 aaKnown RBP13.34□□□□□ -0.27
SSU72P1-201ENST00000449911 EIF4G2P78344 907 aaKnown RBP eCLIP13.34□□□□□ -0.27
SSU72P1-201ENST00000449911 POTEAQ6S8J7 498 aa13.34□□□□□ -0.27
SSU72P1-201ENST00000449911 NUTM2GQ5VZR2 741 aa13.33□□□□□ -0.28
SSU72P1-201ENST00000449911 NLRP13Q86W25 1043 aa13.33□□□□□ -0.28
SSU72P1-201ENST00000449911 FNBP4Q8N3X1 1017 aaPredicted RBP13.33□□□□□ -0.28
SSU72P1-201ENST00000449911 TTC21AQ8NDW8 1320 aa13.33□□□□□ -0.28
SSU72P1-201ENST00000449911 AKAP12Q02952 1782 aa13.32□□□□□ -0.28
SSU72P1-201ENST00000449911 CPSF1Q10570 1443 aaKnown RBP13.32□□□□□ -0.28
SSU72P1-201ENST00000449911 RXRBP28702 533 aa13.32□□□□□ -0.28
SSU72P1-201ENST00000449911 TRPC5Q9UL62 973 aaPredicted RBP13.32□□□□□ -0.28
SSU72P1-201ENST00000449911 PHRF1Q9P1Y6 1649 aaKnown RBP13.31□□□□□ -0.28
SSU72P1-201ENST00000449911 QTRT2Q9H974 415 aaKnown RBP13.31□□□□□ -0.28
SSU72P1-201ENST00000449911 PRDM11Q9NQV5 511 aa13.31□□□□□ -0.28
SSU72P1-201ENST00000449911 TTC21BQ7Z4L5 1316 aa13.31□□□□□ -0.28
SSU72P1-201ENST00000449911 MON2Q7Z3U7 1717 aa13.3□□□□□ -0.28
SSU72P1-201ENST00000449911 CRYBG1Q9Y4K1 1723 aa13.3□□□□□ -0.28
SSU72P1-201ENST00000449911 NRKQ7Z2Y5 1582 aa13.3□□□□□ -0.28
SSU72P1-201ENST00000449911 NLRP6P59044 892 aa13.3□□□□□ -0.28
SSU72P1-201ENST00000449911 SLC12A5Q9H2X9 1139 aa13.3□□□□□ -0.28
SSU72P1-201ENST00000449911 USP19O94966 1318 aa13.3□□□□□ -0.28
SSU72P1-201ENST00000449911 COL14A1Q05707 1796 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms