RNA–Protein interactions for RNA: ENST00000449600.1

NPHP1-208, Transcript of nephrocystin 1, humanhuman

TSL 3

Gene NPHP1, Length 486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-208ENST00000449600 NKTRP30414 1462 aaKnown RBP12.19□□□□□ -0.46
NPHP1-208ENST00000449600 MSH6P52701 1360 aa12.18□□□□□ -0.46
NPHP1-208ENST00000449600 UBR1Q8IWV7 1749 aa12.18□□□□□ -0.46
NPHP1-208ENST00000449600 KIF3BO15066 747 aa12.18□□□□□ -0.46
NPHP1-208ENST00000449600 LRP5O75197 1615 aa12.18□□□□□ -0.46
NPHP1-208ENST00000449600 CCNB3Q8WWL7 1395 aa12.18□□□□□ -0.46
NPHP1-208ENST00000449600 AFF2P51816 1311 aa12.17□□□□□ -0.46
NPHP1-208ENST00000449600 NUTM2BA6NNL0 878 aaPredicted RBP12.17□□□□□ -0.46
NPHP1-208ENST00000449600 NUTM2EB1AL46 878 aaPredicted RBP12.17□□□□□ -0.46
NPHP1-208ENST00000449600 NUTM2DQ5VT03 806 aaPredicted RBP12.17□□□□□ -0.46
NPHP1-208ENST00000449600 PROSER2Q86WR7 435 aaPredicted RBP12.17□□□□□ -0.46
NPHP1-208ENST00000449600 CCDC125Q86Z20 511 aa12.17□□□□□ -0.46
NPHP1-208ENST00000449600 NUTM2AQ8IVF1 878 aaPredicted RBP12.17□□□□□ -0.46
NPHP1-208ENST00000449600 AHDC1Q5TGY3 1603 aaPredicted RBP12.17□□□□□ -0.46
NPHP1-208ENST00000449600 ERVK-7P63135 1459 aa12.16□□□□□ -0.46
NPHP1-208ENST00000449600 FAM50AQ14320 339 aaKnown RBP12.16□□□□□ -0.46
NPHP1-208ENST00000449600 IFFO2Q5TF58 517 aa12.16□□□□□ -0.46
NPHP1-208ENST00000449600 MBD5Q9P267 1494 aa12.15□□□□□ -0.46
NPHP1-208ENST00000449600 RRBP1Q9P2E9 1410 aaKnown RBP12.15□□□□□ -0.46
NPHP1-208ENST00000449600 CAMSAP2Q08AD1 1489 aa12.14□□□□□ -0.47
NPHP1-208ENST00000449600 NWD1Q149M9 1564 aa12.14□□□□□ -0.47
NPHP1-208ENST00000449600 TBC1D12O60347 775 aa12.14□□□□□ -0.47
NPHP1-208ENST00000449600 OXER1Q8TDS5 423 aa12.14□□□□□ -0.47
NPHP1-208ENST00000449600 KCTD12Q96CX2 325 aaKnown RBP12.14□□□□□ -0.47
NPHP1-208ENST00000449600 QTRT2Q9H974 415 aaKnown RBP12.14□□□□□ -0.47
NPHP1-208ENST00000449600 CFDP1Q9UEE9 299 aaPredicted RBP12.14□□□□□ -0.47
NPHP1-208ENST00000449600 EID1Q9Y6B2 187 aa12.14□□□□□ -0.47
NPHP1-208ENST00000449600 KCNK17Q96T54 332 aa12.13□□□□□ -0.47
NPHP1-208ENST00000449600 DIP2AQ14689 1571 aa12.13□□□□□ -0.47
NPHP1-208ENST00000449600 TET3O43151 1660 aa12.13□□□□□ -0.47
NPHP1-208ENST00000449600 MYOM3Q5VTT5 1437 aa12.12□□□□□ -0.47
NPHP1-208ENST00000449600 NGLY1Q96IV0 654 aa12.12□□□□□ -0.47
NPHP1-208ENST00000449600 TMEM2Q9UHN6 1383 aa12.12□□□□□ -0.47
NPHP1-208ENST00000449600 NCOA3Q9Y6Q9 1424 aa12.11□□□□□ -0.47
NPHP1-208ENST00000449600 VPS9D1Q9Y2B5 631 aa12.11□□□□□ -0.47
NPHP1-208ENST00000449600 ITGAEP38570 1179 aa12.1□□□□□ -0.47
NPHP1-208ENST00000449600 KDM5AP29375 1690 aaKnown RBP12.1□□□□□ -0.47
NPHP1-208ENST00000449600 NKX1-1Q15270 411 aaPredicted RBP12.09□□□□□ -0.47
NPHP1-208ENST00000449600 CRISPLD2Q9H0B8 497 aa12.09□□□□□ -0.47
NPHP1-208ENST00000449600 SETD5Q9C0A6 1442 aa12.08□□□□□ -0.48
NPHP1-208ENST00000449600 SLC4A5Q9BY07 1137 aa12.06□□□□□ -0.48
NPHP1-208ENST00000449600 BCL2L12Q9HB09 334 aa12.06□□□□□ -0.48
NPHP1-208ENST00000449600 NHSL1Q5SYE7 1610 aa12.06□□□□□ -0.48
NPHP1-208ENST00000449600 CADPS2Q86UW7 1296 aa12.05□□□□□ -0.48
NPHP1-208ENST00000449600 SLC26A8Q96RN1 970 aa12.05□□□□□ -0.48
NPHP1-208ENST00000449600 ZNF644Q9H582 1327 aaPredicted RBP12.05□□□□□ -0.48
NPHP1-208ENST00000449600 ZNF454Q8N9F8 522 aa12.04□□□□□ -0.48
NPHP1-208ENST00000449600 C8orf37Q96NL8 207 aa12.04□□□□□ -0.48
NPHP1-208ENST00000449600 PTPN23Q9H3S7 1636 aa12.04□□□□□ -0.48
NPHP1-208ENST00000449600 ARHGAP31Q2M1Z3 1444 aa12.03□□□□□ -0.48
NPHP1-208ENST00000449600 BHMG1C9JSJ3 638 aaPredicted RBP12.03□□□□□ -0.48
NPHP1-208ENST00000449600 CHGAP10645 457 aaKnown RBP12.03□□□□□ -0.48
NPHP1-208ENST00000449600 STAC3Q96MF2 364 aa12.03□□□□□ -0.48
NPHP1-208ENST00000449600 FOSBP53539 338 aa12.02□□□□□ -0.49
NPHP1-208ENST00000449600 RSPH4AQ5TD94 716 aa12.02□□□□□ -0.49
NPHP1-208ENST00000449600 CCDC141Q6ZP82 1450 aa12.02□□□□□ -0.49
NPHP1-208ENST00000449600 MAST1Q9Y2H9 1570 aa12.01□□□□□ -0.49
NPHP1-208ENST00000449600 MROH1Q8NDA8 1641 aa12.01□□□□□ -0.49
NPHP1-208ENST00000449600 YY1P25490 414 aa12.01□□□□□ -0.49
NPHP1-208ENST00000449600 PPP1R15BQ5SWA1 713 aa12.01□□□□□ -0.49
NPHP1-208ENST00000449600 BRINP3Q76B58 766 aa12.01□□□□□ -0.49
NPHP1-208ENST00000449600 CCER1Q8TC90 406 aaPredicted RBP12.01□□□□□ -0.49
NPHP1-208ENST00000449600 C19orf44Q9H6X5 657 aa12.01□□□□□ -0.49
NPHP1-208ENST00000449600 BLMP54132 1417 aaPredicted RBP12.01□□□□□ -0.49
NPHP1-208ENST00000449600 LRRC59Q96AG4 307 aaKnown RBP12□□□□□ -0.49
NPHP1-208ENST00000449600 TRPC5Q9UL62 973 aaPredicted RBP12□□□□□ -0.49
NPHP1-208ENST00000449600 EFCAB6Q5THR3 1501 aa12□□□□□ -0.49
NPHP1-208ENST00000449600 PIK3C2BO00750 1634 aa12□□□□□ -0.49
NPHP1-208ENST00000449600 ZEB1P37275 1124 aaPredicted RBP11.99□□□□□ -0.49
NPHP1-208ENST00000449600 PTPN5P54829 565 aa11.99□□□□□ -0.49
NPHP1-208ENST00000449600 ZBED2Q9BTP6 218 aa11.99□□□□□ -0.49
NPHP1-208ENST00000449600 ANO8Q9HCE9 1232 aaPredicted RBP11.99□□□□□ -0.49
NPHP1-208ENST00000449600 BCL9LQ86UU0 1499 aa11.99□□□□□ -0.49
NPHP1-208ENST00000449600 ATRNO75882 1429 aa11.98□□□□□ -0.49
NPHP1-208ENST00000449600 PNPLA6Q8IY17 1366 aa11.98□□□□□ -0.49
NPHP1-208ENST00000449600 ATF3P18847 181 aa11.98□□□□□ -0.49
NPHP1-208ENST00000449600 HRCP23327 699 aa11.98□□□□□ -0.49
NPHP1-208ENST00000449600 FNBP4Q8N3X1 1017 aaPredicted RBP11.98□□□□□ -0.49
NPHP1-208ENST00000449600 ACIN1Q9UKV3 1341 aaKnown RBP11.97□□□□□ -0.49
NPHP1-208ENST00000449600 TSPY4P0CV99 314 aa11.97□□□□□ -0.49
NPHP1-208ENST00000449600 TSPY10P0CW01 314 aa11.97□□□□□ -0.49
NPHP1-208ENST00000449600 THSD4Q6ZMP0 1018 aa11.97□□□□□ -0.49
NPHP1-208ENST00000449600 CHD2O14647 1828 aaKnown RBP11.97□□□□□ -0.49
NPHP1-208ENST00000449600 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.97□□□□□ -0.49
NPHP1-208ENST00000449600 EIF2AK4Q9P2K8 1649 aaKnown RBP11.97□□□□□ -0.49
NPHP1-208ENST00000449600 USP21Q9UK80 565 aa11.96□□□□□ -0.49
NPHP1-208ENST00000449600 ASXL1Q8IXJ9 1541 aa11.96□□□□□ -0.5
NPHP1-208ENST00000449600 DCCP43146 1447 aa11.95□□□□□ -0.5
NPHP1-208ENST00000449600 PTPREP23469 700 aa11.95□□□□□ -0.5
NPHP1-208ENST00000449600 RYDENQ9NUL5 291 aaKnown RBP11.94□□□□□ -0.5
NPHP1-208ENST00000449600 CHIC2Q9UKJ5 165 aa11.94□□□□□ -0.5
NPHP1-208ENST00000449600 IDI1Q13907 227 aa11.93□□□□□ -0.5
NPHP1-208ENST00000449600 DEFB132Q7Z7B7 95 aa11.93□□□□□ -0.5
NPHP1-208ENST00000449600 TBX22Q9Y458 520 aa11.93□□□□□ -0.5
NPHP1-208ENST00000449600 DAPK1P53355 1430 aa11.93□□□□□ -0.5
NPHP1-208ENST00000449600 PLEKHG1Q9ULL1 1385 aa11.92□□□□□ -0.5
NPHP1-208ENST00000449600 C14orf37Q86TY3 774 aa11.92□□□□□ -0.5
NPHP1-208ENST00000449600 ADAM33Q9BZ11 813 aa11.92□□□□□ -0.5
NPHP1-208ENST00000449600 PTCH1Q13635 1447 aa11.92□□□□□ -0.5
NPHP1-208ENST00000449600 EVI5O60447 810 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms