RNA–Protein interactions for RNA: ENST00000449279.5

SEM1-206, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 3

Gene SEM1, Length 699 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-206ENST00000449279 SLC24A1O60721 1099 aa13.7□□□□□ -0.22
SEM1-206ENST00000449279 NGDNQ8NEJ9 315 aaKnown RBP13.7□□□□□ -0.22
SEM1-206ENST00000449279 MED1Q15648 1581 aaPredicted RBP13.7□□□□□ -0.22
SEM1-206ENST00000449279 KTN1Q86UP2 1357 aaKnown RBP13.7□□□□□ -0.22
SEM1-206ENST00000449279 NINLQ9Y2I6 1382 aa13.7□□□□□ -0.22
SEM1-206ENST00000449279 CARD14Q9BXL6 1004 aa13.69□□□□□ -0.22
SEM1-206ENST00000449279 NSD3Q9BZ95 1437 aa13.69□□□□□ -0.22
SEM1-206ENST00000449279 KRT28Q7Z3Y7 464 aa13.68□□□□□ -0.22
SEM1-206ENST00000449279 SOS2Q07890 1332 aaPredicted RBP13.67□□□□□ -0.22
SEM1-206ENST00000449279 NPHP3Q7Z494 1330 aa13.67□□□□□ -0.22
SEM1-206ENST00000449279 TNS3Q68CZ2 1445 aa13.67□□□□□ -0.22
SEM1-206ENST00000449279 EDC4Q6P2E9 1401 aaKnown RBP13.67□□□□□ -0.22
SEM1-206ENST00000449279 HSPA1LP34931 641 aa13.67□□□□□ -0.22
SEM1-206ENST00000449279 PANK3Q9H999 370 aa13.67□□□□□ -0.22
SEM1-206ENST00000449279 PSME1Q06323 249 aa13.66□□□□□ -0.22
SEM1-206ENST00000449279 DDX10Q13206 875 aaKnown RBP13.66□□□□□ -0.22
SEM1-206ENST00000449279 ZRANB1Q9UGI0 708 aa13.66□□□□□ -0.22
SEM1-206ENST00000449279 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.65□□□□□ -0.22
SEM1-206ENST00000449279 FBXO41Q8TF61 875 aa13.65□□□□□ -0.22
SEM1-206ENST00000449279 TERF2IPQ9NYB0 399 aa13.65□□□□□ -0.22
SEM1-206ENST00000449279 TTC21BQ7Z4L5 1316 aa13.64□□□□□ -0.23
SEM1-206ENST00000449279 PLCH1Q4KWH8 1693 aa13.64□□□□□ -0.23
SEM1-206ENST00000449279 SBNO1A3KN83 1393 aa13.64□□□□□ -0.23
SEM1-206ENST00000449279 PLEKHG5O94827 1062 aa13.64□□□□□ -0.23
SEM1-206ENST00000449279 NUTM2GQ5VZR2 741 aa13.64□□□□□ -0.23
SEM1-206ENST00000449279 HDGFL2Q7Z4V5 671 aaPredicted RBP13.64□□□□□ -0.23
SEM1-206ENST00000449279 NME9Q86XW9 330 aa13.64□□□□□ -0.23
SEM1-206ENST00000449279 SLIT3O75094 1523 aa13.64□□□□□ -0.23
SEM1-206ENST00000449279 SPATA31A3Q5VYP0 1347 aa13.64□□□□□ -0.23
SEM1-206ENST00000449279 RGPD2P0DJD1 1756 aa13.63□□□□□ -0.23
SEM1-206ENST00000449279 PNPLA6Q8IY17 1366 aa13.63□□□□□ -0.23
SEM1-206ENST00000449279 PAK3O75914 559 aaPredicted RBP13.63□□□□□ -0.23
SEM1-206ENST00000449279 PEAK1Q9H792 1746 aa13.63□□□□□ -0.23
SEM1-206ENST00000449279 NFAT5O94916 1531 aa13.62□□□□□ -0.23
SEM1-206ENST00000449279 COL18A1P39060 1754 aa13.62□□□□□ -0.23
SEM1-206ENST00000449279 OVOS2A0A0J9YW53 1432 aa13.62□□□□□ -0.23
SEM1-206ENST00000449279 OVOS2Q6IE36 1432 aa13.62□□□□□ -0.23
SEM1-206ENST00000449279 PER1O15534 1290 aaPredicted RBP13.61□□□□□ -0.23
SEM1-206ENST00000449279 LRP6O75581 1613 aa13.61□□□□□ -0.23
SEM1-206ENST00000449279 LMOD2Q6P5Q4 547 aa13.6□□□□□ -0.23
SEM1-206ENST00000449279 ZNF692Q9BU19 519 aaPredicted RBP13.6□□□□□ -0.23
SEM1-206ENST00000449279 CNGB1Q14028 1251 aaPredicted RBP13.59□□□□□ -0.23
SEM1-206ENST00000449279 CABLES1Q8TDN4 633 aa13.59□□□□□ -0.23
SEM1-206ENST00000449279 TTC21AQ8NDW8 1320 aa13.59□□□□□ -0.23
SEM1-206ENST00000449279 NRAPQ86VF7 1730 aa13.59□□□□□ -0.23
SEM1-206ENST00000449279 BRD4O60885 1362 aaPredicted RBP13.58□□□□□ -0.23
SEM1-206ENST00000449279 FYB1O15117 783 aa13.58□□□□□ -0.24
SEM1-206ENST00000449279 AMER1Q5JTC6 1135 aaPredicted RBP13.58□□□□□ -0.24
SEM1-206ENST00000449279 ABTB2Q8N961 1025 aa13.58□□□□□ -0.24
SEM1-206ENST00000449279 GGNBP2Q9H3C7 697 aa13.58□□□□□ -0.24
SEM1-206ENST00000449279 LMO7Q8WWI1 1683 aa13.57□□□□□ -0.24
SEM1-206ENST00000449279 USP19O94966 1318 aa13.57□□□□□ -0.24
SEM1-206ENST00000449279 ARHGEF10O15013 1369 aa13.57□□□□□ -0.24
SEM1-206ENST00000449279 USP31Q70CQ4 1352 aa13.57□□□□□ -0.24
SEM1-206ENST00000449279 COL14A1Q05707 1796 aaKnown RBP13.56□□□□□ -0.24
SEM1-206ENST00000449279 FBLN1P23142 703 aa13.56□□□□□ -0.24
SEM1-206ENST00000449279 ILDR1Q86SU0 546 aaPredicted RBP13.56□□□□□ -0.24
SEM1-206ENST00000449279 LRRC59Q96AG4 307 aaKnown RBP13.56□□□□□ -0.24
SEM1-206ENST00000449279 JCADQ9P266 1359 aa13.56□□□□□ -0.24
SEM1-206ENST00000449279 SOX12O15370 315 aa13.55□□□□□ -0.24
SEM1-206ENST00000449279 NLRP6P59044 892 aa13.55□□□□□ -0.24
SEM1-206ENST00000449279 CC2D1BQ5T0F9 858 aaKnown RBP13.55□□□□□ -0.24
SEM1-206ENST00000449279 KNSTRNQ9Y448 316 aa13.55□□□□□ -0.24
SEM1-206ENST00000449279 NWD2Q9ULI1 1742 aa13.54□□□□□ -0.24
SEM1-206ENST00000449279 CGNL1Q0VF96 1302 aa13.54□□□□□ -0.24
SEM1-206ENST00000449279 WNK3Q9BYP7 1800 aa13.53□□□□□ -0.24
SEM1-206ENST00000449279 NUTM2BA6NNL0 878 aaPredicted RBP13.52□□□□□ -0.25
SEM1-206ENST00000449279 NUTM2EB1AL46 878 aaPredicted RBP13.52□□□□□ -0.25
SEM1-206ENST00000449279 NUTM2AQ8IVF1 878 aaPredicted RBP13.52□□□□□ -0.25
SEM1-206ENST00000449279 NSD2O96028 1365 aa13.52□□□□□ -0.25
SEM1-206ENST00000449279 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.52□□□□□ -0.25
SEM1-206ENST00000449279 NPC1L1Q9UHC9 1359 aa13.51□□□□□ -0.25
SEM1-206ENST00000449279 TNNT2P45379 298 aaPredicted RBP13.51□□□□□ -0.25
SEM1-206ENST00000449279 NLRP13Q86W25 1043 aa13.51□□□□□ -0.25
SEM1-206ENST00000449279 COG3Q96JB2 828 aa13.5□□□□□ -0.25
SEM1-206ENST00000449279 CAMTA1Q9Y6Y1 1673 aa13.5□□□□□ -0.25
SEM1-206ENST00000449279 PARD3Q8TEW0 1356 aa13.49□□□□□ -0.25
SEM1-206ENST00000449279 KIAA0232Q92628 1395 aa13.49□□□□□ -0.25
SEM1-206ENST00000449279 ZC3H6P61129 1189 aaKnown RBP13.49□□□□□ -0.25
SEM1-206ENST00000449279 FAM208AQ9UK61 1670 aaKnown RBP13.49□□□□□ -0.25
SEM1-206ENST00000449279 RGPD1P0DJD0 1748 aa13.48□□□□□ -0.25
SEM1-206ENST00000449279 ZBTB7CA1YPR0 619 aa13.48□□□□□ -0.25
SEM1-206ENST00000449279 ADAMTS2O95450 1211 aa13.48□□□□□ -0.25
SEM1-206ENST00000449279 GCP02774 474 aa13.48□□□□□ -0.25
SEM1-206ENST00000449279 MORC1Q86VD1 984 aa13.48□□□□□ -0.25
SEM1-206ENST00000449279 RRS1Q15050 365 aaKnown RBP13.47□□□□□ -0.25
SEM1-206ENST00000449279 CHRNA2Q15822 529 aa13.47□□□□□ -0.25
SEM1-206ENST00000449279 SMG6Q86US8 1419 aaKnown RBP13.47□□□□□ -0.25
SEM1-206ENST00000449279 MAP3K19Q56UN5 1328 aa13.46□□□□□ -0.25
SEM1-206ENST00000449279 SPATA31A6Q5VVP1 1343 aa13.46□□□□□ -0.25
SEM1-206ENST00000449279 HAP1P54257 671 aaPredicted RBP13.46□□□□□ -0.25
SEM1-206ENST00000449279 EMILIN1Q9Y6C2 1016 aa13.46□□□□□ -0.25
SEM1-206ENST00000449279 COL3A1P02461 1466 aaPredicted RBP13.46□□□□□ -0.25
SEM1-206ENST00000449279 VIRMAQ69YN4 1812 aaKnown RBP13.46□□□□□ -0.26
SEM1-206ENST00000449279 CPDO75976 1380 aa13.45□□□□□ -0.26
SEM1-206ENST00000449279 ABCC6O95255 1503 aa13.45□□□□□ -0.26
SEM1-206ENST00000449279 AATKQ6ZMQ8 1374 aa13.45□□□□□ -0.26
SEM1-206ENST00000449279 CDK12Q9NYV4 1490 aaPredicted RBP13.44□□□□□ -0.26
SEM1-206ENST00000449279 ARHGEF25Q86VW2 580 aa13.44□□□□□ -0.26
SEM1-206ENST00000449279 SLIT2O94813 1529 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms