RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 SART3Q15020 963 aaKnown RBP12.31□□□□□ -0.44
SCN10A-201ENST00000449082 HIP1O00291 1037 aa12.31□□□□□ -0.44
SCN10A-201ENST00000449082 NBPF1Q3BBV0 1214 aa12.31□□□□□ -0.44
SCN10A-201ENST00000449082 SLC3A2P08195 630 aaKnown RBP12.31□□□□□ -0.44
SCN10A-201ENST00000449082 SULT6B1Q6IMI4 303 aa12.3□□□□□ -0.44
SCN10A-201ENST00000449082 GNL3LQ9NVN8 582 aaKnown RBP12.3□□□□□ -0.44
SCN10A-201ENST00000449082 SLC12A5Q9H2X9 1139 aa12.3□□□□□ -0.44
SCN10A-201ENST00000449082 ERBINQ96RT1 1412 aa12.3□□□□□ -0.44
SCN10A-201ENST00000449082 CCDC73Q6ZRK6 1079 aa12.3□□□□□ -0.44
SCN10A-201ENST00000449082 CNNM1Q9NRU3 951 aa12.3□□□□□ -0.44
SCN10A-201ENST00000449082 EXOSC9Q06265 439 aaKnown RBP12.3□□□□□ -0.44
SCN10A-201ENST00000449082 ZNF530Q6P9A1 599 aaPredicted RBP12.3□□□□□ -0.44
SCN10A-201ENST00000449082 DDX54Q8TDD1 881 aaKnown RBP12.3□□□□□ -0.44
SCN10A-201ENST00000449082 ARID3AQ99856 593 aa12.3□□□□□ -0.44
SCN10A-201ENST00000449082 C22orf23Q9BZE7 217 aa12.3□□□□□ -0.44
SCN10A-201ENST00000449082 ANO8Q9HCE9 1232 aaPredicted RBP12.29□□□□□ -0.44
SCN10A-201ENST00000449082 TOP2BQ02880 1626 aa12.29□□□□□ -0.44
SCN10A-201ENST00000449082 IKQ13123 557 aaPredicted RBP12.29□□□□□ -0.44
SCN10A-201ENST00000449082 HDGFL1Q5TGJ6 251 aa12.29□□□□□ -0.44
SCN10A-201ENST00000449082 GNAI2P04899 355 aa12.29□□□□□ -0.44
SCN10A-201ENST00000449082 FOSBP53539 338 aa12.29□□□□□ -0.44
SCN10A-201ENST00000449082 DNAJC2Q99543 621 aaKnown RBP12.29□□□□□ -0.44
SCN10A-201ENST00000449082 DNMBPQ6XZF7 1577 aa12.29□□□□□ -0.44
SCN10A-201ENST00000449082 SASS6Q6UVJ0 657 aa12.29□□□□□ -0.44
SCN10A-201ENST00000449082 CCAR2Q8N163 923 aaKnown RBP12.29□□□□□ -0.44
SCN10A-201ENST00000449082 SLC26A8Q96RN1 970 aa12.29□□□□□ -0.44
SCN10A-201ENST00000449082 CCDC158Q5M9N0 1113 aa12.29□□□□□ -0.44
SCN10A-201ENST00000449082 ANKRD30BQ9BXX2 1392 aa12.28□□□□□ -0.44
SCN10A-201ENST00000449082 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.28□□□□□ -0.44
SCN10A-201ENST00000449082 TTC39AQ5SRH9 613 aa12.28□□□□□ -0.44
SCN10A-201ENST00000449082 PRDM11Q9NQV5 511 aa12.28□□□□□ -0.44
SCN10A-201ENST00000449082 ATAD2Q6PL18 1390 aa12.28□□□□□ -0.44
SCN10A-201ENST00000449082 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.28□□□□□ -0.44
SCN10A-201ENST00000449082 SUPT6HQ7KZ85 1726 aaKnown RBP12.28□□□□□ -0.44
SCN10A-201ENST00000449082 CNKSR2Q8WXI2 1034 aa12.27□□□□□ -0.44
SCN10A-201ENST00000449082 SLC4A2P04920 1241 aa12.27□□□□□ -0.45
SCN10A-201ENST00000449082 CCT4P50991 539 aaKnown RBP12.27□□□□□ -0.45
SCN10A-201ENST00000449082 MTMR7Q9Y216 660 aa12.26□□□□□ -0.45
SCN10A-201ENST00000449082 DAPK1P53355 1430 aa12.26□□□□□ -0.45
SCN10A-201ENST00000449082 HMGB2P26583 209 aaKnown RBP12.26□□□□□ -0.45
SCN10A-201ENST00000449082 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.26□□□□□ -0.45
SCN10A-201ENST00000449082 R3HCC1Q9Y3T6 440 aaKnown RBP12.26□□□□□ -0.45
SCN10A-201ENST00000449082 GCC1Q96CN9 775 aa12.26□□□□□ -0.45
SCN10A-201ENST00000449082 KIAA0586Q9BVV6 1533 aa12.25□□□□□ -0.45
SCN10A-201ENST00000449082 PRXQ9BXM0 1461 aa12.25□□□□□ -0.45
SCN10A-201ENST00000449082 PPP1R1BQ9UD71 204 aaPredicted RBP12.25□□□□□ -0.45
SCN10A-201ENST00000449082 NOB1Q9ULX3 412 aaKnown RBP12.24□□□□□ -0.45
SCN10A-201ENST00000449082 CT47B1P0C2W7 299 aaPredicted RBP12.24□□□□□ -0.45
SCN10A-201ENST00000449082 PIP4K2BP78356 416 aa12.24□□□□□ -0.45
SCN10A-201ENST00000449082 GSE1Q14687 1217 aa12.24□□□□□ -0.45
SCN10A-201ENST00000449082 SRCIN1Q9C0H9 1055 aa12.24□□□□□ -0.45
SCN10A-201ENST00000449082 GPS2Q13227 327 aa12.24□□□□□ -0.45
SCN10A-201ENST00000449082 OLFM4Q6UX06 510 aa12.24□□□□□ -0.45
SCN10A-201ENST00000449082 WDR63Q8IWG1 891 aa12.23□□□□□ -0.45
SCN10A-201ENST00000449082 CCAR1Q8IX12 1150 aaKnown RBP12.23□□□□□ -0.45
SCN10A-201ENST00000449082 PDE3AQ14432 1141 aa12.23□□□□□ -0.45
SCN10A-201ENST00000449082 KCNH5Q8NCM2 988 aa12.23□□□□□ -0.45
SCN10A-201ENST00000449082 MPHOSPH8Q99549 860 aa12.22□□□□□ -0.45
SCN10A-201ENST00000449082 TIAM1Q13009 1591 aa12.22□□□□□ -0.45
SCN10A-201ENST00000449082 RRP12Q5JTH9 1297 aaKnown RBP12.22□□□□□ -0.45
SCN10A-201ENST00000449082 TSR2Q969E8 191 aaKnown RBP12.22□□□□□ -0.45
SCN10A-201ENST00000449082 CDCA7LQ96GN5 454 aa12.22□□□□□ -0.45
SCN10A-201ENST00000449082 NAT10Q9H0A0 1025 aaKnown RBP12.22□□□□□ -0.45
SCN10A-201ENST00000449082 MYL6BP14649 208 aa12.22□□□□□ -0.45
SCN10A-201ENST00000449082 CCDC57Q2TAC2 916 aa12.22□□□□□ -0.45
SCN10A-201ENST00000449082 ZNF592Q92610 1267 aa12.22□□□□□ -0.45
SCN10A-201ENST00000449082 BTBD11A6QL63 1104 aa12.22□□□□□ -0.45
SCN10A-201ENST00000449082 EPS15P42566 896 aa12.22□□□□□ -0.45
SCN10A-201ENST00000449082 HOMER1Q86YM7 354 aa12.22□□□□□ -0.45
SCN10A-201ENST00000449082 MCM2P49736 904 aa12.22□□□□□ -0.45
SCN10A-201ENST00000449082 NACAP1Q9BZK3 213 aa12.22□□□□□ -0.45
SCN10A-201ENST00000449082 EPRSP07814 1512 aaKnown RBP12.21□□□□□ -0.45
SCN10A-201ENST00000449082 NUDT16Q96DE0 195 aaKnown RBP12.21□□□□□ -0.45
SCN10A-201ENST00000449082 CD109Q6YHK3 1445 aa12.21□□□□□ -0.45
SCN10A-201ENST00000449082 CT47A1Q5JQC4 288 aaPredicted RBP12.21□□□□□ -0.46
SCN10A-201ENST00000449082 ZSCAN25Q6NSZ9 544 aa12.21□□□□□ -0.46
SCN10A-201ENST00000449082 C1orf115Q9H7X2 142 aa12.21□□□□□ -0.46
SCN10A-201ENST00000449082 LRRCC1Q9C099 1032 aa12.21□□□□□ -0.46
SCN10A-201ENST00000449082 CCDC61Q9Y6R9 512 aa12.21□□□□□ -0.46
SCN10A-201ENST00000449082 RRS1Q15050 365 aaKnown RBP12.2□□□□□ -0.46
SCN10A-201ENST00000449082 PDCP20941 246 aa12.2□□□□□ -0.46
SCN10A-201ENST00000449082 NBPF8Q3BBV2 869 aa12.2□□□□□ -0.46
SCN10A-201ENST00000449082 SDF4Q9BRK5 362 aa12.2□□□□□ -0.46
SCN10A-201ENST00000449082 KRI1Q8N9T8 703 aaKnown RBP12.2□□□□□ -0.46
SCN10A-201ENST00000449082 CCDC141Q6ZP82 1450 aa12.2□□□□□ -0.46
SCN10A-201ENST00000449082 FCHSD2O94868 740 aa12.2□□□□□ -0.46
SCN10A-201ENST00000449082 TNNT3P45378 269 aaPredicted RBP12.2□□□□□ -0.46
SCN10A-201ENST00000449082 CDK5RAP3Q96JB5 506 aa12.2□□□□□ -0.46
SCN10A-201ENST00000449082 PDZRN3Q9UPQ7 1066 aa12.2□□□□□ -0.46
SCN10A-201ENST00000449082 IQGAP2Q13576 1575 aa12.2□□□□□ -0.46
SCN10A-201ENST00000449082 ODF2Q5BJF6 829 aa12.19□□□□□ -0.46
SCN10A-201ENST00000449082 KDM4AO75164 1064 aa12.19□□□□□ -0.46
SCN10A-201ENST00000449082 NAP1L1P55209 391 aaKnown RBP12.19□□□□□ -0.46
SCN10A-201ENST00000449082 XPCQ01831 940 aaPredicted RBP12.19□□□□□ -0.46
SCN10A-201ENST00000449082 SIL1Q9H173 461 aa12.19□□□□□ -0.46
SCN10A-201ENST00000449082 TXLNAP40222 546 aa12.19□□□□□ -0.46
SCN10A-201ENST00000449082 ZC3H6P61129 1189 aaKnown RBP12.18□□□□□ -0.46
SCN10A-201ENST00000449082 MAGI1Q96QZ7 1491 aaPredicted RBP12.18□□□□□ -0.46
SCN10A-201ENST00000449082 CDK13Q14004 1512 aaKnown RBP12.18□□□□□ -0.46
SCN10A-201ENST00000449082 OFD1O75665 1012 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 1046.6 ms