RNA–Protein interactions for RNA: ENST00000448704.5

COA1-212, Transcript of cytochrome c oxidase assembly factor 1 homolog, humanhuman

TSL 1 (best)

Gene COA1, Length 1,599 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COA1-212ENST00000448704 SSH2Q76I76 1423 aa24■■□□□ 1.43
COA1-212ENST00000448704 SHPRHQ149N8 1683 aa23.99■■□□□ 1.43
COA1-212ENST00000448704 PROSER2Q86WR7 435 aaPredicted RBP23.99■■□□□ 1.43
COA1-212ENST00000448704 ZRANB1Q9UGI0 708 aa23.99■■□□□ 1.43
COA1-212ENST00000448704 NGDNQ8NEJ9 315 aaKnown RBP23.98■■□□□ 1.43
COA1-212ENST00000448704 COG3Q96JB2 828 aa23.97■■□□□ 1.43
COA1-212ENST00000448704 C14orf37Q86TY3 774 aa23.96■■□□□ 1.43
COA1-212ENST00000448704 TTC21AQ8NDW8 1320 aa23.95■■□□□ 1.42
COA1-212ENST00000448704 COL3A1P02461 1466 aaPredicted RBP23.94■■□□□ 1.42
COA1-212ENST00000448704 AATKQ6ZMQ8 1374 aa23.94■■□□□ 1.42
COA1-212ENST00000448704 SMG6Q86US8 1419 aaKnown RBP23.93■■□□□ 1.42
COA1-212ENST00000448704 PNPLA6Q8IY17 1366 aa23.93■■□□□ 1.42
COA1-212ENST00000448704 POLKQ9UBT6 870 aa23.93■■□□□ 1.42
COA1-212ENST00000448704 SALL2Q9Y467 1007 aaPredicted RBP23.93■■□□□ 1.42
COA1-212ENST00000448704 STRCQ7RTU9 1775 aa23.93■■□□□ 1.42
COA1-212ENST00000448704 PHF8Q9UPP1 1060 aa23.92■■□□□ 1.42
COA1-212ENST00000448704 STRCP1A6NGW2 1772 aa23.92■■□□□ 1.42
COA1-212ENST00000448704 CCDC146Q8IYE0 955 aa23.91■■□□□ 1.42
COA1-212ENST00000448704 OVOS2A0A0J9YW53 1432 aa23.91■■□□□ 1.42
COA1-212ENST00000448704 OVOS2Q6IE36 1432 aa23.91■■□□□ 1.42
COA1-212ENST00000448704 FBLN1P23142 703 aa23.91■■□□□ 1.42
COA1-212ENST00000448704 PDE3BQ13370 1112 aa23.9■■□□□ 1.42
COA1-212ENST00000448704 NUDCQ9Y266 331 aa23.9■■□□□ 1.42
COA1-212ENST00000448704 NCOA3Q9Y6Q9 1424 aa23.9■■□□□ 1.42
COA1-212ENST00000448704 C19orf44Q9H6X5 657 aa23.89■■□□□ 1.41
COA1-212ENST00000448704 TMEM94Q12767 1356 aa23.88■■□□□ 1.41
COA1-212ENST00000448704 USP31Q70CQ4 1352 aa23.87■■□□□ 1.41
COA1-212ENST00000448704 APAF1O14727 1248 aa23.86■■□□□ 1.41
COA1-212ENST00000448704 DIAPH1O60610 1272 aaKnown RBP23.86■■□□□ 1.41
COA1-212ENST00000448704 ESCO1Q5FWF5 840 aa23.86■■□□□ 1.41
COA1-212ENST00000448704 EMILIN1Q9Y6C2 1016 aa23.86■■□□□ 1.41
COA1-212ENST00000448704 MAP2P11137 1827 aaKnown RBP23.86■■□□□ 1.41
COA1-212ENST00000448704 U2AF1L5P0DN76 240 aaPredicted RBP23.84■■□□□ 1.41
COA1-212ENST00000448704 U2AF1Q01081 240 aaKnown RBP eCLIP23.84■■□□□ 1.41
COA1-212ENST00000448704 RUNDC1Q96C34 613 aa23.84■■□□□ 1.41
COA1-212ENST00000448704 CDK12Q9NYV4 1490 aaPredicted RBP23.83■■□□□ 1.41
COA1-212ENST00000448704 PPM1GO15355 546 aaPredicted RBP23.83■■□□□ 1.41
COA1-212ENST00000448704 RRS1Q15050 365 aaKnown RBP23.82■■□□□ 1.4
COA1-212ENST00000448704 NGEFQ8N5V2 710 aa23.82■■□□□ 1.4
COA1-212ENST00000448704 SUPT16HQ9Y5B9 1047 aaKnown RBP23.82■■□□□ 1.4
COA1-212ENST00000448704 ZNF521Q96K83 1311 aa23.82■■□□□ 1.4
COA1-212ENST00000448704 PIK3C2AO00443 1686 aa23.82■■□□□ 1.4
COA1-212ENST00000448704 DCCP43146 1447 aa23.82■■□□□ 1.4
COA1-212ENST00000448704 U2SURPO15042 1029 aaKnown RBP23.81■■□□□ 1.4
COA1-212ENST00000448704 ORAI2Q96SN7 254 aa23.81■■□□□ 1.4
COA1-212ENST00000448704 C1orf167Q5SNV9 1468 aa23.81■■□□□ 1.4
COA1-212ENST00000448704 CDCA7LQ96GN5 454 aa23.79■■□□□ 1.4
COA1-212ENST00000448704 IQSEC2Q5JU85 1478 aa23.78■■□□□ 1.4
COA1-212ENST00000448704 ATF3P18847 181 aa23.78■■□□□ 1.4
COA1-212ENST00000448704 PSME1Q06323 249 aa23.78■■□□□ 1.4
COA1-212ENST00000448704 IL13P35225 146 aa23.77■■□□□ 1.4
COA1-212ENST00000448704 NLRP6P59044 892 aa23.77■■□□□ 1.4
COA1-212ENST00000448704 USP54Q70EL1 1684 aa23.77■■□□□ 1.4
COA1-212ENST00000448704 MST1RQ04912 1400 aa23.76■■□□□ 1.39
COA1-212ENST00000448704 PAK3O75914 559 aaPredicted RBP23.76■■□□□ 1.39
COA1-212ENST00000448704 NEFLP07196 543 aa23.76■■□□□ 1.39
COA1-212ENST00000448704 TCP11L2Q8N4U5 519 aa23.76■■□□□ 1.39
COA1-212ENST00000448704 ABTB2Q8N961 1025 aa23.76■■□□□ 1.39
COA1-212ENST00000448704 PLEKHF1Q96S99 279 aa23.76■■□□□ 1.39
COA1-212ENST00000448704 ZNF335Q9H4Z2 1342 aaPredicted RBP23.74■■□□□ 1.39
COA1-212ENST00000448704 LRRC7Q96NW7 1537 aa23.74■■□□□ 1.39
COA1-212ENST00000448704 KIF1AQ12756 1690 aa23.74■■□□□ 1.39
COA1-212ENST00000448704 GOLGA2Q08379 1002 aa23.74■■□□□ 1.39
COA1-212ENST00000448704 NCBP3Q53F19 620 aaKnown RBP23.74■■□□□ 1.39
COA1-212ENST00000448704 CADPS2Q86UW7 1296 aa23.74■■□□□ 1.39
COA1-212ENST00000448704 MARF1Q9Y4F3 1742 aaKnown RBP23.73■■□□□ 1.39
COA1-212ENST00000448704 MSH6P52701 1360 aa23.73■■□□□ 1.39
COA1-212ENST00000448704 FOXO3O43524 673 aa23.73■■□□□ 1.39
COA1-212ENST00000448704 FKBP8Q14318 412 aa23.73■■□□□ 1.39
COA1-212ENST00000448704 PNNQ9H307 717 aaKnown RBP23.73■■□□□ 1.39
COA1-212ENST00000448704 FCHSD2O94868 740 aa23.72■■□□□ 1.39
COA1-212ENST00000448704 NUTM2GQ5VZR2 741 aa23.72■■□□□ 1.39
COA1-212ENST00000448704 XIRP1Q702N8 1843 aaKnown RBP23.71■■□□□ 1.39
COA1-212ENST00000448704 SOX12O15370 315 aa23.71■■□□□ 1.39
COA1-212ENST00000448704 DMRT2Q9Y5R5 561 aa23.71■■□□□ 1.39
COA1-212ENST00000448704 PEAK1Q9H792 1746 aa23.71■■□□□ 1.39
COA1-212ENST00000448704 MAP3K19Q56UN5 1328 aa23.7■■□□□ 1.39
COA1-212ENST00000448704 PHF23Q9BUL5 403 aaPredicted RBP23.7■■□□□ 1.38
COA1-212ENST00000448704 WWC1Q8IX03 1113 aa23.69■■□□□ 1.38
COA1-212ENST00000448704 RRP7AQ9Y3A4 280 aaKnown RBP23.69■■□□□ 1.38
COA1-212ENST00000448704 SLFN5Q08AF3 891 aa23.69■■□□□ 1.38
COA1-212ENST00000448704 CCDC27Q2M243 656 aa23.69■■□□□ 1.38
COA1-212ENST00000448704 RSPH6AQ9H0K4 717 aa23.69■■□□□ 1.38
COA1-212ENST00000448704 SBNO1A3KN83 1393 aa23.68■■□□□ 1.38
COA1-212ENST00000448704 KRT28Q7Z3Y7 464 aa23.68■■□□□ 1.38
COA1-212ENST00000448704 MAPK8IP3Q9UPT6 1336 aa23.67■■□□□ 1.38
COA1-212ENST00000448704 EIF4A2Q14240 407 aaKnown RBP23.67■■□□□ 1.38
COA1-212ENST00000448704 NEUROD2Q15784 382 aa23.67■■□□□ 1.38
COA1-212ENST00000448704 DUSP27Q5VZP5 1158 aa23.67■■□□□ 1.38
COA1-212ENST00000448704 TRMT2AQ8IZ69 625 aaKnown RBP23.67■■□□□ 1.38
COA1-212ENST00000448704 RNF123Q5XPI4 1314 aa23.67■■□□□ 1.38
COA1-212ENST00000448704 XPCQ01831 940 aaPredicted RBP23.66■■□□□ 1.38
COA1-212ENST00000448704 HSP90AB2PQ58FF8 381 aa23.66■■□□□ 1.38
COA1-212ENST00000448704 FLT4P35916 1363 aa23.66■■□□□ 1.38
COA1-212ENST00000448704 TRPM3Q9HCF6 1732 aaPredicted RBP23.65■■□□□ 1.38
COA1-212ENST00000448704 PRKAR2BP31323 418 aa23.65■■□□□ 1.38
COA1-212ENST00000448704 TMPOP42166 694 aaKnown RBP23.65■■□□□ 1.38
COA1-212ENST00000448704 KIF24Q5T7B8 1368 aa23.65■■□□□ 1.38
COA1-212ENST00000448704 E9PSI1 815 aa23.64■■□□□ 1.37
COA1-212ENST00000448704 HMOX1P09601 288 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms