RNA–Protein interactions for RNA: ENST00000447782.1

CCDC138-204, Transcript of coiled-coil domain containing 138, humanhuman

TSL 3

Gene CCDC138, Length 539 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138-204ENST00000447782 TNS3Q68CZ2 1445 aa17.45■□□□□ 0.38
CCDC138-204ENST00000447782 SBNO1A3KN83 1393 aa17.44■□□□□ 0.38
CCDC138-204ENST00000447782 USP32Q8NFA0 1604 aa17.44■□□□□ 0.38
CCDC138-204ENST00000447782 VPS72Q15906 364 aa17.44■□□□□ 0.38
CCDC138-204ENST00000447782 KRT28Q7Z3Y7 464 aa17.44■□□□□ 0.38
CCDC138-204ENST00000447782 NUDT16Q96DE0 195 aaKnown RBP17.44■□□□□ 0.38
CCDC138-204ENST00000447782 PSME1Q06323 249 aa17.43■□□□□ 0.38
CCDC138-204ENST00000447782 EVC2Q86UK5 1308 aa17.42■□□□□ 0.38
CCDC138-204ENST00000447782 ARHGEF10O15013 1369 aa17.41■□□□□ 0.38
CCDC138-204ENST00000447782 ATP7BP35670 1465 aa17.41■□□□□ 0.38
CCDC138-204ENST00000447782 USP47Q96K76 1375 aa17.4■□□□□ 0.38
CCDC138-204ENST00000447782 ST20-MTHFSA0A0A6YYL1 179 aa17.4■□□□□ 0.38
CCDC138-204ENST00000447782 NGDNQ8NEJ9 315 aaKnown RBP17.4■□□□□ 0.38
CCDC138-204ENST00000447782 SEPT12Q8IYM1 358 aa17.39■□□□□ 0.37
CCDC138-204ENST00000447782 PLEKHG5O94827 1062 aa17.38■□□□□ 0.37
CCDC138-204ENST00000447782 LMOD2Q6P5Q4 547 aa17.38■□□□□ 0.37
CCDC138-204ENST00000447782 CCDC61Q9Y6R9 512 aa17.38■□□□□ 0.37
CCDC138-204ENST00000447782 NWD2Q9ULI1 1742 aa17.38■□□□□ 0.37
CCDC138-204ENST00000447782 ITSN1Q15811 1721 aa17.37■□□□□ 0.37
CCDC138-204ENST00000447782 PPIP5K1Q6PFW1 1433 aa17.37■□□□□ 0.37
CCDC138-204ENST00000447782 PAK3O75914 559 aaPredicted RBP17.35■□□□□ 0.37
CCDC138-204ENST00000447782 SF3B2Q13435 895 aaKnown RBP17.35■□□□□ 0.37
CCDC138-204ENST00000447782 KRT27Q7Z3Y8 459 aa17.35■□□□□ 0.37
CCDC138-204ENST00000447782 SBNO2Q9Y2G9 1366 aa17.35■□□□□ 0.37
CCDC138-204ENST00000447782 HAP1P54257 671 aaPredicted RBP17.34■□□□□ 0.37
CCDC138-204ENST00000447782 TOPAZ1Q8N9V7 1692 aa17.34■□□□□ 0.37
CCDC138-204ENST00000447782 CABP1Q9NZU7 370 aa17.34■□□□□ 0.37
CCDC138-204ENST00000447782 ACEP12821 1306 aa17.33■□□□□ 0.36
CCDC138-204ENST00000447782 FAM83GA6ND36 823 aa17.33■□□□□ 0.36
CCDC138-204ENST00000447782 DEFB132Q7Z7B7 95 aa17.33■□□□□ 0.36
CCDC138-204ENST00000447782 CABLES1Q8TDN4 633 aa17.33■□□□□ 0.36
CCDC138-204ENST00000447782 LRP5O75197 1615 aa17.32■□□□□ 0.36
CCDC138-204ENST00000447782 TESK2Q96S53 571 aa17.32■□□□□ 0.36
CCDC138-204ENST00000447782 BRWD3Q6RI45 1802 aa17.32■□□□□ 0.36
CCDC138-204ENST00000447782 PLCH1Q4KWH8 1693 aa17.32■□□□□ 0.36
CCDC138-204ENST00000447782 ABCA3Q99758 1704 aa17.31■□□□□ 0.36
CCDC138-204ENST00000447782 PLEKHG3A1L390 1219 aa17.31■□□□□ 0.36
CCDC138-204ENST00000447782 MAPK8IP2Q13387 824 aaPredicted RBP17.31■□□□□ 0.36
CCDC138-204ENST00000447782 TMC1Q8TDI8 760 aa17.31■□□□□ 0.36
CCDC138-204ENST00000447782 TMF1P82094 1093 aa17.29■□□□□ 0.36
CCDC138-204ENST00000447782 POLR3AO14802 1390 aaPredicted RBP17.28■□□□□ 0.36
CCDC138-204ENST00000447782 BAG6P46379 1132 aa17.28■□□□□ 0.36
CCDC138-204ENST00000447782 EIF4G2P78344 907 aaKnown RBP eCLIP17.28■□□□□ 0.36
CCDC138-204ENST00000447782 DISP2A7MBM2 1401 aa17.28■□□□□ 0.36
CCDC138-204ENST00000447782 HSPA5P11021 654 aaKnown RBP17.27■□□□□ 0.36
CCDC138-204ENST00000447782 CCDC9Q9Y3X0 531 aaKnown RBP17.27■□□□□ 0.36
CCDC138-204ENST00000447782 TRPM3Q9HCF6 1732 aaPredicted RBP17.27■□□□□ 0.35
CCDC138-204ENST00000447782 SLC24A1O60721 1099 aa17.26■□□□□ 0.35
CCDC138-204ENST00000447782 NUTM2GQ5VZR2 741 aa17.26■□□□□ 0.35
CCDC138-204ENST00000447782 POLR3GLQ9BT43 218 aa17.26■□□□□ 0.35
CCDC138-204ENST00000447782 NRAPQ86VF7 1730 aa17.26■□□□□ 0.35
CCDC138-204ENST00000447782 SPATA31A5Q5VU36 1347 aa17.25■□□□□ 0.35
CCDC138-204ENST00000447782 SPATA31A7Q8IWB4 1347 aa17.25■□□□□ 0.35
CCDC138-204ENST00000447782 BTG4Q9NY30 223 aa17.25■□□□□ 0.35
CCDC138-204ENST00000447782 ALS2Q96Q42 1657 aa17.25■□□□□ 0.35
CCDC138-204ENST00000447782 FAM98CQ17RN3 349 aaKnown RBP17.24■□□□□ 0.35
CCDC138-204ENST00000447782 SLC12A5Q9H2X9 1139 aa17.24■□□□□ 0.35
CCDC138-204ENST00000447782 COL14A1Q05707 1796 aaKnown RBP17.24■□□□□ 0.35
CCDC138-204ENST00000447782 USP6P35125 1406 aa17.23■□□□□ 0.35
CCDC138-204ENST00000447782 ABTB2Q8N961 1025 aa17.23■□□□□ 0.35
CCDC138-204ENST00000447782 HDGFL2Q7Z4V5 671 aaPredicted RBP17.22■□□□□ 0.35
CCDC138-204ENST00000447782 KTN1Q86UP2 1357 aaKnown RBP17.22■□□□□ 0.35
CCDC138-204ENST00000447782 THSD7AQ9UPZ6 1657 aa17.21■□□□□ 0.35
CCDC138-204ENST00000447782 CDCA8Q53HL2 280 aa17.21■□□□□ 0.35
CCDC138-204ENST00000447782 PUS7Q96PZ0 661 aaKnown RBP17.2■□□□□ 0.34
CCDC138-204ENST00000447782 ZNF692Q9BU19 519 aaPredicted RBP17.2■□□□□ 0.34
CCDC138-204ENST00000447782 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.19■□□□□ 0.34
CCDC138-204ENST00000447782 TERF2IPQ9NYB0 399 aa17.19■□□□□ 0.34
CCDC138-204ENST00000447782 A0A0G2JS52 829 aa17.18■□□□□ 0.34
CCDC138-204ENST00000447782 MYT1Q01538 1121 aa17.18■□□□□ 0.34
CCDC138-204ENST00000447782 CPSF1Q10570 1443 aaKnown RBP17.18■□□□□ 0.34
CCDC138-204ENST00000447782 RGPD1P0DJD0 1748 aa17.18■□□□□ 0.34
CCDC138-204ENST00000447782 CRYBG1Q9Y4K1 1723 aa17.18■□□□□ 0.34
CCDC138-204ENST00000447782 AKAP12Q02952 1782 aa17.17■□□□□ 0.34
CCDC138-204ENST00000447782 A0A1W2PP64 1363 aa17.17■□□□□ 0.34
CCDC138-204ENST00000447782 PARD3Q8TEW0 1356 aa17.17■□□□□ 0.34
CCDC138-204ENST00000447782 NLRP6P59044 892 aa17.17■□□□□ 0.34
CCDC138-204ENST00000447782 PRDM11Q9NQV5 511 aa17.17■□□□□ 0.34
CCDC138-204ENST00000447782 CD163L1Q9NR16 1453 aa17.17■□□□□ 0.34
CCDC138-204ENST00000447782 SPATA31A1Q5TZJ5 1347 aa17.17■□□□□ 0.34
CCDC138-204ENST00000447782 TTC21BQ7Z4L5 1316 aa17.17■□□□□ 0.34
CCDC138-204ENST00000447782 BRD4O60885 1362 aaPredicted RBP17.16■□□□□ 0.34
CCDC138-204ENST00000447782 NINLQ9Y2I6 1382 aa17.16■□□□□ 0.34
CCDC138-204ENST00000447782 PSDA5PKW4 1024 aaPredicted RBP17.16■□□□□ 0.34
CCDC138-204ENST00000447782 EN1Q05925 392 aaPredicted RBP17.16■□□□□ 0.34
CCDC138-204ENST00000447782 NLRP13Q86W25 1043 aa17.15■□□□□ 0.34
CCDC138-204ENST00000447782 SSH2Q76I76 1423 aa17.14■□□□□ 0.33
CCDC138-204ENST00000447782 MON2Q7Z3U7 1717 aa17.14■□□□□ 0.33
CCDC138-204ENST00000447782 SOX12O15370 315 aa17.14■□□□□ 0.33
CCDC138-204ENST00000447782 FAM196AQ6ZSG2 479 aa17.14■□□□□ 0.33
CCDC138-204ENST00000447782 CAMKK2Q96RR4 588 aa17.14■□□□□ 0.33
CCDC138-204ENST00000447782 KIAA0232Q92628 1395 aa17.14■□□□□ 0.33
CCDC138-204ENST00000447782 ZBTB7CA1YPR0 619 aa17.13■□□□□ 0.33
CCDC138-204ENST00000447782 ZC3H6P61129 1189 aaKnown RBP17.13■□□□□ 0.33
CCDC138-204ENST00000447782 BARGINQ6ZT62 677 aa17.13■□□□□ 0.33
CCDC138-204ENST00000447782 NRKQ7Z2Y5 1582 aa17.13■□□□□ 0.33
CCDC138-204ENST00000447782 TTC21AQ8NDW8 1320 aa17.13■□□□□ 0.33
CCDC138-204ENST00000447782 PHRF1Q9P1Y6 1649 aaKnown RBP17.12■□□□□ 0.33
CCDC138-204ENST00000447782 NME9Q86XW9 330 aa17.12■□□□□ 0.33
CCDC138-204ENST00000447782 PIK3C2AO00443 1686 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms