RNA–Protein interactions for RNA: ENST00000447456.1

CCDC18-205, Transcript of coiled-coil domain containing 18, humanhuman

TSL 1 (best)

Gene CCDC18, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-205ENST00000447456 MON2Q7Z3U7 1717 aa12.61□□□□□ -0.39
CCDC18-205ENST00000447456 SBNO1A3KN83 1393 aa12.6□□□□□ -0.39
CCDC18-205ENST00000447456 TTC21BQ7Z4L5 1316 aa12.6□□□□□ -0.39
CCDC18-205ENST00000447456 NSD2O96028 1365 aa12.59□□□□□ -0.39
CCDC18-205ENST00000447456 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.59□□□□□ -0.39
CCDC18-205ENST00000447456 SOS2Q07890 1332 aaPredicted RBP12.59□□□□□ -0.39
CCDC18-205ENST00000447456 AHDC1Q5TGY3 1603 aaPredicted RBP12.59□□□□□ -0.39
CCDC18-205ENST00000447456 NPC1L1Q9UHC9 1359 aa12.58□□□□□ -0.4
CCDC18-205ENST00000447456 PER1O15534 1290 aaPredicted RBP12.58□□□□□ -0.4
CCDC18-205ENST00000447456 XPCQ01831 940 aaPredicted RBP12.58□□□□□ -0.4
CCDC18-205ENST00000447456 NHSL1Q5SYE7 1610 aa12.58□□□□□ -0.4
CCDC18-205ENST00000447456 PXDNQ92626 1479 aa12.58□□□□□ -0.4
CCDC18-205ENST00000447456 ARHGEF10O15013 1369 aa12.57□□□□□ -0.4
CCDC18-205ENST00000447456 SSH2Q76I76 1423 aa12.57□□□□□ -0.4
CCDC18-205ENST00000447456 LMOD2Q6P5Q4 547 aa12.57□□□□□ -0.4
CCDC18-205ENST00000447456 ABTB2Q8N961 1025 aa12.57□□□□□ -0.4
CCDC18-205ENST00000447456 DDX17Q92841 729 aaKnown RBP12.57□□□□□ -0.4
CCDC18-205ENST00000447456 LRRC59Q96AG4 307 aaKnown RBP12.57□□□□□ -0.4
CCDC18-205ENST00000447456 TNS3Q68CZ2 1445 aa12.56□□□□□ -0.4
CCDC18-205ENST00000447456 AMER1Q5JTC6 1135 aaPredicted RBP12.56□□□□□ -0.4
CCDC18-205ENST00000447456 DIEXFQ68CQ4 756 aaKnown RBP12.56□□□□□ -0.4
CCDC18-205ENST00000447456 COG3Q96JB2 828 aa12.56□□□□□ -0.4
CCDC18-205ENST00000447456 SPATA31A3Q5VYP0 1347 aa12.56□□□□□ -0.4
CCDC18-205ENST00000447456 NRKQ7Z2Y5 1582 aa12.56□□□□□ -0.4
CCDC18-205ENST00000447456 FYB1O15117 783 aa12.55□□□□□ -0.4
CCDC18-205ENST00000447456 ANP32CO43423 234 aa12.55□□□□□ -0.4
CCDC18-205ENST00000447456 NLRP6P59044 892 aa12.55□□□□□ -0.4
CCDC18-205ENST00000447456 NLRP13Q86W25 1043 aa12.55□□□□□ -0.4
CCDC18-205ENST00000447456 PHLPP1O60346 1717 aa12.54□□□□□ -0.4
CCDC18-205ENST00000447456 TRPM3Q9HCF6 1732 aaPredicted RBP12.54□□□□□ -0.4
CCDC18-205ENST00000447456 MORC1Q86VD1 984 aa12.54□□□□□ -0.4
CCDC18-205ENST00000447456 NME9Q86XW9 330 aa12.54□□□□□ -0.4
CCDC18-205ENST00000447456 USP31Q70CQ4 1352 aa12.54□□□□□ -0.4
CCDC18-205ENST00000447456 KIF20BQ96Q89 1820 aa12.53□□□□□ -0.4
CCDC18-205ENST00000447456 RALBP1Q15311 655 aa12.53□□□□□ -0.4
CCDC18-205ENST00000447456 CC2D1BQ5T0F9 858 aaKnown RBP12.53□□□□□ -0.4
CCDC18-205ENST00000447456 FBXO41Q8TF61 875 aa12.53□□□□□ -0.4
CCDC18-205ENST00000447456 GGNBP2Q9H3C7 697 aa12.53□□□□□ -0.4
CCDC18-205ENST00000447456 ALS2Q96Q42 1657 aa12.51□□□□□ -0.41
CCDC18-205ENST00000447456 CNGB1Q14028 1251 aaPredicted RBP12.51□□□□□ -0.41
CCDC18-205ENST00000447456 NUTM2GQ5VZR2 741 aa12.51□□□□□ -0.41
CCDC18-205ENST00000447456 KCNH5Q8NCM2 988 aa12.51□□□□□ -0.41
CCDC18-205ENST00000447456 COL16A1Q07092 1604 aaPredicted RBP12.51□□□□□ -0.41
CCDC18-205ENST00000447456 PIK3C2AO00443 1686 aa12.51□□□□□ -0.41
CCDC18-205ENST00000447456 HAP1P54257 671 aaPredicted RBP12.5□□□□□ -0.41
CCDC18-205ENST00000447456 ANKRD26Q9UPS8 1709 aa12.5□□□□□ -0.41
CCDC18-205ENST00000447456 OVOS2A0A0J9YW53 1432 aa12.49□□□□□ -0.41
CCDC18-205ENST00000447456 OVOS2Q6IE36 1432 aa12.49□□□□□ -0.41
CCDC18-205ENST00000447456 JCADQ9P266 1359 aa12.49□□□□□ -0.41
CCDC18-205ENST00000447456 USP19O94966 1318 aa12.49□□□□□ -0.41
CCDC18-205ENST00000447456 HSPA1LP34931 641 aa12.49□□□□□ -0.41
CCDC18-205ENST00000447456 MAPK8IP2Q13387 824 aaPredicted RBP12.49□□□□□ -0.41
CCDC18-205ENST00000447456 PRKRIP1Q9H875 184 aaPredicted RBP12.49□□□□□ -0.41
CCDC18-205ENST00000447456 USP54Q70EL1 1684 aa12.48□□□□□ -0.41
CCDC18-205ENST00000447456 MED1Q15648 1581 aaPredicted RBP12.48□□□□□ -0.41
CCDC18-205ENST00000447456 PARD3Q8TEW0 1356 aa12.48□□□□□ -0.41
CCDC18-205ENST00000447456 ZRANB1Q9UGI0 708 aa12.48□□□□□ -0.41
CCDC18-205ENST00000447456 PNPLA6Q8IY17 1366 aa12.47□□□□□ -0.41
CCDC18-205ENST00000447456 GCP02774 474 aa12.47□□□□□ -0.41
CCDC18-205ENST00000447456 TNNT2P45379 298 aaPredicted RBP12.47□□□□□ -0.41
CCDC18-205ENST00000447456 AATKQ6ZMQ8 1374 aa12.46□□□□□ -0.41
CCDC18-205ENST00000447456 MYBBP1AQ9BQG0 1328 aaKnown RBP12.46□□□□□ -0.41
CCDC18-205ENST00000447456 PLEKHG5O94827 1062 aa12.46□□□□□ -0.41
CCDC18-205ENST00000447456 SHPRHQ149N8 1683 aa12.45□□□□□ -0.42
CCDC18-205ENST00000447456 COL22A1Q8NFW1 1626 aaPredicted RBP12.45□□□□□ -0.42
CCDC18-205ENST00000447456 SOX12O15370 315 aa12.45□□□□□ -0.42
CCDC18-205ENST00000447456 SLIT3O75094 1523 aa12.45□□□□□ -0.42
CCDC18-205ENST00000447456 SPATA31A6Q5VVP1 1343 aa12.44□□□□□ -0.42
CCDC18-205ENST00000447456 CABLES1Q8TDN4 633 aa12.44□□□□□ -0.42
CCDC18-205ENST00000447456 KIF24Q5T7B8 1368 aa12.43□□□□□ -0.42
CCDC18-205ENST00000447456 PPP2R1AP30153 589 aa12.43□□□□□ -0.42
CCDC18-205ENST00000447456 AMPHP49418 695 aa12.43□□□□□ -0.42
CCDC18-205ENST00000447456 CFAP53Q96M91 514 aa12.43□□□□□ -0.42
CCDC18-205ENST00000447456 CPDO75976 1380 aa12.43□□□□□ -0.42
CCDC18-205ENST00000447456 MARF1Q9Y4F3 1742 aaKnown RBP12.42□□□□□ -0.42
CCDC18-205ENST00000447456 NFAT5O94916 1531 aa12.42□□□□□ -0.42
CCDC18-205ENST00000447456 PHRF1Q9P1Y6 1649 aaKnown RBP12.42□□□□□ -0.42
CCDC18-205ENST00000447456 PPM1GO15355 546 aaPredicted RBP12.42□□□□□ -0.42
CCDC18-205ENST00000447456 PRDM11Q9NQV5 511 aa12.42□□□□□ -0.42
CCDC18-205ENST00000447456 RTL1A6NKG5 1358 aa12.42□□□□□ -0.42
CCDC18-205ENST00000447456 MAP3K19Q56UN5 1328 aa12.41□□□□□ -0.42
CCDC18-205ENST00000447456 ZBTB7CA1YPR0 619 aa12.41□□□□□ -0.42
CCDC18-205ENST00000447456 NUTM2BA6NNL0 878 aaPredicted RBP12.41□□□□□ -0.42
CCDC18-205ENST00000447456 NUTM2EB1AL46 878 aaPredicted RBP12.41□□□□□ -0.42
CCDC18-205ENST00000447456 MTHFSP49914 203 aa12.41□□□□□ -0.42
CCDC18-205ENST00000447456 ZC3H6P61129 1189 aaKnown RBP12.41□□□□□ -0.42
CCDC18-205ENST00000447456 RRS1Q15050 365 aaKnown RBP12.41□□□□□ -0.42
CCDC18-205ENST00000447456 ARHGEF25Q86VW2 580 aa12.41□□□□□ -0.42
CCDC18-205ENST00000447456 NUTM2AQ8IVF1 878 aaPredicted RBP12.41□□□□□ -0.42
CCDC18-205ENST00000447456 POLKQ9UBT6 870 aa12.41□□□□□ -0.42
CCDC18-205ENST00000447456 MAP2P11137 1827 aaKnown RBP12.4□□□□□ -0.42
CCDC18-205ENST00000447456 FLT4P35916 1363 aa12.4□□□□□ -0.42
CCDC18-205ENST00000447456 KIAA0232Q92628 1395 aa12.4□□□□□ -0.42
CCDC18-205ENST00000447456 ABCA3Q99758 1704 aa12.4□□□□□ -0.43
CCDC18-205ENST00000447456 CRYBG1Q9Y4K1 1723 aa12.4□□□□□ -0.43
CCDC18-205ENST00000447456 SMG6Q86US8 1419 aaKnown RBP12.39□□□□□ -0.43
CCDC18-205ENST00000447456 ABCC6O95255 1503 aa12.39□□□□□ -0.43
CCDC18-205ENST00000447456 CCER2I3L3R5 266 aa12.39□□□□□ -0.43
CCDC18-205ENST00000447456 IP6K1Q92551 441 aa12.39□□□□□ -0.43
CCDC18-205ENST00000447456 EMILIN1Q9Y6C2 1016 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms