RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 CABP2Q9NPB3 220 aa17.38■□□□□ 0.37
DDX56-206ENST00000446987 DISP3Q9P2K9 1392 aa17.38■□□□□ 0.37
DDX56-206ENST00000446987 PHF8Q9UPP1 1060 aa17.37■□□□□ 0.37
DDX56-206ENST00000446987 AKAP12Q02952 1782 aa17.37■□□□□ 0.37
DDX56-206ENST00000446987 EVC2Q86UK5 1308 aa17.37■□□□□ 0.37
DDX56-206ENST00000446987 ALS2Q96Q42 1657 aa17.37■□□□□ 0.37
DDX56-206ENST00000446987 COL22A1Q8NFW1 1626 aaPredicted RBP17.36■□□□□ 0.37
DDX56-206ENST00000446987 MYOM1P52179 1685 aa17.36■□□□□ 0.37
DDX56-206ENST00000446987 FOXO3O43524 673 aa17.36■□□□□ 0.37
DDX56-206ENST00000446987 SLC24A1O60721 1099 aa17.36■□□□□ 0.37
DDX56-206ENST00000446987 DAXXQ9UER7 740 aaPredicted RBP17.36■□□□□ 0.37
DDX56-206ENST00000446987 POLR3AO14802 1390 aaPredicted RBP17.36■□□□□ 0.37
DDX56-206ENST00000446987 PPIP5K1Q6PFW1 1433 aa17.36■□□□□ 0.37
DDX56-206ENST00000446987 PMFBP1Q8TBY8 1022 aa17.35■□□□□ 0.37
DDX56-206ENST00000446987 NPHP3Q7Z494 1330 aa17.35■□□□□ 0.37
DDX56-206ENST00000446987 HNRNPUQ00839 825 aaKnown RBP eCLIP17.35■□□□□ 0.37
DDX56-206ENST00000446987 NRKQ7Z2Y5 1582 aa17.35■□□□□ 0.37
DDX56-206ENST00000446987 SRPK2P78362 688 aaKnown RBP17.34■□□□□ 0.37
DDX56-206ENST00000446987 XPCQ01831 940 aaPredicted RBP17.34■□□□□ 0.37
DDX56-206ENST00000446987 CD163L1Q9NR16 1453 aa17.33■□□□□ 0.37
DDX56-206ENST00000446987 PNPLA6Q8IY17 1366 aa17.33■□□□□ 0.37
DDX56-206ENST00000446987 MON2Q7Z3U7 1717 aa17.33■□□□□ 0.36
DDX56-206ENST00000446987 ABCA3Q99758 1704 aa17.33■□□□□ 0.36
DDX56-206ENST00000446987 CRYBG1Q9Y4K1 1723 aa17.33■□□□□ 0.36
DDX56-206ENST00000446987 HSPA5P11021 654 aaKnown RBP17.33■□□□□ 0.36
DDX56-206ENST00000446987 CCDC61Q9Y6R9 512 aa17.33■□□□□ 0.36
DDX56-206ENST00000446987 LRP6O75581 1613 aa17.32■□□□□ 0.36
DDX56-206ENST00000446987 MED1Q15648 1581 aaPredicted RBP17.32■□□□□ 0.36
DDX56-206ENST00000446987 JCADQ9P266 1359 aa17.32■□□□□ 0.36
DDX56-206ENST00000446987 PLEKHG3A1L390 1219 aa17.32■□□□□ 0.36
DDX56-206ENST00000446987 ATAD2Q6PL18 1390 aa17.31■□□□□ 0.36
DDX56-206ENST00000446987 IRX6P78412 446 aaPredicted RBP17.31■□□□□ 0.36
DDX56-206ENST00000446987 TNS3Q68CZ2 1445 aa17.3■□□□□ 0.36
DDX56-206ENST00000446987 FAM43AQ8N2R8 423 aa17.3■□□□□ 0.36
DDX56-206ENST00000446987 ACEP12821 1306 aa17.29■□□□□ 0.36
DDX56-206ENST00000446987 EIF4G2P78344 907 aaKnown RBP eCLIP17.29■□□□□ 0.36
DDX56-206ENST00000446987 CPSF1Q10570 1443 aaKnown RBP17.29■□□□□ 0.36
DDX56-206ENST00000446987 SBNO1A3KN83 1393 aa17.29■□□□□ 0.36
DDX56-206ENST00000446987 B4GALNT3Q6L9W6 998 aa17.29■□□□□ 0.36
DDX56-206ENST00000446987 KRT28Q7Z3Y7 464 aa17.29■□□□□ 0.36
DDX56-206ENST00000446987 SSH2Q76I76 1423 aa17.29■□□□□ 0.36
DDX56-206ENST00000446987 SPATA31A3Q5VYP0 1347 aa17.28■□□□□ 0.36
DDX56-206ENST00000446987 MARF1Q9Y4F3 1742 aaKnown RBP17.28■□□□□ 0.36
DDX56-206ENST00000446987 CABP1Q9NZU7 370 aa17.28■□□□□ 0.36
DDX56-206ENST00000446987 USP6P35125 1406 aa17.27■□□□□ 0.36
DDX56-206ENST00000446987 PUS7Q96PZ0 661 aaKnown RBP17.27■□□□□ 0.36
DDX56-206ENST00000446987 PIK3C2AO00443 1686 aa17.27■□□□□ 0.35
DDX56-206ENST00000446987 NEFMP07197 916 aa17.27■□□□□ 0.35
DDX56-206ENST00000446987 LRRC59Q96AG4 307 aaKnown RBP17.27■□□□□ 0.35
DDX56-206ENST00000446987 ZBED9Q6R2W3 1325 aa17.26■□□□□ 0.35
DDX56-206ENST00000446987 NGDNQ8NEJ9 315 aaKnown RBP17.25■□□□□ 0.35
DDX56-206ENST00000446987 TMF1P82094 1093 aa17.24■□□□□ 0.35
DDX56-206ENST00000446987 GSE1Q14687 1217 aa17.24■□□□□ 0.35
DDX56-206ENST00000446987 PHRF1Q9P1Y6 1649 aaKnown RBP17.24■□□□□ 0.35
DDX56-206ENST00000446987 PSME1Q06323 249 aa17.23■□□□□ 0.35
DDX56-206ENST00000446987 RNF123Q5XPI4 1314 aa17.23■□□□□ 0.35
DDX56-206ENST00000446987 A0A1W2PP64 1363 aa17.23■□□□□ 0.35
DDX56-206ENST00000446987 USP54Q70EL1 1684 aa17.23■□□□□ 0.35
DDX56-206ENST00000446987 SLC12A5Q9H2X9 1139 aa17.22■□□□□ 0.35
DDX56-206ENST00000446987 SPATA31A6Q5VVP1 1343 aa17.22■□□□□ 0.35
DDX56-206ENST00000446987 NINLQ9Y2I6 1382 aa17.21■□□□□ 0.35
DDX56-206ENST00000446987 ARHGEF10O15013 1369 aa17.2■□□□□ 0.34
DDX56-206ENST00000446987 BRPF3Q9ULD4 1205 aa17.19■□□□□ 0.34
DDX56-206ENST00000446987 BRD4O60885 1362 aaPredicted RBP17.19■□□□□ 0.34
DDX56-206ENST00000446987 KTN1Q86UP2 1357 aaKnown RBP17.18■□□□□ 0.34
DDX56-206ENST00000446987 ANKRD36BQ8N2N9 1353 aa17.18■□□□□ 0.34
DDX56-206ENST00000446987 SMG6Q86US8 1419 aaKnown RBP17.18■□□□□ 0.34
DDX56-206ENST00000446987 TMC1Q8TDI8 760 aa17.17■□□□□ 0.34
DDX56-206ENST00000446987 SLIT3O75094 1523 aa17.17■□□□□ 0.34
DDX56-206ENST00000446987 EDC4Q6P2E9 1401 aaKnown RBP17.16■□□□□ 0.34
DDX56-206ENST00000446987 TTC21BQ7Z4L5 1316 aa17.16■□□□□ 0.34
DDX56-206ENST00000446987 USP19O94966 1318 aa17.15■□□□□ 0.34
DDX56-206ENST00000446987 KIF7Q2M1P5 1343 aa17.15■□□□□ 0.34
DDX56-206ENST00000446987 CABLES1Q8TDN4 633 aa17.15■□□□□ 0.34
DDX56-206ENST00000446987 NUTM2BA6NNL0 878 aaPredicted RBP17.14■□□□□ 0.33
DDX56-206ENST00000446987 NUTM2EB1AL46 878 aaPredicted RBP17.14■□□□□ 0.33
DDX56-206ENST00000446987 CDCA8Q53HL2 280 aa17.14■□□□□ 0.33
DDX56-206ENST00000446987 NUTM2AQ8IVF1 878 aaPredicted RBP17.14■□□□□ 0.33
DDX56-206ENST00000446987 KIF20BQ96Q89 1820 aa17.14■□□□□ 0.33
DDX56-206ENST00000446987 PLCH1Q4KWH8 1693 aa17.14■□□□□ 0.33
DDX56-206ENST00000446987 TCERG1O14776 1098 aaKnown RBP17.14■□□□□ 0.33
DDX56-206ENST00000446987 ZNF692Q9BU19 519 aaPredicted RBP17.14■□□□□ 0.33
DDX56-206ENST00000446987 PODXL2Q9NZ53 605 aa17.14■□□□□ 0.33
DDX56-206ENST00000446987 DDRGK1Q96HY6 314 aa17.13■□□□□ 0.33
DDX56-206ENST00000446987 ZMYND15Q9H091 742 aa17.13■□□□□ 0.33
DDX56-206ENST00000446987 MS4A1P11836 297 aa17.12■□□□□ 0.33
DDX56-206ENST00000446987 NUTM2GQ5VZR2 741 aa17.12■□□□□ 0.33
DDX56-206ENST00000446987 LMOD2Q6P5Q4 547 aa17.12■□□□□ 0.33
DDX56-206ENST00000446987 RGS17Q9UGC6 210 aaPredicted RBP17.12■□□□□ 0.33
DDX56-206ENST00000446987 OVOS2A0A0J9YW53 1432 aa17.12■□□□□ 0.33
DDX56-206ENST00000446987 OVOS2Q6IE36 1432 aa17.12■□□□□ 0.33
DDX56-206ENST00000446987 TTC21AQ8NDW8 1320 aa17.12■□□□□ 0.33
DDX56-206ENST00000446987 NFAT5O94916 1531 aa17.11■□□□□ 0.33
DDX56-206ENST00000446987 HDGFL2Q7Z4V5 671 aaPredicted RBP17.11■□□□□ 0.33
DDX56-206ENST00000446987 NRAPQ86VF7 1730 aa17.11■□□□□ 0.33
DDX56-206ENST00000446987 TERF2IPQ9NYB0 399 aa17.11■□□□□ 0.33
DDX56-206ENST00000446987 CCDC7Q96M83 1385 aa17.11■□□□□ 0.33
DDX56-206ENST00000446987 CARD14Q9BXL6 1004 aa17.1■□□□□ 0.33
DDX56-206ENST00000446987 ZRANB1Q9UGI0 708 aa17.1■□□□□ 0.33
DDX56-206ENST00000446987 USP31Q70CQ4 1352 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 157.6 ms