RNA–Protein interactions for RNA: ENST00000446688.5

TNS1-209, Transcript of tensin 1, humanhuman

TSL 1 (best) BASIC

Gene TNS1, Length 4,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNS1-209ENST00000446688 ERBINQ96RT1 1412 aa12.12□□□□□ -0.47
TNS1-209ENST00000446688 MEX3CQ5U5Q3 659 aaKnown RBP12.12□□□□□ -0.47
TNS1-209ENST00000446688 CREBRFQ8IUR6 639 aa12.12□□□□□ -0.47
TNS1-209ENST00000446688 LRPPRCP42704 1394 aaKnown RBP12.12□□□□□ -0.47
TNS1-209ENST00000446688 DHX29Q7Z478 1369 aaKnown RBP12.12□□□□□ -0.47
TNS1-209ENST00000446688 CDK19Q9BWU1 502 aa12.12□□□□□ -0.47
TNS1-209ENST00000446688 TARBP1Q13395 1621 aaKnown RBP12.12□□□□□ -0.47
TNS1-209ENST00000446688 VPS37DQ86XT2 251 aa12.11□□□□□ -0.47
TNS1-209ENST00000446688 HMGN5P82970 282 aaKnown RBP12.11□□□□□ -0.47
TNS1-209ENST00000446688 AKAP17AQ02040 695 aaKnown RBP12.11□□□□□ -0.47
TNS1-209ENST00000446688 PODXL2Q9NZ53 605 aa12.11□□□□□ -0.47
TNS1-209ENST00000446688 TPM4P67936 248 aa12.11□□□□□ -0.47
TNS1-209ENST00000446688 XRCC6P12956 609 aaKnown RBP eCLIP12.11□□□□□ -0.47
TNS1-209ENST00000446688 EXOSC9Q06265 439 aaKnown RBP12.11□□□□□ -0.47
TNS1-209ENST00000446688 CT47B1P0C2W7 299 aaPredicted RBP12.1□□□□□ -0.47
TNS1-209ENST00000446688 RBM10P98175 930 aaKnown RBP12.1□□□□□ -0.47
TNS1-209ENST00000446688 HSP90AB4PQ58FF6 505 aa12.1□□□□□ -0.47
TNS1-209ENST00000446688 SULT6B1Q6IMI4 303 aa12.1□□□□□ -0.47
TNS1-209ENST00000446688 SYNE3Q6ZMZ3 975 aa12.1□□□□□ -0.47
TNS1-209ENST00000446688 GAS2L2Q8NHY3 880 aa12.1□□□□□ -0.47
TNS1-209ENST00000446688 MBD3O95983 291 aa12.1□□□□□ -0.47
TNS1-209ENST00000446688 UBTFL1P0CB47 393 aaPredicted RBP12.1□□□□□ -0.47
TNS1-209ENST00000446688 VPS53Q5VIR6 699 aa12.1□□□□□ -0.47
TNS1-209ENST00000446688 NEUROD6Q96NK8 337 aa12.1□□□□□ -0.47
TNS1-209ENST00000446688 NKTRP30414 1462 aaKnown RBP12.1□□□□□ -0.47
TNS1-209ENST00000446688 CDC45O75419 566 aa12.1□□□□□ -0.47
TNS1-209ENST00000446688 WDR63Q8IWG1 891 aa12.1□□□□□ -0.47
TNS1-209ENST00000446688 TBC1D32Q96NH3 1257 aa12.1□□□□□ -0.47
TNS1-209ENST00000446688 CAVIN1Q6NZI2 390 aaKnown RBP12.09□□□□□ -0.47
TNS1-209ENST00000446688 ABCC5O15440 1437 aa12.09□□□□□ -0.47
TNS1-209ENST00000446688 ATP6V1DQ9Y5K8 247 aa12.09□□□□□ -0.47
TNS1-209ENST00000446688 CFAP43Q8NDM7 1665 aa12.09□□□□□ -0.47
TNS1-209ENST00000446688 CHMP4CQ96CF2 233 aa12.09□□□□□ -0.47
TNS1-209ENST00000446688 ZNF692Q9BU19 519 aaPredicted RBP12.09□□□□□ -0.47
TNS1-209ENST00000446688 THOC2Q8NI27 1593 aaKnown RBP12.09□□□□□ -0.47
TNS1-209ENST00000446688 MVPQ14764 893 aaKnown RBP12.08□□□□□ -0.47
TNS1-209ENST00000446688 STRN4Q9NRL3 753 aa12.08□□□□□ -0.47
TNS1-209ENST00000446688 K7ELQ4 463 aaPredicted RBP12.08□□□□□ -0.48
TNS1-209ENST00000446688 RABEP1Q15276 862 aa12.08□□□□□ -0.48
TNS1-209ENST00000446688 INTS3Q68E01 1043 aaKnown RBP12.08□□□□□ -0.48
TNS1-209ENST00000446688 NOL10Q9BSC4 688 aaKnown RBP12.08□□□□□ -0.48
TNS1-209ENST00000446688 PLEKHO1Q53GL0 409 aaPredicted RBP12.08□□□□□ -0.48
TNS1-209ENST00000446688 KIF14Q15058 1648 aa12.08□□□□□ -0.48
TNS1-209ENST00000446688 CPLX1O14810 134 aa12.08□□□□□ -0.48
TNS1-209ENST00000446688 RAD21O60216 631 aa12.08□□□□□ -0.48
TNS1-209ENST00000446688 TRDNQ13061 729 aa12.07□□□□□ -0.48
TNS1-209ENST00000446688 ANKLE2Q86XL3 938 aa12.07□□□□□ -0.48
TNS1-209ENST00000446688 TSR2Q969E8 191 aaKnown RBP12.07□□□□□ -0.48
TNS1-209ENST00000446688 TWISTNBQ3B726 338 aaPredicted RBP12.07□□□□□ -0.48
TNS1-209ENST00000446688 RNF20Q5VTR2 975 aa12.07□□□□□ -0.48
TNS1-209ENST00000446688 CWC22Q9HCG8 908 aaKnown RBP12.07□□□□□ -0.48
TNS1-209ENST00000446688 PARD3Q8TEW0 1356 aa12.07□□□□□ -0.48
TNS1-209ENST00000446688 CD109Q6YHK3 1445 aa12.06□□□□□ -0.48
TNS1-209ENST00000446688 SURF6O75683 361 aaKnown RBP12.06□□□□□ -0.48
TNS1-209ENST00000446688 RAPGEF6Q8TEU7 1601 aa12.06□□□□□ -0.48
TNS1-209ENST00000446688 UQCRHLA0A096LP55 91 aa12.06□□□□□ -0.48
TNS1-209ENST00000446688 ERC2O15083 957 aa12.06□□□□□ -0.48
TNS1-209ENST00000446688 UQCRHP07919 91 aa12.06□□□□□ -0.48
TNS1-209ENST00000446688 GNAI3P08754 354 aa12.06□□□□□ -0.48
TNS1-209ENST00000446688 CCDC30Q5VVM6 783 aa12.06□□□□□ -0.48
TNS1-209ENST00000446688 KIAA0556O60303 1618 aa12.06□□□□□ -0.48
TNS1-209ENST00000446688 FAM177BA6PVY3 158 aa12.06□□□□□ -0.48
TNS1-209ENST00000446688 ZNF771Q7L3S4 317 aaPredicted RBP12.06□□□□□ -0.48
TNS1-209ENST00000446688 CLASRPQ8N2M8 674 aaKnown RBP12.06□□□□□ -0.48
TNS1-209ENST00000446688 GCC1Q96CN9 775 aa12.06□□□□□ -0.48
TNS1-209ENST00000446688 AMOTL1Q8IY63 956 aa12.05□□□□□ -0.48
TNS1-209ENST00000446688 RALGAPBQ86X10 1494 aa12.05□□□□□ -0.48
TNS1-209ENST00000446688 ARHGEF11O15085 1522 aa12.05□□□□□ -0.48
TNS1-209ENST00000446688 HDGFL1Q5TGJ6 251 aa12.05□□□□□ -0.48
TNS1-209ENST00000446688 TPM3P06753 285 aa12.04□□□□□ -0.48
TNS1-209ENST00000446688 WWC1Q8IX03 1113 aa12.04□□□□□ -0.48
TNS1-209ENST00000446688 RBM42Q9BTD8 480 aaKnown RBP12.04□□□□□ -0.48
TNS1-209ENST00000446688 RRAGDQ9NQL2 400 aaPredicted RBP12.04□□□□□ -0.48
TNS1-209ENST00000446688 CCDC61Q9Y6R9 512 aa12.04□□□□□ -0.48
TNS1-209ENST00000446688 PES1O00541 588 aaKnown RBP12.04□□□□□ -0.48
TNS1-209ENST00000446688 IGHDP01880 384 aa12.04□□□□□ -0.48
TNS1-209ENST00000446688 TATP17735 454 aaPredicted RBP12.04□□□□□ -0.48
TNS1-209ENST00000446688 ZNF530Q6P9A1 599 aaPredicted RBP12.04□□□□□ -0.48
TNS1-209ENST00000446688 WASHC4Q2M389 1173 aa12.03□□□□□ -0.48
TNS1-209ENST00000446688 FBXW7Q969H0 707 aa12.03□□□□□ -0.48
TNS1-209ENST00000446688 KDM2BQ8NHM5 1336 aa12.03□□□□□ -0.48
TNS1-209ENST00000446688 RTEL1-TNFRSF6BF6WH68 1400 aa12.03□□□□□ -0.48
TNS1-209ENST00000446688 DHX16O60231 1041 aaKnown RBP12.03□□□□□ -0.48
TNS1-209ENST00000446688 PRPF40AO75400 957 aaKnown RBP12.03□□□□□ -0.48
TNS1-209ENST00000446688 RPGRIP1LQ68CZ1 1315 aa12.03□□□□□ -0.48
TNS1-209ENST00000446688 BECN2A8MW95 431 aa12.03□□□□□ -0.48
TNS1-209ENST00000446688 SLC4A2P04920 1241 aa12.03□□□□□ -0.48
TNS1-209ENST00000446688 RBM33Q96EV2 1170 aaKnown RBP12.03□□□□□ -0.48
TNS1-209ENST00000446688 INSRP06213 1382 aa12.03□□□□□ -0.48
TNS1-209ENST00000446688 VPS37CA5D8V6 355 aaPredicted RBP12.03□□□□□ -0.48
TNS1-209ENST00000446688 RARSP54136 660 aaKnown RBP12.03□□□□□ -0.48
TNS1-209ENST00000446688 TRIM29Q14134 588 aa12.03□□□□□ -0.48
TNS1-209ENST00000446688 RRS1Q15050 365 aaKnown RBP12.03□□□□□ -0.48
TNS1-209ENST00000446688 DDX54Q8TDD1 881 aaKnown RBP12.03□□□□□ -0.48
TNS1-209ENST00000446688 PRDM11Q9NQV5 511 aa12.03□□□□□ -0.48
TNS1-209ENST00000446688 XPCQ01831 940 aaPredicted RBP12.02□□□□□ -0.48
TNS1-209ENST00000446688 TOM1L2Q6ZVM7 507 aa12.02□□□□□ -0.48
TNS1-209ENST00000446688 TNPO1Q92973 898 aaKnown RBP12.02□□□□□ -0.48
TNS1-209ENST00000446688 TSPY26PQ9H489 355 aa12.02□□□□□ -0.48
TNS1-209ENST00000446688 TCOF1Q13428 1488 aaKnown RBP12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms