RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 ITSN1Q15811 1721 aa10.37□□□□□ -0.75
SF3A3P1-201ENST00000446317 PLEKHG3A1L390 1219 aa10.36□□□□□ -0.75
SF3A3P1-201ENST00000446317 ANKRD36BQ8N2N9 1353 aa10.36□□□□□ -0.75
SF3A3P1-201ENST00000446317 SLC24A1O60721 1099 aa10.36□□□□□ -0.75
SF3A3P1-201ENST00000446317 CABLES1Q8TDN4 633 aa10.36□□□□□ -0.75
SF3A3P1-201ENST00000446317 KNSTRNQ9Y448 316 aa10.36□□□□□ -0.75
SF3A3P1-201ENST00000446317 USP6P35125 1406 aa10.35□□□□□ -0.75
SF3A3P1-201ENST00000446317 TTC21BQ7Z4L5 1316 aa10.35□□□□□ -0.75
SF3A3P1-201ENST00000446317 CPSF1Q10570 1443 aaKnown RBP10.34□□□□□ -0.75
SF3A3P1-201ENST00000446317 ABTB2Q8N961 1025 aa10.34□□□□□ -0.75
SF3A3P1-201ENST00000446317 AKAP12Q02952 1782 aa10.33□□□□□ -0.76
SF3A3P1-201ENST00000446317 POLR3AO14802 1390 aaPredicted RBP10.33□□□□□ -0.76
SF3A3P1-201ENST00000446317 PER1O15534 1290 aaPredicted RBP10.33□□□□□ -0.76
SF3A3P1-201ENST00000446317 ILDR1Q86SU0 546 aaPredicted RBP10.33□□□□□ -0.76
SF3A3P1-201ENST00000446317 PUS7Q96PZ0 661 aaKnown RBP10.33□□□□□ -0.76
SF3A3P1-201ENST00000446317 NPHP3Q7Z494 1330 aa10.32□□□□□ -0.76
SF3A3P1-201ENST00000446317 NUTM2BA6NNL0 878 aaPredicted RBP10.32□□□□□ -0.76
SF3A3P1-201ENST00000446317 NUTM2EB1AL46 878 aaPredicted RBP10.32□□□□□ -0.76
SF3A3P1-201ENST00000446317 FYB1O15117 783 aa10.32□□□□□ -0.76
SF3A3P1-201ENST00000446317 HSPA1LP34931 641 aa10.32□□□□□ -0.76
SF3A3P1-201ENST00000446317 NLRP6P59044 892 aa10.32□□□□□ -0.76
SF3A3P1-201ENST00000446317 PPP4R3CPQ6ZMV5 832 aa10.32□□□□□ -0.76
SF3A3P1-201ENST00000446317 NUTM2AQ8IVF1 878 aaPredicted RBP10.32□□□□□ -0.76
SF3A3P1-201ENST00000446317 MIER1Q8N108 512 aa10.32□□□□□ -0.76
SF3A3P1-201ENST00000446317 PXDNQ92626 1479 aa10.32□□□□□ -0.76
SF3A3P1-201ENST00000446317 MON2Q7Z3U7 1717 aa10.32□□□□□ -0.76
SF3A3P1-201ENST00000446317 EDC4Q6P2E9 1401 aaKnown RBP10.32□□□□□ -0.76
SF3A3P1-201ENST00000446317 KIF1AQ12756 1690 aa10.32□□□□□ -0.76
SF3A3P1-201ENST00000446317 NINLQ9Y2I6 1382 aa10.32□□□□□ -0.76
SF3A3P1-201ENST00000446317 NRKQ7Z2Y5 1582 aa10.31□□□□□ -0.76
SF3A3P1-201ENST00000446317 PPM1GO15355 546 aaPredicted RBP10.31□□□□□ -0.76
SF3A3P1-201ENST00000446317 AMER1Q5JTC6 1135 aaPredicted RBP10.31□□□□□ -0.76
SF3A3P1-201ENST00000446317 MORC1Q86VD1 984 aa10.31□□□□□ -0.76
SF3A3P1-201ENST00000446317 ZNF692Q9BU19 519 aaPredicted RBP10.31□□□□□ -0.76
SF3A3P1-201ENST00000446317 CGNL1Q0VF96 1302 aa10.31□□□□□ -0.76
SF3A3P1-201ENST00000446317 PHLPP1O60346 1717 aa10.31□□□□□ -0.76
SF3A3P1-201ENST00000446317 PIK3C2AO00443 1686 aa10.3□□□□□ -0.76
SF3A3P1-201ENST00000446317 SENP3-EIF4A1A0A087X0R7 540 aa10.3□□□□□ -0.76
SF3A3P1-201ENST00000446317 ANP32CO43423 234 aa10.3□□□□□ -0.76
SF3A3P1-201ENST00000446317 HAP1P54257 671 aaPredicted RBP10.3□□□□□ -0.76
SF3A3P1-201ENST00000446317 RRS1Q15050 365 aaKnown RBP10.3□□□□□ -0.76
SF3A3P1-201ENST00000446317 NHSL1Q5SYE7 1610 aa10.29□□□□□ -0.76
SF3A3P1-201ENST00000446317 ZC3H6P61129 1189 aaKnown RBP10.29□□□□□ -0.76
SF3A3P1-201ENST00000446317 CCDC184Q52MB2 194 aa10.29□□□□□ -0.76
SF3A3P1-201ENST00000446317 TNS3Q68CZ2 1445 aa10.29□□□□□ -0.76
SF3A3P1-201ENST00000446317 SSH2Q76I76 1423 aa10.29□□□□□ -0.76
SF3A3P1-201ENST00000446317 COG3Q96JB2 828 aa10.29□□□□□ -0.76
SF3A3P1-201ENST00000446317 TRPM3Q9HCF6 1732 aaPredicted RBP10.29□□□□□ -0.76
SF3A3P1-201ENST00000446317 KIF20BQ96Q89 1820 aa10.28□□□□□ -0.76
SF3A3P1-201ENST00000446317 SOS2Q07890 1332 aaPredicted RBP10.28□□□□□ -0.76
SF3A3P1-201ENST00000446317 SPATA31A3Q5VYP0 1347 aa10.28□□□□□ -0.76
SF3A3P1-201ENST00000446317 ADAMTS2O95450 1211 aa10.28□□□□□ -0.76
SF3A3P1-201ENST00000446317 CHRNA2Q15822 529 aa10.28□□□□□ -0.76
SF3A3P1-201ENST00000446317 IQSEC2Q5JU85 1478 aa10.27□□□□□ -0.76
SF3A3P1-201ENST00000446317 EMILIN1Q9Y6C2 1016 aa10.27□□□□□ -0.77
SF3A3P1-201ENST00000446317 COL16A1Q07092 1604 aaPredicted RBP10.26□□□□□ -0.77
SF3A3P1-201ENST00000446317 LTV1Q96GA3 475 aaPredicted RBP10.26□□□□□ -0.77
SF3A3P1-201ENST00000446317 PRKRIP1Q9H875 184 aaPredicted RBP10.26□□□□□ -0.77
SF3A3P1-201ENST00000446317 MED1Q15648 1581 aaPredicted RBP10.26□□□□□ -0.77
SF3A3P1-201ENST00000446317 TTC21AQ8NDW8 1320 aa10.26□□□□□ -0.77
SF3A3P1-201ENST00000446317 AHDC1Q5TGY3 1603 aaPredicted RBP10.25□□□□□ -0.77
SF3A3P1-201ENST00000446317 PPP2R1AP30153 589 aa10.25□□□□□ -0.77
SF3A3P1-201ENST00000446317 OVOS2A0A0J9YW53 1432 aa10.25□□□□□ -0.77
SF3A3P1-201ENST00000446317 OVOS2Q6IE36 1432 aa10.25□□□□□ -0.77
SF3A3P1-201ENST00000446317 ALS2Q96Q42 1657 aa10.24□□□□□ -0.77
SF3A3P1-201ENST00000446317 SBNO1A3KN83 1393 aa10.24□□□□□ -0.77
SF3A3P1-201ENST00000446317 PNPLA6Q8IY17 1366 aa10.24□□□□□ -0.77
SF3A3P1-201ENST00000446317 NLRP13Q86W25 1043 aa10.24□□□□□ -0.77
SF3A3P1-201ENST00000446317 LRRC59Q96AG4 307 aaKnown RBP10.24□□□□□ -0.77
SF3A3P1-201ENST00000446317 MARF1Q9Y4F3 1742 aaKnown RBP10.24□□□□□ -0.77
SF3A3P1-201ENST00000446317 GCP02774 474 aa10.23□□□□□ -0.77
SF3A3P1-201ENST00000446317 MTHFSP49914 203 aa10.23□□□□□ -0.77
SF3A3P1-201ENST00000446317 ARHGEF10O15013 1369 aa10.22□□□□□ -0.77
SF3A3P1-201ENST00000446317 PARD3Q8TEW0 1356 aa10.22□□□□□ -0.77
SF3A3P1-201ENST00000446317 AMPHP49418 695 aa10.22□□□□□ -0.77
SF3A3P1-201ENST00000446317 POLKQ9UBT6 870 aa10.22□□□□□ -0.77
SF3A3P1-201ENST00000446317 MAP3K19Q56UN5 1328 aa10.21□□□□□ -0.77
SF3A3P1-201ENST00000446317 PHRF1Q9P1Y6 1649 aaKnown RBP10.21□□□□□ -0.77
SF3A3P1-201ENST00000446317 KIAA0232Q92628 1395 aa10.21□□□□□ -0.77
SF3A3P1-201ENST00000446317 FBXO41Q8TF61 875 aa10.21□□□□□ -0.78
SF3A3P1-201ENST00000446317 MYBBP1AQ9BQG0 1328 aaKnown RBP10.21□□□□□ -0.78
SF3A3P1-201ENST00000446317 USP31Q70CQ4 1352 aa10.2□□□□□ -0.78
SF3A3P1-201ENST00000446317 ANKRD26Q9UPS8 1709 aa10.2□□□□□ -0.78
SF3A3P1-201ENST00000446317 RALBP1Q15311 655 aa10.2□□□□□ -0.78
SF3A3P1-201ENST00000446317 HSP90AB2PQ58FF8 381 aa10.2□□□□□ -0.78
SF3A3P1-201ENST00000446317 MEX3CQ5U5Q3 659 aaKnown RBP10.2□□□□□ -0.78
SF3A3P1-201ENST00000446317 USHBP1Q8N6Y0 703 aa10.2□□□□□ -0.78
SF3A3P1-201ENST00000446317 C8orf37Q96NL8 207 aa10.2□□□□□ -0.78
SF3A3P1-201ENST00000446317 MRS2Q9HD23 443 aa10.2□□□□□ -0.78
SF3A3P1-201ENST00000446317 STRN4Q9NRL3 753 aa10.2□□□□□ -0.78
SF3A3P1-201ENST00000446317 USP19O94966 1318 aa10.2□□□□□ -0.78
SF3A3P1-201ENST00000446317 PEAK1Q9H792 1746 aa10.2□□□□□ -0.78
SF3A3P1-201ENST00000446317 NSD2O96028 1365 aa10.2□□□□□ -0.78
SF3A3P1-201ENST00000446317 PRDM11Q9NQV5 511 aa10.19□□□□□ -0.78
SF3A3P1-201ENST00000446317 AXIN2Q9Y2T1 843 aa10.19□□□□□ -0.78
SF3A3P1-201ENST00000446317 ABCA3Q99758 1704 aa10.19□□□□□ -0.78
SF3A3P1-201ENST00000446317 NFAT5O94916 1531 aa10.19□□□□□ -0.78
SF3A3P1-201ENST00000446317 JCADQ9P266 1359 aa10.19□□□□□ -0.78
SF3A3P1-201ENST00000446317 LRP6O75581 1613 aa10.19□□□□□ -0.78
SF3A3P1-201ENST00000446317 SLIT3O75094 1523 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms