RNA–Protein interactions for RNA: ENST00000445770.3

LINC01949-201, Transcript of long intergenic non-protein coding RNA 1949, humanhuman

TSL 1 (best) BASIC

Gene LINC01949, Length 2,721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01949-201ENST00000445770 EXOSC9Q06265 439 aaKnown RBP12.75□□□□□ -0.37
LINC01949-201ENST00000445770 ELL2O00472 640 aaPredicted RBP12.74□□□□□ -0.37
LINC01949-201ENST00000445770 HDGFL2Q7Z4V5 671 aaPredicted RBP12.74□□□□□ -0.37
LINC01949-201ENST00000445770 A2ML1A8K2U0 1454 aa12.74□□□□□ -0.37
LINC01949-201ENST00000445770 CENPQQ7L2Z9 268 aaPredicted RBP12.73□□□□□ -0.37
LINC01949-201ENST00000445770 TRIM35Q9UPQ4 493 aa12.73□□□□□ -0.37
LINC01949-201ENST00000445770 MAPK8IP3Q9UPT6 1336 aa12.73□□□□□ -0.37
LINC01949-201ENST00000445770 IQSEC2Q5JU85 1478 aa12.73□□□□□ -0.37
LINC01949-201ENST00000445770 TMPOP42166 694 aaKnown RBP12.73□□□□□ -0.37
LINC01949-201ENST00000445770 RIPK4P57078 832 aa12.73□□□□□ -0.37
LINC01949-201ENST00000445770 PHACTR3Q96KR7 559 aa12.73□□□□□ -0.37
LINC01949-201ENST00000445770 PCDHB15Q9Y5E8 787 aa12.73□□□□□ -0.37
LINC01949-201ENST00000445770 ZMYM3Q14202 1370 aa12.73□□□□□ -0.37
LINC01949-201ENST00000445770 PRKAR2BP31323 418 aa12.72□□□□□ -0.37
LINC01949-201ENST00000445770 PLEKHF1Q96S99 279 aa12.72□□□□□ -0.37
LINC01949-201ENST00000445770 DIAPH1O60610 1272 aaKnown RBP12.71□□□□□ -0.37
LINC01949-201ENST00000445770 POLKQ9UBT6 870 aa12.71□□□□□ -0.37
LINC01949-201ENST00000445770 SMC4Q9NTJ3 1288 aa12.71□□□□□ -0.38
LINC01949-201ENST00000445770 ATAD2Q6PL18 1390 aa12.71□□□□□ -0.38
LINC01949-201ENST00000445770 NLRP1Q9C000 1473 aa12.7□□□□□ -0.38
LINC01949-201ENST00000445770 PLEKHG5O94827 1062 aa12.7□□□□□ -0.38
LINC01949-201ENST00000445770 C8orf34Q49A92 452 aa12.7□□□□□ -0.38
LINC01949-201ENST00000445770 RBM33Q96EV2 1170 aaKnown RBP12.7□□□□□ -0.38
LINC01949-201ENST00000445770 DCTN1Q14203 1278 aa12.7□□□□□ -0.38
LINC01949-201ENST00000445770 ARHGEF40Q8TER5 1519 aa12.7□□□□□ -0.38
LINC01949-201ENST00000445770 ZFYVE9O95405 1425 aa12.7□□□□□ -0.38
LINC01949-201ENST00000445770 SEC24BO95487 1268 aa12.69□□□□□ -0.38
LINC01949-201ENST00000445770 LTKP29376 864 aa12.69□□□□□ -0.38
LINC01949-201ENST00000445770 FAM83GA6ND36 823 aa12.69□□□□□ -0.38
LINC01949-201ENST00000445770 SSH1Q8WYL5 1049 aa12.69□□□□□ -0.38
LINC01949-201ENST00000445770 NUDT16Q96DE0 195 aaKnown RBP12.69□□□□□ -0.38
LINC01949-201ENST00000445770 WASLO00401 505 aaPredicted RBP12.68□□□□□ -0.38
LINC01949-201ENST00000445770 PPIP5K1Q6PFW1 1433 aa12.68□□□□□ -0.38
LINC01949-201ENST00000445770 FTSJ3Q8IY81 847 aaKnown RBP12.68□□□□□ -0.38
LINC01949-201ENST00000445770 PRR36Q9H6K5 1346 aa12.67□□□□□ -0.38
LINC01949-201ENST00000445770 MS4A1P11836 297 aa12.67□□□□□ -0.38
LINC01949-201ENST00000445770 PMFBP1Q8TBY8 1022 aa12.67□□□□□ -0.38
LINC01949-201ENST00000445770 WDR63Q8IWG1 891 aa12.67□□□□□ -0.38
LINC01949-201ENST00000445770 MYH16Q9H6N6 1097 aa12.67□□□□□ -0.38
LINC01949-201ENST00000445770 COL3A1P02461 1466 aaPredicted RBP12.66□□□□□ -0.38
LINC01949-201ENST00000445770 TRIM27P14373 513 aa12.66□□□□□ -0.38
LINC01949-201ENST00000445770 AEBP1Q8IUX7 1158 aa12.66□□□□□ -0.38
LINC01949-201ENST00000445770 ITPRIPQ8IWB1 547 aa12.66□□□□□ -0.38
LINC01949-201ENST00000445770 ROBO2Q9HCK4 1378 aa12.66□□□□□ -0.38
LINC01949-201ENST00000445770 NSD2O96028 1365 aa12.66□□□□□ -0.38
LINC01949-201ENST00000445770 TSPYL6Q8N831 410 aa12.65□□□□□ -0.38
LINC01949-201ENST00000445770 DAXXQ9UER7 740 aaPredicted RBP12.65□□□□□ -0.38
LINC01949-201ENST00000445770 NOB1Q9ULX3 412 aaKnown RBP12.65□□□□□ -0.38
LINC01949-201ENST00000445770 PDE3AQ14432 1141 aa12.65□□□□□ -0.38
LINC01949-201ENST00000445770 NUTM2GQ5VZR2 741 aa12.65□□□□□ -0.38
LINC01949-201ENST00000445770 C1orf115Q9H7X2 142 aa12.64□□□□□ -0.39
LINC01949-201ENST00000445770 KRT24Q2M2I5 525 aa12.64□□□□□ -0.39
LINC01949-201ENST00000445770 FAM161AQ3B820 660 aa12.64□□□□□ -0.39
LINC01949-201ENST00000445770 PPP4R3CPQ6ZMV5 832 aa12.64□□□□□ -0.39
LINC01949-201ENST00000445770 RSPH6AQ9H0K4 717 aa12.64□□□□□ -0.39
LINC01949-201ENST00000445770 USP32Q8NFA0 1604 aa12.64□□□□□ -0.39
LINC01949-201ENST00000445770 TNRQ92752 1358 aa12.63□□□□□ -0.39
LINC01949-201ENST00000445770 PUS7Q96PZ0 661 aaKnown RBP12.63□□□□□ -0.39
LINC01949-201ENST00000445770 CPS1P31327 1500 aa12.63□□□□□ -0.39
LINC01949-201ENST00000445770 KIF13AQ9H1H9 1805 aa12.62□□□□□ -0.39
LINC01949-201ENST00000445770 SPATA31D1Q6ZQQ2 1576 aa12.62□□□□□ -0.39
LINC01949-201ENST00000445770 LRRC7Q96NW7 1537 aa12.62□□□□□ -0.39
LINC01949-201ENST00000445770 CCDC27Q2M243 656 aa12.62□□□□□ -0.39
LINC01949-201ENST00000445770 DZIP1LQ8IYY4 767 aaKnown RBP12.62□□□□□ -0.39
LINC01949-201ENST00000445770 TMEM57Q8N5G2 664 aa12.62□□□□□ -0.39
LINC01949-201ENST00000445770 PDZRN3Q9UPQ7 1066 aa12.62□□□□□ -0.39
LINC01949-201ENST00000445770 NRXN3Q9Y4C0 1643 aa12.62□□□□□ -0.39
LINC01949-201ENST00000445770 TRHP20396 242 aaPredicted RBP12.61□□□□□ -0.39
LINC01949-201ENST00000445770 ZKSCAN2Q63HK3 967 aa12.61□□□□□ -0.39
LINC01949-201ENST00000445770 CCDC61Q9Y6R9 512 aa12.61□□□□□ -0.39
LINC01949-201ENST00000445770 KCNA4P22459 653 aa12.61□□□□□ -0.39
LINC01949-201ENST00000445770 DEKP35659 375 aaKnown RBP12.61□□□□□ -0.39
LINC01949-201ENST00000445770 COG3Q96JB2 828 aa12.61□□□□□ -0.39
LINC01949-201ENST00000445770 MVPQ14764 893 aaKnown RBP12.61□□□□□ -0.39
LINC01949-201ENST00000445770 NINLQ9Y2I6 1382 aa12.6□□□□□ -0.39
LINC01949-201ENST00000445770 NEFMP07197 916 aa12.6□□□□□ -0.39
LINC01949-201ENST00000445770 HSP90AB2PQ58FF8 381 aa12.6□□□□□ -0.39
LINC01949-201ENST00000445770 NGEFQ8N5V2 710 aa12.6□□□□□ -0.39
LINC01949-201ENST00000445770 ACEP12821 1306 aa12.59□□□□□ -0.39
LINC01949-201ENST00000445770 IL13P35225 146 aa12.59□□□□□ -0.39
LINC01949-201ENST00000445770 MIS18AQ9NYP9 233 aa12.59□□□□□ -0.39
LINC01949-201ENST00000445770 TMEM2Q9UHN6 1383 aa12.59□□□□□ -0.39
LINC01949-201ENST00000445770 AGLP35573 1532 aa12.59□□□□□ -0.39
LINC01949-201ENST00000445770 MAP2P11137 1827 aaKnown RBP12.59□□□□□ -0.39
LINC01949-201ENST00000445770 SETD1AO15047 1707 aaKnown RBP12.58□□□□□ -0.39
LINC01949-201ENST00000445770 ADGRB2O60241 1585 aa12.58□□□□□ -0.4
LINC01949-201ENST00000445770 PNPLA6Q8IY17 1366 aa12.58□□□□□ -0.4
LINC01949-201ENST00000445770 SULT6B1Q6IMI4 303 aa12.58□□□□□ -0.4
LINC01949-201ENST00000445770 MCM10Q7L590 875 aa12.58□□□□□ -0.4
LINC01949-201ENST00000445770 ATF7IPQ6VMQ6 1270 aa12.58□□□□□ -0.4
LINC01949-201ENST00000445770 FCHSD2O94868 740 aa12.57□□□□□ -0.4
LINC01949-201ENST00000445770 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.57□□□□□ -0.4
LINC01949-201ENST00000445770 MBIPQ9NS73 344 aa12.57□□□□□ -0.4
LINC01949-201ENST00000445770 FOXO3O43524 673 aa12.57□□□□□ -0.4
LINC01949-201ENST00000445770 C8orf58Q8NAV2 365 aa12.57□□□□□ -0.4
LINC01949-201ENST00000445770 SPRYD3Q8NCJ5 442 aa12.57□□□□□ -0.4
LINC01949-201ENST00000445770 AMOTL2Q9Y2J4 779 aa12.56□□□□□ -0.4
LINC01949-201ENST00000445770 CPSF1Q10570 1443 aaKnown RBP12.56□□□□□ -0.4
LINC01949-201ENST00000445770 NFE2L2Q16236 605 aa12.56□□□□□ -0.4
LINC01949-201ENST00000445770 RTL5Q5HYW3 569 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms