RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 HFM1A2PYH4 1435 aa10.89□□□□□ -0.67
BRAFP1-201ENST00000445336 SBNO1A3KN83 1393 aa10.89□□□□□ -0.67
BRAFP1-201ENST00000445336 PRPF38BQ5VTL8 546 aaKnown RBP10.88□□□□□ -0.67
BRAFP1-201ENST00000445336 BCANQ96GW7 911 aa10.88□□□□□ -0.67
BRAFP1-201ENST00000445336 STK32BQ9NY57 414 aa10.88□□□□□ -0.67
BRAFP1-201ENST00000445336 ABHD8Q96I13 439 aa10.87□□□□□ -0.67
BRAFP1-201ENST00000445336 ARHGEF10O15013 1369 aa10.87□□□□□ -0.67
BRAFP1-201ENST00000445336 BARGINQ6ZT62 677 aa10.87□□□□□ -0.67
BRAFP1-201ENST00000445336 TNS3Q68CZ2 1445 aa10.87□□□□□ -0.67
BRAFP1-201ENST00000445336 DDX17Q92841 729 aaKnown RBP10.86□□□□□ -0.67
BRAFP1-201ENST00000445336 TNRC6CQ9HCJ0 1690 aaKnown RBP10.86□□□□□ -0.67
BRAFP1-201ENST00000445336 FAM98CQ17RN3 349 aaKnown RBP10.86□□□□□ -0.67
BRAFP1-201ENST00000445336 ATP7BP35670 1465 aa10.85□□□□□ -0.67
BRAFP1-201ENST00000445336 CTCFP49711 727 aaPredicted RBP10.85□□□□□ -0.67
BRAFP1-201ENST00000445336 ZBTB7AO95365 584 aa10.84□□□□□ -0.67
BRAFP1-201ENST00000445336 CCDC9Q9Y3X0 531 aaKnown RBP10.84□□□□□ -0.67
BRAFP1-201ENST00000445336 CEP162Q5TB80 1403 aa10.83□□□□□ -0.68
BRAFP1-201ENST00000445336 SLC15A2Q16348 729 aa10.82□□□□□ -0.68
BRAFP1-201ENST00000445336 ANO8Q9HCE9 1232 aaPredicted RBP10.82□□□□□ -0.68
BRAFP1-201ENST00000445336 CRYBG1Q9Y4K1 1723 aa10.81□□□□□ -0.68
BRAFP1-201ENST00000445336 ATF5Q9Y2D1 282 aaPredicted RBP10.81□□□□□ -0.68
BRAFP1-201ENST00000445336 POLD1P28340 1107 aa10.8□□□□□ -0.68
BRAFP1-201ENST00000445336 PLEKHG2Q9H7P9 1386 aa10.8□□□□□ -0.68
BRAFP1-201ENST00000445336 CSRNP3Q8WYN3 585 aa10.79□□□□□ -0.68
BRAFP1-201ENST00000445336 OVOS2A0A0G2JMS6 1433 aa10.79□□□□□ -0.68
BRAFP1-201ENST00000445336 OVOS2A0A0J9YW53 1432 aa10.79□□□□□ -0.68
BRAFP1-201ENST00000445336 OVOS2Q6IE36 1432 aa10.79□□□□□ -0.68
BRAFP1-201ENST00000445336 SPATA31A1Q5TZJ5 1347 aa10.79□□□□□ -0.68
BRAFP1-201ENST00000445336 A0A0G2JS52 829 aa10.79□□□□□ -0.68
BRAFP1-201ENST00000445336 MYT1Q01538 1121 aa10.79□□□□□ -0.68
BRAFP1-201ENST00000445336 TSPY4P0CV99 314 aa10.78□□□□□ -0.68
BRAFP1-201ENST00000445336 TSPY10P0CW01 314 aa10.78□□□□□ -0.68
BRAFP1-201ENST00000445336 ADAMTS7Q9UKP4 1686 aa10.78□□□□□ -0.68
BRAFP1-201ENST00000445336 YBX3P16989 372 aaKnown RBP eCLIP10.78□□□□□ -0.68
BRAFP1-201ENST00000445336 FMN2Q9NZ56 1722 aa10.77□□□□□ -0.68
BRAFP1-201ENST00000445336 ORAI2Q96SN7 254 aa10.77□□□□□ -0.69
BRAFP1-201ENST00000445336 THRAP3Q9Y2W1 955 aaKnown RBP10.77□□□□□ -0.69
BRAFP1-201ENST00000445336 VIRMAQ69YN4 1812 aaKnown RBP10.77□□□□□ -0.69
BRAFP1-201ENST00000445336 PSME1Q06323 249 aa10.76□□□□□ -0.69
BRAFP1-201ENST00000445336 BCL11BQ9C0K0 894 aaPredicted RBP10.76□□□□□ -0.69
BRAFP1-201ENST00000445336 SMC1BQ8NDV3 1235 aa10.75□□□□□ -0.69
BRAFP1-201ENST00000445336 CD2APQ9Y5K6 639 aa10.74□□□□□ -0.69
BRAFP1-201ENST00000445336 ALS2Q96Q42 1657 aa10.73□□□□□ -0.69
BRAFP1-201ENST00000445336 TRPM1Q7Z4N2 1603 aa10.73□□□□□ -0.69
BRAFP1-201ENST00000445336 CHGAP10645 457 aaKnown RBP10.73□□□□□ -0.69
BRAFP1-201ENST00000445336 PDE3BQ13370 1112 aa10.73□□□□□ -0.69
BRAFP1-201ENST00000445336 C16orf71Q8IYS4 520 aaPredicted RBP10.73□□□□□ -0.69
BRAFP1-201ENST00000445336 AIDAQ96BJ3 306 aa10.72□□□□□ -0.69
BRAFP1-201ENST00000445336 PKD1L3Q7Z443 1732 aa10.72□□□□□ -0.69
BRAFP1-201ENST00000445336 TRPM3Q9HCF6 1732 aaPredicted RBP10.71□□□□□ -0.69
BRAFP1-201ENST00000445336 WNK3Q9BYP7 1800 aa10.71□□□□□ -0.69
BRAFP1-201ENST00000445336 THSD7BQ9C0I4 1608 aa10.71□□□□□ -0.7
BRAFP1-201ENST00000445336 DLL1O00548 723 aa10.7□□□□□ -0.7
BRAFP1-201ENST00000445336 ATP1B4Q9UN42 357 aaPredicted RBP10.7□□□□□ -0.7
BRAFP1-201ENST00000445336 PIK3C2AO00443 1686 aa10.69□□□□□ -0.7
BRAFP1-201ENST00000445336 NHSQ6T4R5 1651 aa10.69□□□□□ -0.7
BRAFP1-201ENST00000445336 AKAP12Q02952 1782 aa10.69□□□□□ -0.7
BRAFP1-201ENST00000445336 FOXN1O15353 648 aa10.69□□□□□ -0.7
BRAFP1-201ENST00000445336 HMGB2P26583 209 aaKnown RBP10.68□□□□□ -0.7
BRAFP1-201ENST00000445336 HAP1P54257 671 aaPredicted RBP10.68□□□□□ -0.7
BRAFP1-201ENST00000445336 PELP1Q8IZL8 1130 aaKnown RBP10.68□□□□□ -0.7
BRAFP1-201ENST00000445336 NRXN1Q9ULB1 1477 aa10.68□□□□□ -0.7
BRAFP1-201ENST00000445336 ANKRD30BQ9BXX2 1392 aa10.68□□□□□ -0.7
BRAFP1-201ENST00000445336 KNDC1Q76NI1 1749 aa10.68□□□□□ -0.7
BRAFP1-201ENST00000445336 BTG4Q9NY30 223 aa10.67□□□□□ -0.7
BRAFP1-201ENST00000445336 LRRC37A3O60309 1634 aa10.67□□□□□ -0.7
BRAFP1-201ENST00000445336 METP08581 1390 aa10.66□□□□□ -0.7
BRAFP1-201ENST00000445336 SUPT5HO00267 1087 aaKnown RBP10.66□□□□□ -0.7
BRAFP1-201ENST00000445336 PDGFDQ9GZP0 370 aaPredicted RBP10.66□□□□□ -0.7
BRAFP1-201ENST00000445336 ZNF644Q9H582 1327 aaPredicted RBP10.66□□□□□ -0.7
BRAFP1-201ENST00000445336 PROM2Q8N271 834 aa10.65□□□□□ -0.7
BRAFP1-201ENST00000445336 ZC3H4Q9UPT8 1303 aaKnown RBP10.65□□□□□ -0.7
BRAFP1-201ENST00000445336 FAM182BQ5T319 152 aa10.65□□□□□ -0.7
BRAFP1-201ENST00000445336 TXNRD1Q16881 649 aa10.64□□□□□ -0.71
BRAFP1-201ENST00000445336 CLTCL1P53675 1640 aa10.64□□□□□ -0.71
BRAFP1-201ENST00000445336 ESCO1Q5FWF5 840 aa10.64□□□□□ -0.71
BRAFP1-201ENST00000445336 KRT28Q7Z3Y7 464 aa10.64□□□□□ -0.71
BRAFP1-201ENST00000445336 NLGN2Q8NFZ4 835 aa10.64□□□□□ -0.71
BRAFP1-201ENST00000445336 KDM2BQ8NHM5 1336 aa10.63□□□□□ -0.71
BRAFP1-201ENST00000445336 TECPR2O15040 1411 aa10.63□□□□□ -0.71
BRAFP1-201ENST00000445336 CREBZFQ9NS37 354 aa10.62□□□□□ -0.71
BRAFP1-201ENST00000445336 LMO7Q8WWI1 1683 aa10.62□□□□□ -0.71
BRAFP1-201ENST00000445336 PHRF1Q9P1Y6 1649 aaKnown RBP10.62□□□□□ -0.71
BRAFP1-201ENST00000445336 SSH2Q76I76 1423 aa10.62□□□□□ -0.71
BRAFP1-201ENST00000445336 HSPA8P11142 646 aaKnown RBP10.62□□□□□ -0.71
BRAFP1-201ENST00000445336 MNX1P50219 401 aaPredicted RBP10.62□□□□□ -0.71
BRAFP1-201ENST00000445336 ZNF526Q8TF50 670 aaPredicted RBP10.62□□□□□ -0.71
BRAFP1-201ENST00000445336 TUBGCP6Q96RT7 1819 aa10.61□□□□□ -0.71
BRAFP1-201ENST00000445336 WBP1LQ9NX94 342 aa10.61□□□□□ -0.71
BRAFP1-201ENST00000445336 CNTNAP1P78357 1384 aa10.61□□□□□ -0.71
BRAFP1-201ENST00000445336 PMFBP1Q8TBY8 1022 aa10.61□□□□□ -0.71
BRAFP1-201ENST00000445336 IFT172Q9UG01 1749 aa10.6□□□□□ -0.71
BRAFP1-201ENST00000445336 CCDC85CA6NKD9 419 aa10.6□□□□□ -0.71
BRAFP1-201ENST00000445336 CHIC1Q5VXU3 224 aa10.6□□□□□ -0.71
BRAFP1-201ENST00000445336 CEP350Q5VT06 3117 aa10.6□□□□□ -0.71
BRAFP1-201ENST00000445336 NAIPQ13075 1403 aa10.6□□□□□ -0.71
BRAFP1-201ENST00000445336 QRICH2Q9H0J4 1663 aa10.6□□□□□ -0.71
BRAFP1-201ENST00000445336 ROBO2Q9HCK4 1378 aa10.59□□□□□ -0.71
BRAFP1-201ENST00000445336 FOXO3O43524 673 aa10.59□□□□□ -0.71
BRAFP1-201ENST00000445336 TCP11L2Q8N4U5 519 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms