RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 IQSEC2Q5JU85 1478 aa17.9■□□□□ 0.46
RBM39-216ENST00000444878 ROBO2Q9HCK4 1378 aa17.89■□□□□ 0.45
RBM39-216ENST00000444878 RRP7AQ9Y3A4 280 aaKnown RBP17.89■□□□□ 0.45
RBM39-216ENST00000444878 CCDC61Q9Y6R9 512 aa17.89■□□□□ 0.45
RBM39-216ENST00000444878 MAP2P11137 1827 aaKnown RBP17.89■□□□□ 0.45
RBM39-216ENST00000444878 SLIT1O75093 1534 aa17.89■□□□□ 0.45
RBM39-216ENST00000444878 DMRT2Q9Y5R5 561 aa17.89■□□□□ 0.45
RBM39-216ENST00000444878 CPSF1Q10570 1443 aaKnown RBP17.88■□□□□ 0.45
RBM39-216ENST00000444878 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.88■□□□□ 0.45
RBM39-216ENST00000444878 COL3A1P02461 1466 aaPredicted RBP17.88■□□□□ 0.45
RBM39-216ENST00000444878 EDC4Q6P2E9 1401 aaKnown RBP17.88■□□□□ 0.45
RBM39-216ENST00000444878 ITSN1Q15811 1721 aa17.88■□□□□ 0.45
RBM39-216ENST00000444878 U2SURPO15042 1029 aaKnown RBP17.87■□□□□ 0.45
RBM39-216ENST00000444878 ARHGAP23Q9P227 1491 aa17.87■□□□□ 0.45
RBM39-216ENST00000444878 THEMISQ8N1K5 641 aaPredicted RBP17.87■□□□□ 0.45
RBM39-216ENST00000444878 SLC26A8Q96RN1 970 aa17.87■□□□□ 0.45
RBM39-216ENST00000444878 CDC42BPGQ6DT37 1551 aa17.86■□□□□ 0.45
RBM39-216ENST00000444878 MON2Q7Z3U7 1717 aa17.86■□□□□ 0.45
RBM39-216ENST00000444878 EIF5BO60841 1220 aaKnown RBP17.86■□□□□ 0.45
RBM39-216ENST00000444878 CRBNQ96SW2 442 aa17.86■□□□□ 0.45
RBM39-216ENST00000444878 AKAP12Q02952 1782 aa17.86■□□□□ 0.45
RBM39-216ENST00000444878 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.85■□□□□ 0.45
RBM39-216ENST00000444878 CCDC27Q2M243 656 aa17.85■□□□□ 0.45
RBM39-216ENST00000444878 PODXL2Q9NZ53 605 aa17.85■□□□□ 0.45
RBM39-216ENST00000444878 ADGRB2O60241 1585 aa17.85■□□□□ 0.45
RBM39-216ENST00000444878 DIAPH1O60610 1272 aaKnown RBP17.84■□□□□ 0.45
RBM39-216ENST00000444878 WDR63Q8IWG1 891 aa17.84■□□□□ 0.45
RBM39-216ENST00000444878 NCKAP5LQ9HCH0 1330 aa17.84■□□□□ 0.45
RBM39-216ENST00000444878 PNPLA6Q8IY17 1366 aa17.84■□□□□ 0.45
RBM39-216ENST00000444878 C20orf194Q5TEA3 1177 aa17.83■□□□□ 0.45
RBM39-216ENST00000444878 TBX22Q9Y458 520 aa17.83■□□□□ 0.44
RBM39-216ENST00000444878 PRR36Q9H6K5 1346 aa17.82■□□□□ 0.44
RBM39-216ENST00000444878 ZNF692Q9BU19 519 aaPredicted RBP17.82■□□□□ 0.44
RBM39-216ENST00000444878 PTPRUQ92729 1446 aa17.82■□□□□ 0.44
RBM39-216ENST00000444878 PPM1GO15355 546 aaPredicted RBP17.81■□□□□ 0.44
RBM39-216ENST00000444878 NME9Q86XW9 330 aa17.81■□□□□ 0.44
RBM39-216ENST00000444878 POLKQ9UBT6 870 aa17.81■□□□□ 0.44
RBM39-216ENST00000444878 MAPK8IP3Q9UPT6 1336 aa17.81■□□□□ 0.44
RBM39-216ENST00000444878 AMOTL2Q9Y2J4 779 aa17.81■□□□□ 0.44
RBM39-216ENST00000444878 PLEKHF1Q96S99 279 aa17.8■□□□□ 0.44
RBM39-216ENST00000444878 PNNQ9H307 717 aaKnown RBP17.8■□□□□ 0.44
RBM39-216ENST00000444878 DIP2AQ14689 1571 aa17.8■□□□□ 0.44
RBM39-216ENST00000444878 FBLN1P23142 703 aa17.8■□□□□ 0.44
RBM39-216ENST00000444878 RIMS1Q86UR5 1692 aaKnown RBP17.79■□□□□ 0.44
RBM39-216ENST00000444878 BCAR3O75815 825 aa17.79■□□□□ 0.44
RBM39-216ENST00000444878 COG3Q96JB2 828 aa17.79■□□□□ 0.44
RBM39-216ENST00000444878 TOPAZ1Q8N9V7 1692 aa17.78■□□□□ 0.44
RBM39-216ENST00000444878 CEP170BQ9Y4F5 1589 aaPredicted RBP17.77■□□□□ 0.44
RBM39-216ENST00000444878 TMPOP42166 694 aaKnown RBP17.77■□□□□ 0.44
RBM39-216ENST00000444878 NUTM2FA1L443 756 aa17.77■□□□□ 0.43
RBM39-216ENST00000444878 MYH16Q9H6N6 1097 aa17.77■□□□□ 0.43
RBM39-216ENST00000444878 ZRANB1Q9UGI0 708 aa17.77■□□□□ 0.43
RBM39-216ENST00000444878 PTCH1Q13635 1447 aa17.76■□□□□ 0.43
RBM39-216ENST00000444878 AATKQ6ZMQ8 1374 aa17.76■□□□□ 0.43
RBM39-216ENST00000444878 PLEKHG3A1L390 1219 aa17.75■□□□□ 0.43
RBM39-216ENST00000444878 FCHSD2O94868 740 aa17.75■□□□□ 0.43
RBM39-216ENST00000444878 ACEP12821 1306 aa17.75■□□□□ 0.43
RBM39-216ENST00000444878 EMILIN1Q9Y6C2 1016 aa17.75■□□□□ 0.43
RBM39-216ENST00000444878 CDK12Q9NYV4 1490 aaPredicted RBP17.74■□□□□ 0.43
RBM39-216ENST00000444878 SETD1BQ9UPS6 1966 aaKnown RBP17.73■□□□□ 0.43
RBM39-216ENST00000444878 NEFMP07197 916 aa17.73■□□□□ 0.43
RBM39-216ENST00000444878 NRKQ7Z2Y5 1582 aa17.73■□□□□ 0.43
RBM39-216ENST00000444878 LRRC7Q96NW7 1537 aa17.73■□□□□ 0.43
RBM39-216ENST00000444878 RGPD8O14715 1765 aaPredicted RBP17.73■□□□□ 0.43
RBM39-216ENST00000444878 CANXP27824 592 aaKnown RBP17.72■□□□□ 0.43
RBM39-216ENST00000444878 RIPK4P57078 832 aa17.72■□□□□ 0.43
RBM39-216ENST00000444878 TRIM35Q9UPQ4 493 aa17.72■□□□□ 0.43
RBM39-216ENST00000444878 XRN1Q8IZH2 1706 aaKnown RBP17.72■□□□□ 0.43
RBM39-216ENST00000444878 TTC21BQ7Z4L5 1316 aa17.72■□□□□ 0.43
RBM39-216ENST00000444878 RARSP54136 660 aaKnown RBP17.71■□□□□ 0.43
RBM39-216ENST00000444878 PRKAR2BP31323 418 aa17.71■□□□□ 0.42
RBM39-216ENST00000444878 PDE3AQ14432 1141 aa17.71■□□□□ 0.42
RBM39-216ENST00000444878 RRS1Q15050 365 aaKnown RBP17.71■□□□□ 0.42
RBM39-216ENST00000444878 RSPH6AQ9H0K4 717 aa17.71■□□□□ 0.42
RBM39-216ENST00000444878 USP6P35125 1406 aa17.71■□□□□ 0.42
RBM39-216ENST00000444878 IL13P35225 146 aa17.69■□□□□ 0.42
RBM39-216ENST00000444878 PLCB2Q00722 1185 aa17.69■□□□□ 0.42
RBM39-216ENST00000444878 PIK3R4Q99570 1358 aa17.69■□□□□ 0.42
RBM39-216ENST00000444878 FANCIQ9NVI1 1328 aa17.68■□□□□ 0.42
RBM39-216ENST00000444878 ADAMTSL3P82987 1691 aa17.68■□□□□ 0.42
RBM39-216ENST00000444878 TCERG1O14776 1098 aaKnown RBP17.68■□□□□ 0.42
RBM39-216ENST00000444878 HMOX1P09601 288 aa17.68■□□□□ 0.42
RBM39-216ENST00000444878 FRAT1Q92837 279 aaPredicted RBP17.68■□□□□ 0.42
RBM39-216ENST00000444878 ZNF142P52746 1687 aaPredicted RBP17.68■□□□□ 0.42
RBM39-216ENST00000444878 IL16Q14005 1332 aa17.68■□□□□ 0.42
RBM39-216ENST00000444878 KCNA6P17658 529 aa17.68■□□□□ 0.42
RBM39-216ENST00000444878 ANKLE2Q86XL3 938 aa17.67■□□□□ 0.42
RBM39-216ENST00000444878 PMFBP1Q8TBY8 1022 aa17.67■□□□□ 0.42
RBM39-216ENST00000444878 TSR2Q969E8 191 aaKnown RBP17.67■□□□□ 0.42
RBM39-216ENST00000444878 CT47B1P0C2W7 299 aaPredicted RBP17.66■□□□□ 0.42
RBM39-216ENST00000444878 OVOS2A0A0J9YW53 1432 aa17.66■□□□□ 0.42
RBM39-216ENST00000444878 OVOS2Q6IE36 1432 aa17.66■□□□□ 0.42
RBM39-216ENST00000444878 CENPQQ7L2Z9 268 aaPredicted RBP17.66■□□□□ 0.42
RBM39-216ENST00000444878 KDM2BQ8NHM5 1336 aa17.66■□□□□ 0.42
RBM39-216ENST00000444878 NALCNQ8IZF0 1738 aa17.65■□□□□ 0.42
RBM39-216ENST00000444878 NGDNQ8NEJ9 315 aaKnown RBP17.65■□□□□ 0.42
RBM39-216ENST00000444878 CHD2O14647 1828 aaKnown RBP17.65■□□□□ 0.42
RBM39-216ENST00000444878 BCL2L13Q9BXK5 485 aa17.65■□□□□ 0.42
RBM39-216ENST00000444878 EXOSC9Q06265 439 aaKnown RBP17.64■□□□□ 0.41
RBM39-216ENST00000444878 PANK1Q8TE04 598 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms