RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 AMOTL2Q9Y2J4 779 aa24.85■■□□□ 1.57
SEMA3D-202ENST00000444867 SLFN5Q08AF3 891 aa24.83■■□□□ 1.57
SEMA3D-202ENST00000444867 DUSP27Q5VZP5 1158 aa24.83■■□□□ 1.56
SEMA3D-202ENST00000444867 TRMT2AQ8IZ69 625 aaKnown RBP24.82■■□□□ 1.56
SEMA3D-202ENST00000444867 PRR36Q9H6K5 1346 aa24.82■■□□□ 1.56
SEMA3D-202ENST00000444867 PNPLA6Q8IY17 1366 aa24.82■■□□□ 1.56
SEMA3D-202ENST00000444867 NRKQ7Z2Y5 1582 aa24.81■■□□□ 1.56
SEMA3D-202ENST00000444867 MAP2P11137 1827 aaKnown RBP24.8■■□□□ 1.56
SEMA3D-202ENST00000444867 E9PSI1 815 aa24.79■■□□□ 1.56
SEMA3D-202ENST00000444867 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.79■■□□□ 1.56
SEMA3D-202ENST00000444867 PLEKHG3A1L390 1219 aa24.78■■□□□ 1.56
SEMA3D-202ENST00000444867 AATKQ6ZMQ8 1374 aa24.77■■□□□ 1.56
SEMA3D-202ENST00000444867 CHD2O14647 1828 aaKnown RBP24.77■■□□□ 1.56
SEMA3D-202ENST00000444867 U2AF1L5P0DN76 240 aaPredicted RBP24.76■■□□□ 1.55
SEMA3D-202ENST00000444867 U2AF1Q01081 240 aaKnown RBP eCLIP24.76■■□□□ 1.55
SEMA3D-202ENST00000444867 CCDC27Q2M243 656 aa24.76■■□□□ 1.55
SEMA3D-202ENST00000444867 ANKLE2Q86XL3 938 aa24.76■■□□□ 1.55
SEMA3D-202ENST00000444867 NKTRP30414 1462 aaKnown RBP24.76■■□□□ 1.55
SEMA3D-202ENST00000444867 TCP11L2Q8N4U5 519 aa24.75■■□□□ 1.55
SEMA3D-202ENST00000444867 PHF23Q9BUL5 403 aaPredicted RBP24.75■■□□□ 1.55
SEMA3D-202ENST00000444867 WWC1Q8IX03 1113 aa24.74■■□□□ 1.55
SEMA3D-202ENST00000444867 DIAPH1O60610 1272 aaKnown RBP24.73■■□□□ 1.55
SEMA3D-202ENST00000444867 NCKAP5LQ9HCH0 1330 aa24.73■■□□□ 1.55
SEMA3D-202ENST00000444867 PNNQ9H307 717 aaKnown RBP24.72■■□□□ 1.55
SEMA3D-202ENST00000444867 LMTK3Q96Q04 1460 aa24.72■■□□□ 1.55
SEMA3D-202ENST00000444867 NME9Q86XW9 330 aa24.72■■□□□ 1.55
SEMA3D-202ENST00000444867 WDR63Q8IWG1 891 aa24.72■■□□□ 1.55
SEMA3D-202ENST00000444867 COG3Q96JB2 828 aa24.72■■□□□ 1.55
SEMA3D-202ENST00000444867 CDK12Q9NYV4 1490 aaPredicted RBP24.71■■□□□ 1.55
SEMA3D-202ENST00000444867 ANKARQ7Z5J8 1434 aa24.71■■□□□ 1.55
SEMA3D-202ENST00000444867 POLKQ9UBT6 870 aa24.71■■□□□ 1.55
SEMA3D-202ENST00000444867 FMN2Q9NZ56 1722 aa24.71■■□□□ 1.55
SEMA3D-202ENST00000444867 USP6P35125 1406 aa24.7■■□□□ 1.54
SEMA3D-202ENST00000444867 ACEP12821 1306 aa24.7■■□□□ 1.54
SEMA3D-202ENST00000444867 B4GALNT3Q6L9W6 998 aa24.69■■□□□ 1.54
SEMA3D-202ENST00000444867 U2SURPO15042 1029 aaKnown RBP24.68■■□□□ 1.54
SEMA3D-202ENST00000444867 NALCNQ8IZF0 1738 aa24.68■■□□□ 1.54
SEMA3D-202ENST00000444867 RGPD8O14715 1765 aaPredicted RBP24.68■■□□□ 1.54
SEMA3D-202ENST00000444867 TSHZ2Q9NRE2 1034 aa24.68■■□□□ 1.54
SEMA3D-202ENST00000444867 TTC21BQ7Z4L5 1316 aa24.67■■□□□ 1.54
SEMA3D-202ENST00000444867 PLEKHF1Q96S99 279 aa24.67■■□□□ 1.54
SEMA3D-202ENST00000444867 SPINK5Q9NQ38 1064 aaPredicted RBP24.67■■□□□ 1.54
SEMA3D-202ENST00000444867 KCNA6P17658 529 aa24.66■■□□□ 1.54
SEMA3D-202ENST00000444867 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.66■■□□□ 1.54
SEMA3D-202ENST00000444867 SSH2Q76I76 1423 aa24.66■■□□□ 1.54
SEMA3D-202ENST00000444867 OVOS2A0A0J9YW53 1432 aa24.65■■□□□ 1.54
SEMA3D-202ENST00000444867 OVOS2Q6IE36 1432 aa24.65■■□□□ 1.54
SEMA3D-202ENST00000444867 HSPA2P54652 639 aa24.64■■□□□ 1.54
SEMA3D-202ENST00000444867 CCDC136Q96JN2 1154 aa24.64■■□□□ 1.54
SEMA3D-202ENST00000444867 MAPK8IP3Q9UPT6 1336 aa24.64■■□□□ 1.54
SEMA3D-202ENST00000444867 TTC21AQ8NDW8 1320 aa24.64■■□□□ 1.53
SEMA3D-202ENST00000444867 FCHSD2O94868 740 aa24.63■■□□□ 1.53
SEMA3D-202ENST00000444867 RRP7AQ9Y3A4 280 aaKnown RBP24.63■■□□□ 1.53
SEMA3D-202ENST00000444867 DMRT2Q9Y5R5 561 aa24.63■■□□□ 1.53
SEMA3D-202ENST00000444867 NPHP4O75161 1426 aaPredicted RBP24.62■■□□□ 1.53
SEMA3D-202ENST00000444867 NEUROD2Q15784 382 aa24.61■■□□□ 1.53
SEMA3D-202ENST00000444867 EXOC6Q8TAG9 804 aa24.61■■□□□ 1.53
SEMA3D-202ENST00000444867 ZRANB1Q9UGI0 708 aa24.61■■□□□ 1.53
SEMA3D-202ENST00000444867 LRRC7Q96NW7 1537 aa24.61■■□□□ 1.53
SEMA3D-202ENST00000444867 NUTM2FA1L443 756 aa24.59■■□□□ 1.53
SEMA3D-202ENST00000444867 TMPOP42166 694 aaKnown RBP24.59■■□□□ 1.53
SEMA3D-202ENST00000444867 EMILIN1Q9Y6C2 1016 aa24.59■■□□□ 1.53
SEMA3D-202ENST00000444867 USP31Q70CQ4 1352 aa24.58■■□□□ 1.53
SEMA3D-202ENST00000444867 MYH16Q9H6N6 1097 aa24.58■■□□□ 1.53
SEMA3D-202ENST00000444867 PPM1GO15355 546 aaPredicted RBP24.57■■□□□ 1.52
SEMA3D-202ENST00000444867 PLIN1O60240 522 aa24.57■■□□□ 1.52
SEMA3D-202ENST00000444867 IL13P35225 146 aa24.57■■□□□ 1.52
SEMA3D-202ENST00000444867 USP54Q70EL1 1684 aa24.56■■□□□ 1.52
SEMA3D-202ENST00000444867 NEFMP07197 916 aa24.56■■□□□ 1.52
SEMA3D-202ENST00000444867 NWD1Q149M9 1564 aa24.56■■□□□ 1.52
SEMA3D-202ENST00000444867 IL16Q14005 1332 aa24.55■■□□□ 1.52
SEMA3D-202ENST00000444867 FBLN1P23142 703 aa24.55■■□□□ 1.52
SEMA3D-202ENST00000444867 NGDNQ8NEJ9 315 aaKnown RBP24.55■■□□□ 1.52
SEMA3D-202ENST00000444867 RSPH6AQ9H0K4 717 aa24.55■■□□□ 1.52
SEMA3D-202ENST00000444867 ADGRL3Q9HAR2 1447 aa24.53■■□□□ 1.52
SEMA3D-202ENST00000444867 PMFBP1Q8TBY8 1022 aa24.53■■□□□ 1.52
SEMA3D-202ENST00000444867 CRBNQ96SW2 442 aa24.53■■□□□ 1.52
SEMA3D-202ENST00000444867 PIK3C2AO00443 1686 aa24.52■■□□□ 1.52
SEMA3D-202ENST00000444867 RRS1Q15050 365 aaKnown RBP24.51■■□□□ 1.51
SEMA3D-202ENST00000444867 TRIM35Q9UPQ4 493 aa24.51■■□□□ 1.51
SEMA3D-202ENST00000444867 CT47B1P0C2W7 299 aaPredicted RBP24.5■■□□□ 1.51
SEMA3D-202ENST00000444867 PRKAR2BP31323 418 aa24.5■■□□□ 1.51
SEMA3D-202ENST00000444867 PEAK1Q9H792 1746 aa24.49■■□□□ 1.51
SEMA3D-202ENST00000444867 RIPK4P57078 832 aa24.49■■□□□ 1.51
SEMA3D-202ENST00000444867 STRCQ7RTU9 1775 aa24.48■■□□□ 1.51
SEMA3D-202ENST00000444867 RGPD1P0DJD0 1748 aa24.46■■□□□ 1.51
SEMA3D-202ENST00000444867 NFE2L2Q16236 605 aa24.46■■□□□ 1.51
SEMA3D-202ENST00000444867 C20orf194Q5TEA3 1177 aa24.46■■□□□ 1.51
SEMA3D-202ENST00000444867 MARF1Q9Y4F3 1742 aaKnown RBP24.46■■□□□ 1.51
SEMA3D-202ENST00000444867 BCAR3O75815 825 aa24.45■■□□□ 1.5
SEMA3D-202ENST00000444867 PDE3AQ14432 1141 aa24.44■■□□□ 1.5
SEMA3D-202ENST00000444867 DLG5Q8TDM6 1919 aa24.44■■□□□ 1.5
SEMA3D-202ENST00000444867 RARSP54136 660 aaKnown RBP24.43■■□□□ 1.5
SEMA3D-202ENST00000444867 FANCIQ9NVI1 1328 aa24.43■■□□□ 1.5
SEMA3D-202ENST00000444867 HMOX1P09601 288 aa24.43■■□□□ 1.5
SEMA3D-202ENST00000444867 CALD1Q05682 793 aaKnown RBP24.43■■□□□ 1.5
SEMA3D-202ENST00000444867 PHF8Q9UPP1 1060 aa24.42■■□□□ 1.5
SEMA3D-202ENST00000444867 SBNO1A3KN83 1393 aa24.42■■□□□ 1.5
SEMA3D-202ENST00000444867 KIF24Q5T7B8 1368 aa24.42■■□□□ 1.5
SEMA3D-202ENST00000444867 EIF4A2Q14240 407 aaKnown RBP24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms