RNA–Protein interactions for RNA: ENST00000444772.3

SKIDA1-201, Transcript of SKI/DACH domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SKIDA1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-201ENST00000444772 TBC1D32Q96NH3 1257 aa27.64■■■□□ 2.01
SKIDA1-201ENST00000444772 TMEM131LA2VDJ0 1609 aa27.63■■■□□ 2.01
SKIDA1-201ENST00000444772 RICTORQ6R327 1708 aa27.62■■■□□ 2.01
SKIDA1-201ENST00000444772 U2SURPO15042 1029 aaKnown RBP27.61■■■□□ 2.01
SKIDA1-201ENST00000444772 SMC4Q9NTJ3 1288 aa27.61■■■□□ 2.01
SKIDA1-201ENST00000444772 DDX19BQ9UMR2 479 aa27.61■■■□□ 2.01
SKIDA1-201ENST00000444772 TRIM35Q9UPQ4 493 aa27.61■■■□□ 2.01
SKIDA1-201ENST00000444772 HDAC1Q13547 482 aaPredicted RBP27.61■■■□□ 2.01
SKIDA1-201ENST00000444772 FYB1O15117 783 aa27.6■■■□□ 2.01
SKIDA1-201ENST00000444772 SAFB2Q14151 953 aaKnown RBP eCLIP27.6■■■□□ 2.01
SKIDA1-201ENST00000444772 GGNBP2Q9H3C7 697 aa27.6■■■□□ 2.01
SKIDA1-201ENST00000444772 PREX1Q8TCU6 1659 aa27.6■■■□□ 2.01
SKIDA1-201ENST00000444772 IL27Q8NEV9 243 aa27.6■■■□□ 2.01
SKIDA1-201ENST00000444772 EXOSC9Q06265 439 aaKnown RBP27.59■■■□□ 2.01
SKIDA1-201ENST00000444772 YTHDC2Q9H6S0 1430 aaKnown RBP27.59■■■□□ 2.01
SKIDA1-201ENST00000444772 CD163L1Q9NR16 1453 aa27.59■■■□□ 2.01
SKIDA1-201ENST00000444772 PNPLA6Q8IY17 1366 aa27.59■■■□□ 2.01
SKIDA1-201ENST00000444772 STK26Q9P289 416 aa27.59■■■□□ 2.01
SKIDA1-201ENST00000444772 TSR2Q969E8 191 aaKnown RBP27.58■■■□□ 2.01
SKIDA1-201ENST00000444772 HDGFL2Q7Z4V5 671 aaPredicted RBP27.57■■■□□ 2
SKIDA1-201ENST00000444772 ATF7IPQ6VMQ6 1270 aa27.57■■■□□ 2
SKIDA1-201ENST00000444772 MYO5BQ9ULV0 1848 aa27.57■■■□□ 2
SKIDA1-201ENST00000444772 TRIM27P14373 513 aa27.56■■■□□ 2
SKIDA1-201ENST00000444772 POGKQ9P215 609 aa27.56■■■□□ 2
SKIDA1-201ENST00000444772 DIAPH1O60610 1272 aaKnown RBP27.55■■■□□ 2
SKIDA1-201ENST00000444772 PRAM1Q96QH2 718 aa27.55■■■□□ 2
SKIDA1-201ENST00000444772 SSH1Q8WYL5 1049 aa27.55■■■□□ 2
SKIDA1-201ENST00000444772 KIF16BQ96L93 1317 aa27.54■■■□□ 2
SKIDA1-201ENST00000444772 IPO8O15397 1037 aaKnown RBP27.54■■■□□ 2
SKIDA1-201ENST00000444772 CDC42BPGQ6DT37 1551 aa27.53■■■□□ 2
SKIDA1-201ENST00000444772 MINK1Q8N4C8 1332 aaPredicted RBP27.53■■■□□ 2
SKIDA1-201ENST00000444772 RIPK4P57078 832 aa27.52■■■□□ 2
SKIDA1-201ENST00000444772 ALDH1L2Q3SY69 923 aa27.51■■□□□ 1.99
SKIDA1-201ENST00000444772 ZNF428Q96B54 188 aa27.51■■□□□ 1.99
SKIDA1-201ENST00000444772 ANTXR1Q9H6X2 564 aa27.51■■□□□ 1.99
SKIDA1-201ENST00000444772 ARHGEF40Q8TER5 1519 aa27.51■■□□□ 1.99
SKIDA1-201ENST00000444772 FCHSD2O94868 740 aa27.51■■□□□ 1.99
SKIDA1-201ENST00000444772 FAM69CQ0P6D2 419 aa27.5■■□□□ 1.99
SKIDA1-201ENST00000444772 ITPRIPQ8IWB1 547 aa27.5■■□□□ 1.99
SKIDA1-201ENST00000444772 KIF20BQ96Q89 1820 aa27.5■■□□□ 1.99
SKIDA1-201ENST00000444772 ALKQ9UM73 1620 aa27.5■■□□□ 1.99
SKIDA1-201ENST00000444772 YEATS2Q9ULM3 1422 aa27.5■■□□□ 1.99
SKIDA1-201ENST00000444772 SMC5Q8IY18 1101 aa27.49■■□□□ 1.99
SKIDA1-201ENST00000444772 NOB1Q9ULX3 412 aaKnown RBP27.48■■□□□ 1.99
SKIDA1-201ENST00000444772 TBC1D2Q9BYX2 928 aa27.47■■□□□ 1.99
SKIDA1-201ENST00000444772 CDK19Q9BWU1 502 aa27.47■■□□□ 1.99
SKIDA1-201ENST00000444772 BRPF1P55201 1214 aaPredicted RBP27.46■■□□□ 1.99
SKIDA1-201ENST00000444772 ZBTB40Q9NUA8 1239 aa27.46■■□□□ 1.99
SKIDA1-201ENST00000444772 DLC1Q96QB1 1528 aa27.45■■□□□ 1.99
SKIDA1-201ENST00000444772 PPIP5K1Q6PFW1 1433 aa27.45■■□□□ 1.98
SKIDA1-201ENST00000444772 SLKQ9H2G2 1235 aaPredicted RBP27.44■■□□□ 1.98
SKIDA1-201ENST00000444772 ATP7BP35670 1465 aa27.44■■□□□ 1.98
SKIDA1-201ENST00000444772 BRPF3Q9ULD4 1205 aa27.44■■□□□ 1.98
SKIDA1-201ENST00000444772 TMEM57Q8N5G2 664 aa27.43■■□□□ 1.98
SKIDA1-201ENST00000444772 C22orf23Q9BZE7 217 aa27.42■■□□□ 1.98
SKIDA1-201ENST00000444772 CHMP4BQ9H444 224 aaKnown RBP27.42■■□□□ 1.98
SKIDA1-201ENST00000444772 CABP1Q9NZU7 370 aa27.42■■□□□ 1.98
SKIDA1-201ENST00000444772 FAM135BQ49AJ0 1406 aa27.42■■□□□ 1.98
SKIDA1-201ENST00000444772 CALD1Q05682 793 aaKnown RBP27.41■■□□□ 1.98
SKIDA1-201ENST00000444772 LRRC7Q96NW7 1537 aa27.41■■□□□ 1.98
SKIDA1-201ENST00000444772 DIP2BQ9P265 1576 aa27.4■■□□□ 1.98
SKIDA1-201ENST00000444772 PPP6R1Q9UPN7 881 aa27.4■■□□□ 1.98
SKIDA1-201ENST00000444772 RSPH6AQ9H0K4 717 aa27.39■■□□□ 1.98
SKIDA1-201ENST00000444772 NUCB1Q02818 461 aa27.37■■□□□ 1.97
SKIDA1-201ENST00000444772 STAG3Q9UJ98 1225 aa27.36■■□□□ 1.97
SKIDA1-201ENST00000444772 ARHGAP45Q92619 1136 aa27.36■■□□□ 1.97
SKIDA1-201ENST00000444772 POLKQ9UBT6 870 aa27.35■■□□□ 1.97
SKIDA1-201ENST00000444772 PRKAR2BP31323 418 aa27.35■■□□□ 1.97
SKIDA1-201ENST00000444772 MFAP1P55081 439 aaKnown RBP27.34■■□□□ 1.97
SKIDA1-201ENST00000444772 NFE2L2Q16236 605 aa27.34■■□□□ 1.97
SKIDA1-201ENST00000444772 FBXO31Q5XUX0 539 aaPredicted RBP27.34■■□□□ 1.97
SKIDA1-201ENST00000444772 RTN4Q9NQC3 1192 aaKnown RBP27.34■■□□□ 1.97
SKIDA1-201ENST00000444772 TSPOAP1O95153 1857 aa27.34■■□□□ 1.97
SKIDA1-201ENST00000444772 REREQ9P2R6 1566 aa27.33■■□□□ 1.97
SKIDA1-201ENST00000444772 PIK3R4Q99570 1358 aa27.31■■□□□ 1.96
SKIDA1-201ENST00000444772 L1TD1Q5T7N2 865 aaKnown RBP27.31■■□□□ 1.96
SKIDA1-201ENST00000444772 CHMP5Q9NZZ3 219 aa27.31■■□□□ 1.96
SKIDA1-201ENST00000444772 SENP3Q9H4L4 574 aaPredicted RBP27.31■■□□□ 1.96
SKIDA1-201ENST00000444772 EDC4Q6P2E9 1401 aaKnown RBP27.3■■□□□ 1.96
SKIDA1-201ENST00000444772 AGLP35573 1532 aa27.3■■□□□ 1.96
SKIDA1-201ENST00000444772 GNAI1P63096 354 aa27.3■■□□□ 1.96
SKIDA1-201ENST00000444772 IFT57Q9NWB7 429 aa27.3■■□□□ 1.96
SKIDA1-201ENST00000444772 PTCH1Q13635 1447 aa27.29■■□□□ 1.96
SKIDA1-201ENST00000444772 CHD1LQ86WJ1 897 aa27.29■■□□□ 1.96
SKIDA1-201ENST00000444772 GCC1Q96CN9 775 aa27.29■■□□□ 1.96
SKIDA1-201ENST00000444772 A2ML1A8K2U0 1454 aa27.29■■□□□ 1.96
SKIDA1-201ENST00000444772 CDK12Q9NYV4 1490 aaPredicted RBP27.28■■□□□ 1.96
SKIDA1-201ENST00000444772 RBM25P49756 843 aaKnown RBP27.28■■□□□ 1.96
SKIDA1-201ENST00000444772 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.28■■□□□ 1.96
SKIDA1-201ENST00000444772 AATKQ6ZMQ8 1374 aa27.28■■□□□ 1.96
SKIDA1-201ENST00000444772 CPSF1Q10570 1443 aaKnown RBP27.28■■□□□ 1.96
SKIDA1-201ENST00000444772 HSCBQ8IWL3 235 aa27.27■■□□□ 1.96
SKIDA1-201ENST00000444772 MAP2P11137 1827 aaKnown RBP27.27■■□□□ 1.96
SKIDA1-201ENST00000444772 SETD1AO15047 1707 aaKnown RBP27.27■■□□□ 1.96
SKIDA1-201ENST00000444772 VAMP4O75379 141 aa27.27■■□□□ 1.96
SKIDA1-201ENST00000444772 LMOD3Q0VAK6 560 aa27.26■■□□□ 1.96
SKIDA1-201ENST00000444772 SPATA31D1Q6ZQQ2 1576 aa27.26■■□□□ 1.95
SKIDA1-201ENST00000444772 BMP2KLQ5H9B9 411 aa27.26■■□□□ 1.95
SKIDA1-201ENST00000444772 MRPL50Q8N5N7 158 aaKnown RBP27.26■■□□□ 1.95
SKIDA1-201ENST00000444772 RIMS2Q9UQ26 1411 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms