RNA–Protein interactions for RNA: ENST00000444118.5

CCDC197-202, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,937 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-202ENST00000444118 PNPLA6Q8IY17 1366 aa22.73■■□□□ 1.23
CCDC197-202ENST00000444118 NUDT16Q96DE0 195 aaKnown RBP22.72■■□□□ 1.23
CCDC197-202ENST00000444118 CCDC61Q9Y6R9 512 aa22.72■■□□□ 1.23
CCDC197-202ENST00000444118 RUNDC1Q96C34 613 aa22.72■■□□□ 1.23
CCDC197-202ENST00000444118 LMTK3Q96Q04 1460 aa22.72■■□□□ 1.23
CCDC197-202ENST00000444118 NCBP3Q53F19 620 aaKnown RBP22.7■■□□□ 1.23
CCDC197-202ENST00000444118 PRR36Q9H6K5 1346 aa22.7■■□□□ 1.22
CCDC197-202ENST00000444118 PHF23Q9BUL5 403 aaPredicted RBP22.69■■□□□ 1.22
CCDC197-202ENST00000444118 NKTRP30414 1462 aaKnown RBP22.69■■□□□ 1.22
CCDC197-202ENST00000444118 B4GALNT3Q6L9W6 998 aa22.69■■□□□ 1.22
CCDC197-202ENST00000444118 SLC26A8Q96RN1 970 aa22.69■■□□□ 1.22
CCDC197-202ENST00000444118 E9PSI1 815 aa22.67■■□□□ 1.22
CCDC197-202ENST00000444118 PIK3R4Q99570 1358 aa22.67■■□□□ 1.22
CCDC197-202ENST00000444118 WWC1Q8IX03 1113 aa22.66■■□□□ 1.22
CCDC197-202ENST00000444118 CCDC27Q2M243 656 aa22.65■■□□□ 1.22
CCDC197-202ENST00000444118 SPINK5Q9NQ38 1064 aaPredicted RBP22.65■■□□□ 1.22
CCDC197-202ENST00000444118 NALCNQ8IZF0 1738 aa22.64■■□□□ 1.22
CCDC197-202ENST00000444118 CHD2O14647 1828 aaKnown RBP22.64■■□□□ 1.22
CCDC197-202ENST00000444118 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.64■■□□□ 1.21
CCDC197-202ENST00000444118 TCP11L2Q8N4U5 519 aa22.64■■□□□ 1.21
CCDC197-202ENST00000444118 AMOTL2Q9Y2J4 779 aa22.64■■□□□ 1.21
CCDC197-202ENST00000444118 AATKQ6ZMQ8 1374 aa22.64■■□□□ 1.21
CCDC197-202ENST00000444118 ZNF692Q9BU19 519 aaPredicted RBP22.63■■□□□ 1.21
CCDC197-202ENST00000444118 RGPD8O14715 1765 aaPredicted RBP22.63■■□□□ 1.21
CCDC197-202ENST00000444118 CDK12Q9NYV4 1490 aaPredicted RBP22.63■■□□□ 1.21
CCDC197-202ENST00000444118 NCKAP5LQ9HCH0 1330 aa22.62■■□□□ 1.21
CCDC197-202ENST00000444118 U2AF1L5P0DN76 240 aaPredicted RBP22.62■■□□□ 1.21
CCDC197-202ENST00000444118 U2AF1Q01081 240 aaKnown RBP eCLIP22.62■■□□□ 1.21
CCDC197-202ENST00000444118 DMRT2Q9Y5R5 561 aa22.61■■□□□ 1.21
CCDC197-202ENST00000444118 PLEKHG3A1L390 1219 aa22.6■■□□□ 1.21
CCDC197-202ENST00000444118 POLKQ9UBT6 870 aa22.59■■□□□ 1.21
CCDC197-202ENST00000444118 FMN2Q9NZ56 1722 aa22.59■■□□□ 1.21
CCDC197-202ENST00000444118 CCDC136Q96JN2 1154 aa22.59■■□□□ 1.21
CCDC197-202ENST00000444118 PLEKHF1Q96S99 279 aa22.59■■□□□ 1.21
CCDC197-202ENST00000444118 LRRC7Q96NW7 1537 aa22.58■■□□□ 1.21
CCDC197-202ENST00000444118 NME9Q86XW9 330 aa22.58■■□□□ 1.21
CCDC197-202ENST00000444118 WDR63Q8IWG1 891 aa22.58■■□□□ 1.21
CCDC197-202ENST00000444118 USP6P35125 1406 aa22.58■■□□□ 1.21
CCDC197-202ENST00000444118 DIAPH1O60610 1272 aaKnown RBP22.57■■□□□ 1.2
CCDC197-202ENST00000444118 EXOC6Q8TAG9 804 aa22.57■■□□□ 1.2
CCDC197-202ENST00000444118 OVOS2A0A0J9YW53 1432 aa22.56■■□□□ 1.2
CCDC197-202ENST00000444118 OVOS2Q6IE36 1432 aa22.56■■□□□ 1.2
CCDC197-202ENST00000444118 SSH2Q76I76 1423 aa22.56■■□□□ 1.2
CCDC197-202ENST00000444118 HSPA2P54652 639 aa22.55■■□□□ 1.2
CCDC197-202ENST00000444118 RRP7AQ9Y3A4 280 aaKnown RBP22.55■■□□□ 1.2
CCDC197-202ENST00000444118 ANKARQ7Z5J8 1434 aa22.54■■□□□ 1.2
CCDC197-202ENST00000444118 ACEP12821 1306 aa22.54■■□□□ 1.2
CCDC197-202ENST00000444118 PLIN1O60240 522 aa22.54■■□□□ 1.2
CCDC197-202ENST00000444118 U2SURPO15042 1029 aaKnown RBP22.53■■□□□ 1.2
CCDC197-202ENST00000444118 COG3Q96JB2 828 aa22.53■■□□□ 1.2
CCDC197-202ENST00000444118 TTC21BQ7Z4L5 1316 aa22.52■■□□□ 1.2
CCDC197-202ENST00000444118 NEUROD2Q15784 382 aa22.51■■□□□ 1.19
CCDC197-202ENST00000444118 ANKLE2Q86XL3 938 aa22.51■■□□□ 1.19
CCDC197-202ENST00000444118 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.51■■□□□ 1.19
CCDC197-202ENST00000444118 PNNQ9H307 717 aaKnown RBP22.51■■□□□ 1.19
CCDC197-202ENST00000444118 ZRANB1Q9UGI0 708 aa22.51■■□□□ 1.19
CCDC197-202ENST00000444118 USP54Q70EL1 1684 aa22.51■■□□□ 1.19
CCDC197-202ENST00000444118 KCNA6P17658 529 aa22.5■■□□□ 1.19
CCDC197-202ENST00000444118 STRCQ7RTU9 1775 aa22.5■■□□□ 1.19
CCDC197-202ENST00000444118 FCHSD2O94868 740 aa22.49■■□□□ 1.19
CCDC197-202ENST00000444118 FBLN1P23142 703 aa22.49■■□□□ 1.19
CCDC197-202ENST00000444118 TMPOP42166 694 aaKnown RBP22.49■■□□□ 1.19
CCDC197-202ENST00000444118 EMILIN1Q9Y6C2 1016 aa22.49■■□□□ 1.19
CCDC197-202ENST00000444118 MAPK8IP3Q9UPT6 1336 aa22.49■■□□□ 1.19
CCDC197-202ENST00000444118 PIK3C2AO00443 1686 aa22.48■■□□□ 1.19
CCDC197-202ENST00000444118 CRBNQ96SW2 442 aa22.47■■□□□ 1.19
CCDC197-202ENST00000444118 USP31Q70CQ4 1352 aa22.47■■□□□ 1.19
CCDC197-202ENST00000444118 C20orf194Q5TEA3 1177 aa22.47■■□□□ 1.19
CCDC197-202ENST00000444118 RSPH6AQ9H0K4 717 aa22.47■■□□□ 1.19
CCDC197-202ENST00000444118 PEAK1Q9H792 1746 aa22.46■■□□□ 1.19
CCDC197-202ENST00000444118 TTC21AQ8NDW8 1320 aa22.46■■□□□ 1.19
CCDC197-202ENST00000444118 IL13P35225 146 aa22.45■■□□□ 1.18
CCDC197-202ENST00000444118 MARF1Q9Y4F3 1742 aaKnown RBP22.45■■□□□ 1.18
CCDC197-202ENST00000444118 DLG5Q8TDM6 1919 aa22.45■■□□□ 1.18
CCDC197-202ENST00000444118 NUTM2FA1L443 756 aa22.45■■□□□ 1.18
CCDC197-202ENST00000444118 TRIM35Q9UPQ4 493 aa22.45■■□□□ 1.18
CCDC197-202ENST00000444118 RGPD1P0DJD0 1748 aa22.44■■□□□ 1.18
CCDC197-202ENST00000444118 IL16Q14005 1332 aa22.44■■□□□ 1.18
CCDC197-202ENST00000444118 MYH16Q9H6N6 1097 aa22.44■■□□□ 1.18
CCDC197-202ENST00000444118 NWD1Q149M9 1564 aa22.43■■□□□ 1.18
CCDC197-202ENST00000444118 PPM1GO15355 546 aaPredicted RBP22.43■■□□□ 1.18
CCDC197-202ENST00000444118 NPHP4O75161 1426 aaPredicted RBP22.42■■□□□ 1.18
CCDC197-202ENST00000444118 BCAR3O75815 825 aa22.41■■□□□ 1.18
CCDC197-202ENST00000444118 RBM19Q9Y4C8 960 aaKnown RBP22.41■■□□□ 1.18
CCDC197-202ENST00000444118 RRS1Q15050 365 aaKnown RBP22.41■■□□□ 1.18
CCDC197-202ENST00000444118 PRKAR2BP31323 418 aa22.39■■□□□ 1.18
CCDC197-202ENST00000444118 ADGRL3Q9HAR2 1447 aa22.39■■□□□ 1.17
CCDC197-202ENST00000444118 CT47B1P0C2W7 299 aaPredicted RBP22.39■■□□□ 1.17
CCDC197-202ENST00000444118 BCL11AQ9H165 835 aa22.39■■□□□ 1.17
CCDC197-202ENST00000444118 RARSP54136 660 aaKnown RBP22.38■■□□□ 1.17
CCDC197-202ENST00000444118 FANCIQ9NVI1 1328 aa22.38■■□□□ 1.17
CCDC197-202ENST00000444118 RIPK4P57078 832 aa22.37■■□□□ 1.17
CCDC197-202ENST00000444118 PDE3AQ14432 1141 aa22.37■■□□□ 1.17
CCDC197-202ENST00000444118 PMFBP1Q8TBY8 1022 aa22.37■■□□□ 1.17
CCDC197-202ENST00000444118 NGDNQ8NEJ9 315 aaKnown RBP22.35■■□□□ 1.17
CCDC197-202ENST00000444118 NEFMP07197 916 aa22.35■■□□□ 1.17
CCDC197-202ENST00000444118 HMOX1P09601 288 aa22.33■■□□□ 1.17
CCDC197-202ENST00000444118 NFE2L2Q16236 605 aa22.33■■□□□ 1.17
CCDC197-202ENST00000444118 PHACTR3Q96KR7 559 aa22.32■■□□□ 1.16
CCDC197-202ENST00000444118 KDM2BQ8NHM5 1336 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms