RNA–Protein interactions for RNA: ENST00000442929.1

FAM3A-214, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-214ENST00000442929 SPATA31A3Q5VYP0 1347 aa26.5■■□□□ 1.83
FAM3A-214ENST00000442929 HDGFL2Q7Z4V5 671 aaPredicted RBP26.5■■□□□ 1.83
FAM3A-214ENST00000442929 TERF2IPQ9NYB0 399 aa26.5■■□□□ 1.83
FAM3A-214ENST00000442929 CPSF1Q10570 1443 aaKnown RBP26.48■■□□□ 1.83
FAM3A-214ENST00000442929 PAK3O75914 559 aaPredicted RBP26.47■■□□□ 1.83
FAM3A-214ENST00000442929 ABCA3Q99758 1704 aa26.47■■□□□ 1.83
FAM3A-214ENST00000442929 KTN1Q86UP2 1357 aaKnown RBP26.46■■□□□ 1.83
FAM3A-214ENST00000442929 MARF1Q9Y4F3 1742 aaKnown RBP26.46■■□□□ 1.83
FAM3A-214ENST00000442929 LMOD2Q6P5Q4 547 aa26.44■■□□□ 1.82
FAM3A-214ENST00000442929 ANKRD36BQ8N2N9 1353 aa26.43■■□□□ 1.82
FAM3A-214ENST00000442929 CD163L1Q9NR16 1453 aa26.42■■□□□ 1.82
FAM3A-214ENST00000442929 SLC12A5Q9H2X9 1139 aa26.42■■□□□ 1.82
FAM3A-214ENST00000442929 CRYBG1Q9Y4K1 1723 aa26.42■■□□□ 1.82
FAM3A-214ENST00000442929 TTC21AQ8NDW8 1320 aa26.41■■□□□ 1.82
FAM3A-214ENST00000442929 EDC4Q6P2E9 1401 aaKnown RBP26.41■■□□□ 1.82
FAM3A-214ENST00000442929 A0A1W2PP64 1363 aa26.41■■□□□ 1.82
FAM3A-214ENST00000442929 PIK3C2AO00443 1686 aa26.41■■□□□ 1.82
FAM3A-214ENST00000442929 PHRF1Q9P1Y6 1649 aaKnown RBP26.4■■□□□ 1.82
FAM3A-214ENST00000442929 POLR3GLQ9BT43 218 aa26.4■■□□□ 1.82
FAM3A-214ENST00000442929 USP54Q70EL1 1684 aa26.38■■□□□ 1.81
FAM3A-214ENST00000442929 HAP1P54257 671 aaPredicted RBP26.38■■□□□ 1.81
FAM3A-214ENST00000442929 KIF20BQ96Q89 1820 aa26.37■■□□□ 1.81
FAM3A-214ENST00000442929 MEX3CQ5U5Q3 659 aaKnown RBP26.37■■□□□ 1.81
FAM3A-214ENST00000442929 ABTB2Q8N961 1025 aa26.37■■□□□ 1.81
FAM3A-214ENST00000442929 SSH2Q76I76 1423 aa26.37■■□□□ 1.81
FAM3A-214ENST00000442929 LRP6O75581 1613 aa26.36■■□□□ 1.81
FAM3A-214ENST00000442929 NUTM2BA6NNL0 878 aaPredicted RBP26.35■■□□□ 1.81
FAM3A-214ENST00000442929 NUTM2EB1AL46 878 aaPredicted RBP26.35■■□□□ 1.81
FAM3A-214ENST00000442929 NUTM2AQ8IVF1 878 aaPredicted RBP26.35■■□□□ 1.81
FAM3A-214ENST00000442929 NLRP13Q86W25 1043 aa26.34■■□□□ 1.81
FAM3A-214ENST00000442929 TTC21BQ7Z4L5 1316 aa26.34■■□□□ 1.81
FAM3A-214ENST00000442929 KIF7Q2M1P5 1343 aa26.32■■□□□ 1.8
FAM3A-214ENST00000442929 RGS17Q9UGC6 210 aaPredicted RBP26.31■■□□□ 1.8
FAM3A-214ENST00000442929 CCDC7Q96M83 1385 aa26.29■■□□□ 1.8
FAM3A-214ENST00000442929 NLRP6P59044 892 aa26.28■■□□□ 1.8
FAM3A-214ENST00000442929 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.28■■□□□ 1.8
FAM3A-214ENST00000442929 SLIT3O75094 1523 aa26.28■■□□□ 1.8
FAM3A-214ENST00000442929 COL14A1Q05707 1796 aaKnown RBP26.27■■□□□ 1.8
FAM3A-214ENST00000442929 NWD2Q9ULI1 1742 aa26.26■■□□□ 1.79
FAM3A-214ENST00000442929 PLCH1Q4KWH8 1693 aa26.26■■□□□ 1.79
FAM3A-214ENST00000442929 USP19O94966 1318 aa26.26■■□□□ 1.79
FAM3A-214ENST00000442929 C11orf95C9JLR9 678 aaPredicted RBP26.26■■□□□ 1.79
FAM3A-214ENST00000442929 ANKRD26Q9UPS8 1709 aa26.25■■□□□ 1.79
FAM3A-214ENST00000442929 NSD3Q9BZ95 1437 aa26.25■■□□□ 1.79
FAM3A-214ENST00000442929 USP31Q70CQ4 1352 aa26.24■■□□□ 1.79
FAM3A-214ENST00000442929 PLEKHG5O94827 1062 aa26.24■■□□□ 1.79
FAM3A-214ENST00000442929 ADAMTS2O95450 1211 aa26.24■■□□□ 1.79
FAM3A-214ENST00000442929 NUTM2GQ5VZR2 741 aa26.24■■□□□ 1.79
FAM3A-214ENST00000442929 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.23■■□□□ 1.79
FAM3A-214ENST00000442929 CABLES1Q8TDN4 633 aa26.23■■□□□ 1.79
FAM3A-214ENST00000442929 KCNH5Q8NCM2 988 aa26.22■■□□□ 1.79
FAM3A-214ENST00000442929 WASHC2AQ641Q2 1341 aa26.21■■□□□ 1.79
FAM3A-214ENST00000442929 C8orf37Q96NL8 207 aa26.21■■□□□ 1.79
FAM3A-214ENST00000442929 CGNL1Q0VF96 1302 aa26.2■■□□□ 1.79
FAM3A-214ENST00000442929 OVOS2A0A0J9YW53 1432 aa26.2■■□□□ 1.78
FAM3A-214ENST00000442929 OVOS2Q6IE36 1432 aa26.2■■□□□ 1.78
FAM3A-214ENST00000442929 LTN1O94822 1766 aa26.2■■□□□ 1.78
FAM3A-214ENST00000442929 NME9Q86XW9 330 aa26.19■■□□□ 1.78
FAM3A-214ENST00000442929 NGLY1Q96IV0 654 aa26.19■■□□□ 1.78
FAM3A-214ENST00000442929 COG3Q96JB2 828 aa26.19■■□□□ 1.78
FAM3A-214ENST00000442929 PANK3Q9H999 370 aa26.18■■□□□ 1.78
FAM3A-214ENST00000442929 GCP02774 474 aa26.17■■□□□ 1.78
FAM3A-214ENST00000442929 ZNF772Q68DY9 489 aaPredicted RBP26.17■■□□□ 1.78
FAM3A-214ENST00000442929 CPDO75976 1380 aa26.17■■□□□ 1.78
FAM3A-214ENST00000442929 ABCC6O95255 1503 aa26.16■■□□□ 1.78
FAM3A-214ENST00000442929 PRDM11Q9NQV5 511 aa26.16■■□□□ 1.78
FAM3A-214ENST00000442929 NSD2O96028 1365 aa26.16■■□□□ 1.78
FAM3A-214ENST00000442929 NFAT5O94916 1531 aa26.15■■□□□ 1.78
FAM3A-214ENST00000442929 KNSTRNQ9Y448 316 aa26.15■■□□□ 1.78
FAM3A-214ENST00000442929 AFF2P51816 1311 aa26.14■■□□□ 1.78
FAM3A-214ENST00000442929 CARD14Q9BXL6 1004 aa26.14■■□□□ 1.78
FAM3A-214ENST00000442929 KIAA0232Q92628 1395 aa26.14■■□□□ 1.78
FAM3A-214ENST00000442929 NRAPQ86VF7 1730 aa26.13■■□□□ 1.77
FAM3A-214ENST00000442929 SLIT2O94813 1529 aa26.12■■□□□ 1.77
FAM3A-214ENST00000442929 FYB1O15117 783 aa26.11■■□□□ 1.77
FAM3A-214ENST00000442929 POTEAQ6S8J7 498 aa26.11■■□□□ 1.77
FAM3A-214ENST00000442929 FNBP4Q8N3X1 1017 aaPredicted RBP26.11■■□□□ 1.77
FAM3A-214ENST00000442929 LMO7Q8WWI1 1683 aa26.11■■□□□ 1.77
FAM3A-214ENST00000442929 ZC3H6P61129 1189 aaKnown RBP26.1■■□□□ 1.77
FAM3A-214ENST00000442929 USP21Q9UK80 565 aa26.09■■□□□ 1.77
FAM3A-214ENST00000442929 GGNBP2Q9H3C7 697 aa26.08■■□□□ 1.77
FAM3A-214ENST00000442929 ZRANB1Q9UGI0 708 aa26.08■■□□□ 1.77
FAM3A-214ENST00000442929 SOX12O15370 315 aa26.07■■□□□ 1.76
FAM3A-214ENST00000442929 COL18A1P39060 1754 aa26.06■■□□□ 1.76
FAM3A-214ENST00000442929 FAM83GA6ND36 823 aa26.06■■□□□ 1.76
FAM3A-214ENST00000442929 AATKQ6ZMQ8 1374 aa26.06■■□□□ 1.76
FAM3A-214ENST00000442929 RGPD5Q99666 1765 aa26.05■■□□□ 1.76
FAM3A-214ENST00000442929 ZBTB7CA1YPR0 619 aa26.04■■□□□ 1.76
FAM3A-214ENST00000442929 UNC5CLQ8IV45 518 aa26.04■■□□□ 1.76
FAM3A-214ENST00000442929 TRPC5Q9UL62 973 aaPredicted RBP26.04■■□□□ 1.76
FAM3A-214ENST00000442929 BCL9LQ86UU0 1499 aa26.04■■□□□ 1.76
FAM3A-214ENST00000442929 MAP2P11137 1827 aaKnown RBP26.03■■□□□ 1.76
FAM3A-214ENST00000442929 BTG4Q9NY30 223 aa26.03■■□□□ 1.76
FAM3A-214ENST00000442929 FAM208AQ9UK61 1670 aaKnown RBP26.03■■□□□ 1.76
FAM3A-214ENST00000442929 CHRNA2Q15822 529 aa26.02■■□□□ 1.76
FAM3A-214ENST00000442929 ARHGEF25Q86VW2 580 aa26.02■■□□□ 1.76
FAM3A-214ENST00000442929 NPC1L1Q9UHC9 1359 aa26.01■■□□□ 1.75
FAM3A-214ENST00000442929 ATRNO75882 1429 aa26■■□□□ 1.75
FAM3A-214ENST00000442929 RTL1A6NKG5 1358 aa26■■□□□ 1.75
FAM3A-214ENST00000442929 CAMTA1Q9Y6Y1 1673 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms