RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 TNS3Q68CZ2 1445 aa18.67■□□□□ 0.58
TM9SF4-204ENST00000442842 TRPM3Q9HCF6 1732 aaPredicted RBP18.67■□□□□ 0.58
TM9SF4-204ENST00000442842 DDX10Q13206 875 aaKnown RBP18.67■□□□□ 0.58
TM9SF4-204ENST00000442842 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.67■□□□□ 0.583e-6■■□□□ 14
TM9SF4-204ENST00000442842 SOS2Q07890 1332 aaPredicted RBP18.67■□□□□ 0.58
TM9SF4-204ENST00000442842 PLEKHG5O94827 1062 aa18.65■□□□□ 0.58
TM9SF4-204ENST00000442842 HSPA1LP34931 641 aa18.65■□□□□ 0.58
TM9SF4-204ENST00000442842 TTC21BQ7Z4L5 1316 aa18.65■□□□□ 0.58
TM9SF4-204ENST00000442842 SBNO1A3KN83 1393 aa18.65■□□□□ 0.58
TM9SF4-204ENST00000442842 CARD14Q9BXL6 1004 aa18.64■□□□□ 0.57
TM9SF4-204ENST00000442842 SSH2Q76I76 1423 aa18.64■□□□□ 0.57
TM9SF4-204ENST00000442842 NUTM2GQ5VZR2 741 aa18.63■□□□□ 0.57
TM9SF4-204ENST00000442842 BRD4O60885 1362 aaPredicted RBP18.63■□□□□ 0.57
TM9SF4-204ENST00000442842 CNGB1Q14028 1251 aaPredicted RBP18.62■□□□□ 0.57
TM9SF4-204ENST00000442842 NME9Q86XW9 330 aa18.62■□□□□ 0.57
TM9SF4-204ENST00000442842 SPATA31A3Q5VYP0 1347 aa18.62■□□□□ 0.57
TM9SF4-204ENST00000442842 PIK3C2AO00443 1686 aa18.62■□□□□ 0.57
TM9SF4-204ENST00000442842 TTC21AQ8NDW8 1320 aa18.61■□□□□ 0.57
TM9SF4-204ENST00000442842 KNSTRNQ9Y448 316 aa18.61■□□□□ 0.57
TM9SF4-204ENST00000442842 ALS2Q96Q42 1657 aa18.6■□□□□ 0.57
TM9SF4-204ENST00000442842 ARHGEF10O15013 1369 aa18.6■□□□□ 0.57
TM9SF4-204ENST00000442842 ABTB2Q8N961 1025 aa18.6■□□□□ 0.57
TM9SF4-204ENST00000442842 LRRC59Q96AG4 307 aaKnown RBP18.6■□□□□ 0.57
TM9SF4-204ENST00000442842 KIF20BQ96Q89 1820 aa18.58■□□□□ 0.57
TM9SF4-204ENST00000442842 PNPLA6Q8IY17 1366 aa18.58■□□□□ 0.57
TM9SF4-204ENST00000442842 CGNL1Q0VF96 1302 aa18.58■□□□□ 0.57
TM9SF4-204ENST00000442842 GGNBP2Q9H3C7 697 aa18.58■□□□□ 0.56
TM9SF4-204ENST00000442842 ZRANB1Q9UGI0 708 aa18.58■□□□□ 0.56
TM9SF4-204ENST00000442842 JCADQ9P266 1359 aa18.56■□□□□ 0.56
TM9SF4-204ENST00000442842 NLRP6P59044 892 aa18.56■□□□□ 0.56
TM9SF4-204ENST00000442842 HAP1P54257 671 aaPredicted RBP18.55■□□□□ 0.56
TM9SF4-204ENST00000442842 CC2D1BQ5T0F9 858 aaKnown RBP18.55■□□□□ 0.56
TM9SF4-204ENST00000442842 OVOS2A0A0J9YW53 1432 aa18.55■□□□□ 0.56
TM9SF4-204ENST00000442842 OVOS2Q6IE36 1432 aa18.55■□□□□ 0.56
TM9SF4-204ENST00000442842 MED1Q15648 1581 aaPredicted RBP18.55■□□□□ 0.56
TM9SF4-204ENST00000442842 SHPRHQ149N8 1683 aa18.54■□□□□ 0.56
TM9SF4-204ENST00000442842 FYB1O15117 783 aa18.54■□□□□ 0.56
TM9SF4-204ENST00000442842 SOX12O15370 315 aa18.54■□□□□ 0.56
TM9SF4-204ENST00000442842 PER1O15534 1290 aaPredicted RBP18.54■□□□□ 0.56
TM9SF4-204ENST00000442842 COG3Q96JB2 828 aa18.54■□□□□ 0.56
TM9SF4-204ENST00000442842 COL22A1Q8NFW1 1626 aaPredicted RBP18.53■□□□□ 0.56
TM9SF4-204ENST00000442842 PHRF1Q9P1Y6 1649 aaKnown RBP18.53■□□□□ 0.56
TM9SF4-204ENST00000442842 AMER1Q5JTC6 1135 aaPredicted RBP18.53■□□□□ 0.56
TM9SF4-204ENST00000442842 NLRP13Q86W25 1043 aa18.53■□□□□ 0.56
TM9SF4-204ENST00000442842 CABLES1Q8TDN4 633 aa18.53■□□□□ 0.56
TM9SF4-204ENST00000442842 NSD2O96028 1365 aa18.53■□□□□ 0.56
TM9SF4-204ENST00000442842 USP31Q70CQ4 1352 aa18.53■□□□□ 0.56
TM9SF4-204ENST00000442842 ABCA3Q99758 1704 aa18.52■□□□□ 0.55
TM9SF4-204ENST00000442842 SLIT3O75094 1523 aa18.51■□□□□ 0.55
TM9SF4-204ENST00000442842 NUTM2BA6NNL0 878 aaPredicted RBP18.51■□□□□ 0.55
TM9SF4-204ENST00000442842 NUTM2EB1AL46 878 aaPredicted RBP18.51■□□□□ 0.55
TM9SF4-204ENST00000442842 NUTM2AQ8IVF1 878 aaPredicted RBP18.51■□□□□ 0.55
TM9SF4-204ENST00000442842 MARF1Q9Y4F3 1742 aaKnown RBP18.51■□□□□ 0.55
TM9SF4-204ENST00000442842 USP54Q70EL1 1684 aa18.5■□□□□ 0.55
TM9SF4-204ENST00000442842 USP19O94966 1318 aa18.5■□□□□ 0.55
TM9SF4-204ENST00000442842 ANKRD26Q9UPS8 1709 aa18.49■□□□□ 0.55
TM9SF4-204ENST00000442842 CRYBG1Q9Y4K1 1723 aa18.49■□□□□ 0.55
TM9SF4-204ENST00000442842 ZBTB7CA1YPR0 619 aa18.49■□□□□ 0.55
TM9SF4-204ENST00000442842 TNNT2P45379 298 aaPredicted RBP18.49■□□□□ 0.55
TM9SF4-204ENST00000442842 MORC1Q86VD1 984 aa18.49■□□□□ 0.55
TM9SF4-204ENST00000442842 ILDR1Q86SU0 546 aaPredicted RBP18.48■□□□□ 0.55
TM9SF4-204ENST00000442842 NPC1L1Q9UHC9 1359 aa18.47■□□□□ 0.55
TM9SF4-204ENST00000442842 NFAT5O94916 1531 aa18.46■□□□□ 0.55
TM9SF4-204ENST00000442842 SPATA31A6Q5VVP1 1343 aa18.46■□□□□ 0.55
TM9SF4-204ENST00000442842 LRP6O75581 1613 aa18.45■□□□□ 0.54
TM9SF4-204ENST00000442842 ADAMTS2O95450 1211 aa18.45■□□□□ 0.54
TM9SF4-204ENST00000442842 GCP02774 474 aa18.45■□□□□ 0.54
TM9SF4-204ENST00000442842 KCNH5Q8NCM2 988 aa18.45■□□□□ 0.54
TM9SF4-204ENST00000442842 ZC3H6P61129 1189 aaKnown RBP18.44■□□□□ 0.54
TM9SF4-204ENST00000442842 FBLN1P23142 703 aa18.43■□□□□ 0.54
TM9SF4-204ENST00000442842 KIAA0232Q92628 1395 aa18.42■□□□□ 0.54
TM9SF4-204ENST00000442842 RRS1Q15050 365 aaKnown RBP18.42■□□□□ 0.54
TM9SF4-204ENST00000442842 MEX3CQ5U5Q3 659 aaKnown RBP18.42■□□□□ 0.54
TM9SF4-204ENST00000442842 PARD3Q8TEW0 1356 aa18.41■□□□□ 0.54
TM9SF4-204ENST00000442842 PRDM11Q9NQV5 511 aa18.4■□□□□ 0.54
TM9SF4-204ENST00000442842 PPM1GO15355 546 aaPredicted RBP18.39■□□□□ 0.53
TM9SF4-204ENST00000442842 ANP32CO43423 234 aa18.39■□□□□ 0.53
TM9SF4-204ENST00000442842 CHRNA2Q15822 529 aa18.39■□□□□ 0.53
TM9SF4-204ENST00000442842 DIEXFQ68CQ4 756 aaKnown RBP18.39■□□□□ 0.53
TM9SF4-204ENST00000442842 C8orf37Q96NL8 207 aa18.38■□□□□ 0.53
TM9SF4-204ENST00000442842 EMILIN1Q9Y6C2 1016 aa18.38■□□□□ 0.53
TM9SF4-204ENST00000442842 MAP3K19Q56UN5 1328 aa18.38■□□□□ 0.53
TM9SF4-204ENST00000442842 CPDO75976 1380 aa18.38■□□□□ 0.53
TM9SF4-204ENST00000442842 AATKQ6ZMQ8 1374 aa18.38■□□□□ 0.53
TM9SF4-204ENST00000442842 LTN1O94822 1766 aa18.37■□□□□ 0.53
TM9SF4-204ENST00000442842 AMPHP49418 695 aa18.36■□□□□ 0.53
TM9SF4-204ENST00000442842 RALBP1Q15311 655 aa18.36■□□□□ 0.53
TM9SF4-204ENST00000442842 ARHGEF25Q86VW2 580 aa18.36■□□□□ 0.53
TM9SF4-204ENST00000442842 PRKRIP1Q9H875 184 aaPredicted RBP18.36■□□□□ 0.53
TM9SF4-204ENST00000442842 COL14A1Q05707 1796 aaKnown RBP18.35■□□□□ 0.53
TM9SF4-204ENST00000442842 PEAK1Q9H792 1746 aa18.35■□□□□ 0.53
TM9SF4-204ENST00000442842 SMG6Q86US8 1419 aaKnown RBP18.34■□□□□ 0.53
TM9SF4-204ENST00000442842 RTL1A6NKG5 1358 aa18.34■□□□□ 0.53
TM9SF4-204ENST00000442842 PPP2R1AP30153 589 aa18.34■□□□□ 0.53
TM9SF4-204ENST00000442842 POLKQ9UBT6 870 aa18.34■□□□□ 0.53
TM9SF4-204ENST00000442842 PLCH1Q4KWH8 1693 aa18.34■□□□□ 0.53
TM9SF4-204ENST00000442842 FLT4P35916 1363 aa18.33■□□□□ 0.53
TM9SF4-204ENST00000442842 MYBBP1AQ9BQG0 1328 aaKnown RBP18.33■□□□□ 0.53
TM9SF4-204ENST00000442842 FAM83GA6ND36 823 aa18.33■□□□□ 0.52
TM9SF4-204ENST00000442842 HOXC9P31274 260 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms