RNA–Protein interactions for RNA: ENST00000442677.3

CDH23-207, Transcript of cadherin related 23, humanhuman

TSL 5

Gene CDH23, Length 7,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-207ENST00000442677 AIMP1Q12904 312 aaKnown RBP18.67■□□□□ 0.58
CDH23-207ENST00000442677 TRERF1Q96PN7 1200 aa18.66■□□□□ 0.58
CDH23-207ENST00000442677 STK3Q13188 491 aa18.66■□□□□ 0.58
CDH23-207ENST00000442677 DIAPH1O60610 1272 aaKnown RBP18.66■□□□□ 0.58
CDH23-207ENST00000442677 SYTL4Q96C24 671 aaPredicted RBP18.66■□□□□ 0.58
CDH23-207ENST00000442677 GPATCH11Q8N954 259 aa18.66■□□□□ 0.58
CDH23-207ENST00000442677 FSD1Q9BTV5 496 aa18.66■□□□□ 0.58
CDH23-207ENST00000442677 PDCL2Q8N4E4 241 aa18.65■□□□□ 0.58
CDH23-207ENST00000442677 TSPYL4Q9UJ04 414 aa18.65■□□□□ 0.58
CDH23-207ENST00000442677 IKQ13123 557 aaPredicted RBP18.65■□□□□ 0.58
CDH23-207ENST00000442677 STK38Q15208 465 aa18.65■□□□□ 0.58
CDH23-207ENST00000442677 USP47Q96K76 1375 aa18.64■□□□□ 0.58
CDH23-207ENST00000442677 ZNF396Q96N95 335 aaPredicted RBP18.64■□□□□ 0.58
CDH23-207ENST00000442677 EID1Q9Y6B2 187 aa18.64■□□□□ 0.58
CDH23-207ENST00000442677 HMOX1P09601 288 aa18.64■□□□□ 0.57
CDH23-207ENST00000442677 ANKRD18AQ8IVF6 992 aa18.64■□□□□ 0.57
CDH23-207ENST00000442677 CCAR1Q8IX12 1150 aaKnown RBP18.63■□□□□ 0.57
CDH23-207ENST00000442677 RUNDC1Q96C34 613 aa18.63■□□□□ 0.57
CDH23-207ENST00000442677 DNAJC2Q99543 621 aaKnown RBP18.63■□□□□ 0.57
CDH23-207ENST00000442677 GOLGA6L10A0A0M3HER8 536 aa18.63■□□□□ 0.57
CDH23-207ENST00000442677 KRT18P05783 430 aaKnown RBP18.63■□□□□ 0.57
CDH23-207ENST00000442677 TANGO6Q9C0B7 1094 aa18.63■□□□□ 0.57
CDH23-207ENST00000442677 KIF7Q2M1P5 1343 aa18.63■□□□□ 0.57
CDH23-207ENST00000442677 HSP90AB4PQ58FF6 505 aa18.63■□□□□ 0.57
CDH23-207ENST00000442677 RIC3Q7Z5B4 369 aa18.63■□□□□ 0.57
CDH23-207ENST00000442677 TXLNAP40222 546 aa18.63■□□□□ 0.57
CDH23-207ENST00000442677 C1orf115Q9H7X2 142 aa18.62■□□□□ 0.57
CDH23-207ENST00000442677 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.62■□□□□ 0.57
CDH23-207ENST00000442677 MINK1Q8N4C8 1332 aaPredicted RBP18.61■□□□□ 0.57
CDH23-207ENST00000442677 UBTFL1P0CB47 393 aaPredicted RBP18.61■□□□□ 0.57
CDH23-207ENST00000442677 EVC2Q86UK5 1308 aa18.61■□□□□ 0.57
CDH23-207ENST00000442677 ESPNB1AK53 854 aa18.61■□□□□ 0.57
CDH23-207ENST00000442677 WASHC2CQ9Y4E1 1318 aa18.6■□□□□ 0.57
CDH23-207ENST00000442677 ME1P48163 572 aa18.6■□□□□ 0.57
CDH23-207ENST00000442677 RBM33Q96EV2 1170 aaKnown RBP18.6■□□□□ 0.57
CDH23-207ENST00000442677 ZHX3Q9H4I2 956 aa18.6■□□□□ 0.57
CDH23-207ENST00000442677 PDZRN3Q9UPQ7 1066 aa18.6■□□□□ 0.57
CDH23-207ENST00000442677 GBP2P32456 591 aaPredicted RBP18.59■□□□□ 0.57
CDH23-207ENST00000442677 RABEP1Q15276 862 aa18.59■□□□□ 0.57
CDH23-207ENST00000442677 SEPT11Q9NVA2 429 aaKnown RBP18.59■□□□□ 0.57
CDH23-207ENST00000442677 EZRP15311 586 aaKnown RBP18.59■□□□□ 0.57
CDH23-207ENST00000442677 IPO4Q8TEX9 1081 aaKnown RBP18.59■□□□□ 0.57
CDH23-207ENST00000442677 PDCL3Q9H2J4 239 aa18.59■□□□□ 0.57
CDH23-207ENST00000442677 PDCP20941 246 aa18.59■□□□□ 0.57
CDH23-207ENST00000442677 FILIP1Q7Z7B0 1213 aa18.58■□□□□ 0.57
CDH23-207ENST00000442677 MAP4K4O95819 1239 aaPredicted RBP18.58■□□□□ 0.56
CDH23-207ENST00000442677 SART3Q15020 963 aaKnown RBP18.57■□□□□ 0.56
CDH23-207ENST00000442677 CGNQ9P2M7 1197 aaKnown RBP18.57■□□□□ 0.56
CDH23-207ENST00000442677 CCDC144AA2RUR9 1427 aa18.57■□□□□ 0.56
CDH23-207ENST00000442677 NF2P35240 595 aa18.57■□□□□ 0.56
CDH23-207ENST00000442677 MCM2P49736 904 aa18.56■□□□□ 0.56
CDH23-207ENST00000442677 MAP2K1Q02750 393 aaPredicted RBP18.56■□□□□ 0.56
CDH23-207ENST00000442677 TMCO3Q6UWJ1 677 aa18.56■□□□□ 0.56
CDH23-207ENST00000442677 POLR3GO15318 223 aaPredicted RBP18.56■□□□□ 0.56
CDH23-207ENST00000442677 LUC7LQ9NQ29 371 aaKnown RBP18.56■□□□□ 0.56
CDH23-207ENST00000442677 CFAP45Q9UL16 551 aa18.56■□□□□ 0.56
CDH23-207ENST00000442677 PIP4K2AP48426 406 aaPredicted RBP18.55■□□□□ 0.56
CDH23-207ENST00000442677 ZHX1Q9UKY1 873 aaPredicted RBP18.55■□□□□ 0.56
CDH23-207ENST00000442677 ABCC8Q09428 1581 aa18.55■□□□□ 0.56
CDH23-207ENST00000442677 KIAA1328Q86T90 577 aa18.55■□□□□ 0.56
CDH23-207ENST00000442677 CCDC113Q9H0I3 377 aa18.55■□□□□ 0.56
CDH23-207ENST00000442677 CARMIL2Q6F5E8 1435 aa18.55■□□□□ 0.56
CDH23-207ENST00000442677 DHX57Q6P158 1386 aaKnown RBP18.55■□□□□ 0.56
CDH23-207ENST00000442677 K7ELQ4 463 aaPredicted RBP18.55■□□□□ 0.56
CDH23-207ENST00000442677 SURF6O75683 361 aaKnown RBP18.55■□□□□ 0.56
CDH23-207ENST00000442677 ZNF428Q96B54 188 aa18.55■□□□□ 0.56
CDH23-207ENST00000442677 DACH1Q9UI36 760 aa18.55■□□□□ 0.56
CDH23-207ENST00000442677 SHTN1A0MZ66 631 aa18.54■□□□□ 0.56
CDH23-207ENST00000442677 CBFA2T2O43439 604 aa18.54■□□□□ 0.56
CDH23-207ENST00000442677 GNAI1P63096 354 aa18.54■□□□□ 0.56
CDH23-207ENST00000442677 UBXN4Q92575 508 aa18.54■□□□□ 0.56
CDH23-207ENST00000442677 IQCEQ6IPM2 695 aa18.54■□□□□ 0.56
CDH23-207ENST00000442677 NACADO15069 1562 aa18.54■□□□□ 0.56
CDH23-207ENST00000442677 EFCAB2Q5VUJ9 269 aa18.54■□□□□ 0.56
CDH23-207ENST00000442677 STIM1Q13586 685 aa18.53■□□□□ 0.56
CDH23-207ENST00000442677 CDCA7LQ96GN5 454 aa18.53■□□□□ 0.56
CDH23-207ENST00000442677 RSPH4AQ5TD94 716 aa18.53■□□□□ 0.56
CDH23-207ENST00000442677 RNF187Q5TA31 235 aaPredicted RBP18.52■□□□□ 0.56
CDH23-207ENST00000442677 ZFP91Q96JP5 570 aaPredicted RBP18.52■□□□□ 0.56
CDH23-207ENST00000442677 CRACR2AQ9BSW2 395 aa18.52■□□□□ 0.55
CDH23-207ENST00000442677 TMX1Q9H3N1 280 aa18.52■□□□□ 0.55
CDH23-207ENST00000442677 WWC2Q6AWC2 1192 aa18.52■□□□□ 0.55
CDH23-207ENST00000442677 KRT85P78386 507 aa18.51■□□□□ 0.55
CDH23-207ENST00000442677 WDR33Q9C0J8 1336 aaKnown RBP18.51■□□□□ 0.55
CDH23-207ENST00000442677 SYCE3A1L190 88 aa18.51■□□□□ 0.55
CDH23-207ENST00000442677 TNNT1P13805 278 aa18.51■□□□□ 0.55
CDH23-207ENST00000442677 SLC26A8Q96RN1 970 aa18.51■□□□□ 0.55
CDH23-207ENST00000442677 BCCIPQ9P287 314 aaKnown RBP eCLIP18.51■□□□□ 0.55
CDH23-207ENST00000442677 CAMK4Q16566 473 aa18.5■□□□□ 0.55
CDH23-207ENST00000442677 CYP46A1Q9Y6A2 500 aa18.5■□□□□ 0.55
CDH23-207ENST00000442677 EPB41L2O43491 1005 aaKnown RBP18.5■□□□□ 0.55
CDH23-207ENST00000442677 LARP1BQ659C4 914 aaKnown RBP18.5■□□□□ 0.55
CDH23-207ENST00000442677 JMYQ8N9B5 988 aa18.5■□□□□ 0.55
CDH23-207ENST00000442677 DHX8Q14562 1220 aaKnown RBP18.5■□□□□ 0.55
CDH23-207ENST00000442677 CCDC148Q8NFR7 591 aa18.5■□□□□ 0.55
CDH23-207ENST00000442677 SPATA32Q96LK8 384 aa18.5■□□□□ 0.55
CDH23-207ENST00000442677 TBC1D2BQ9UPU7 963 aa18.5■□□□□ 0.55
CDH23-207ENST00000442677 NUP62CLQ9H1M0 184 aa18.49■□□□□ 0.55
CDH23-207ENST00000442677 FAM177BA6PVY3 158 aa18.49■□□□□ 0.55
CDH23-207ENST00000442677 CASQ1P31415 396 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms