RNA–Protein interactions for RNA: ENST00000442241.8

NLE1-202, Transcript of notchless homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLE1, Length 2,588 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-202ENST00000442241 RIMBP3BA6NNM3 1639 aa20.68■□□□□ 0.9
NLE1-202ENST00000442241 RIMBP3Q9UFD9 1639 aa20.68■□□□□ 0.9
NLE1-202ENST00000442241 NSD2O96028 1365 aa20.68■□□□□ 0.9
NLE1-202ENST00000442241 PLPPR3Q6T4P5 718 aa20.68■□□□□ 0.9
NLE1-202ENST00000442241 TXNDC2Q86VQ3 553 aa20.68■□□□□ 0.9
NLE1-202ENST00000442241 ATAD2Q6PL18 1390 aa20.67■□□□□ 0.9
NLE1-202ENST00000442241 RIPK4P57078 832 aa20.67■□□□□ 0.9
NLE1-202ENST00000442241 MYH16Q9H6N6 1097 aa20.67■□□□□ 0.9
NLE1-202ENST00000442241 HMOX1P09601 288 aa20.66■□□□□ 0.9
NLE1-202ENST00000442241 DIAPH1O60610 1272 aaKnown RBP20.65■□□□□ 0.9
NLE1-202ENST00000442241 SEC24BO95487 1268 aa20.65■□□□□ 0.9
NLE1-202ENST00000442241 DIP2BQ9P265 1576 aa20.65■□□□□ 0.9
NLE1-202ENST00000442241 NEFMP07197 916 aa20.65■□□□□ 0.9
NLE1-202ENST00000442241 CCDC27Q2M243 656 aa20.64■□□□□ 0.9
NLE1-202ENST00000442241 SMC4Q9NTJ3 1288 aa20.64■□□□□ 0.9
NLE1-202ENST00000442241 NUTM2FA1L443 756 aa20.64■□□□□ 0.89
NLE1-202ENST00000442241 THUMPD2Q9BTF0 503 aaKnown RBP20.64■□□□□ 0.89
NLE1-202ENST00000442241 RIMS2Q9UQ26 1411 aa20.63■□□□□ 0.89
NLE1-202ENST00000442241 NLRP1Q9C000 1473 aa20.63■□□□□ 0.89
NLE1-202ENST00000442241 NME9Q86XW9 330 aa20.62■□□□□ 0.89
NLE1-202ENST00000442241 EMILIN1Q9Y6C2 1016 aa20.62■□□□□ 0.89
NLE1-202ENST00000442241 A2ML1A8K2U0 1454 aa20.62■□□□□ 0.89
NLE1-202ENST00000442241 FTSJ3Q8IY81 847 aaKnown RBP20.62■□□□□ 0.89
NLE1-202ENST00000442241 COL3A1P02461 1466 aaPredicted RBP20.62■□□□□ 0.89
NLE1-202ENST00000442241 ARHGEF40Q8TER5 1519 aa20.62■□□□□ 0.89
NLE1-202ENST00000442241 SSH1Q8WYL5 1049 aa20.61■□□□□ 0.89
NLE1-202ENST00000442241 PRKAR2BP31323 418 aa20.6■□□□□ 0.89
NLE1-202ENST00000442241 METP08581 1390 aa20.6■□□□□ 0.89
NLE1-202ENST00000442241 ESF1Q9H501 851 aaKnown RBP20.6■□□□□ 0.89
NLE1-202ENST00000442241 POLKQ9UBT6 870 aa20.6■□□□□ 0.89
NLE1-202ENST00000442241 PHACTR3Q96KR7 559 aa20.59■□□□□ 0.89
NLE1-202ENST00000442241 PDZRN3Q9UPQ7 1066 aa20.58■□□□□ 0.89
NLE1-202ENST00000442241 NINLQ9Y2I6 1382 aa20.58■□□□□ 0.89
NLE1-202ENST00000442241 RRS1Q15050 365 aaKnown RBP20.58■□□□□ 0.88
NLE1-202ENST00000442241 ZKSCAN2Q63HK3 967 aa20.58■□□□□ 0.88
NLE1-202ENST00000442241 DDRGK1Q96HY6 314 aa20.58■□□□□ 0.88
NLE1-202ENST00000442241 DAXXQ9UER7 740 aaPredicted RBP20.58■□□□□ 0.88
NLE1-202ENST00000442241 DZIP1LQ8IYY4 767 aaKnown RBP20.57■□□□□ 0.88
NLE1-202ENST00000442241 NOB1Q9ULX3 412 aaKnown RBP20.57■□□□□ 0.88
NLE1-202ENST00000442241 ADGRB2O60241 1585 aa20.57■□□□□ 0.88
NLE1-202ENST00000442241 TRIM27P14373 513 aa20.57■□□□□ 0.88
NLE1-202ENST00000442241 ITPRIPQ8IWB1 547 aa20.57■□□□□ 0.88
NLE1-202ENST00000442241 ELL2O00472 640 aaPredicted RBP20.56■□□□□ 0.88
NLE1-202ENST00000442241 MVPQ14764 893 aaKnown RBP20.56■□□□□ 0.88
NLE1-202ENST00000442241 RTN4Q9NQC3 1192 aaKnown RBP20.55■□□□□ 0.88
NLE1-202ENST00000442241 WASLO00401 505 aaPredicted RBP20.54■□□□□ 0.88
NLE1-202ENST00000442241 PMFBP1Q8TBY8 1022 aa20.53■□□□□ 0.88
NLE1-202ENST00000442241 PPIP5K1Q6PFW1 1433 aa20.53■□□□□ 0.88
NLE1-202ENST00000442241 SOX12O15370 315 aa20.53■□□□□ 0.88
NLE1-202ENST00000442241 NUDT16Q96DE0 195 aaKnown RBP20.52■□□□□ 0.88
NLE1-202ENST00000442241 RSPH6AQ9H0K4 717 aa20.52■□□□□ 0.88
NLE1-202ENST00000442241 ZMYM3Q14202 1370 aa20.52■□□□□ 0.88
NLE1-202ENST00000442241 USP19O94966 1318 aa20.52■□□□□ 0.87
NLE1-202ENST00000442241 TMEM57Q8N5G2 664 aa20.51■□□□□ 0.87
NLE1-202ENST00000442241 KIF20BQ96Q89 1820 aa20.51■□□□□ 0.87
NLE1-202ENST00000442241 ANKRD26Q9UPS8 1709 aa20.51■□□□□ 0.87
NLE1-202ENST00000442241 CEBPAP49715 358 aaPredicted RBP20.51■□□□□ 0.87
NLE1-202ENST00000442241 LRRC7Q96NW7 1537 aa20.5■□□□□ 0.87
NLE1-202ENST00000442241 MAP2P11137 1827 aaKnown RBP20.5■□□□□ 0.87
NLE1-202ENST00000442241 RWDD1Q9H446 243 aaPredicted RBP20.49■□□□□ 0.87
NLE1-202ENST00000442241 PNPLA6Q8IY17 1366 aa20.49■□□□□ 0.87
NLE1-202ENST00000442241 FAM83GA6ND36 823 aa20.49■□□□□ 0.87
NLE1-202ENST00000442241 DCTN1Q14203 1278 aa20.49■□□□□ 0.87
NLE1-202ENST00000442241 ATF7IPQ6VMQ6 1270 aa20.49■□□□□ 0.87
NLE1-202ENST00000442241 TSPYL6Q8N831 410 aa20.48■□□□□ 0.87
NLE1-202ENST00000442241 SPATA31D1Q6ZQQ2 1576 aa20.48■□□□□ 0.87
NLE1-202ENST00000442241 FCHSD2O94868 740 aa20.48■□□□□ 0.87
NLE1-202ENST00000442241 SETD1AO15047 1707 aaKnown RBP20.47■□□□□ 0.87
NLE1-202ENST00000442241 PRR36Q9H6K5 1346 aa20.46■□□□□ 0.87
NLE1-202ENST00000442241 MED14O60244 1454 aa20.46■□□□□ 0.87
NLE1-202ENST00000442241 AGLP35573 1532 aa20.46■□□□□ 0.87
NLE1-202ENST00000442241 CPS1P31327 1500 aa20.45■□□□□ 0.86
NLE1-202ENST00000442241 NFKBIBQ15653 356 aa20.45■□□□□ 0.86
NLE1-202ENST00000442241 SLC26A8Q96RN1 970 aa20.45■□□□□ 0.86
NLE1-202ENST00000442241 NRXN3Q9Y4C0 1643 aa20.45■□□□□ 0.86
NLE1-202ENST00000442241 C1orf115Q9H7X2 142 aa20.45■□□□□ 0.86
NLE1-202ENST00000442241 IL13P35225 146 aa20.44■□□□□ 0.86
NLE1-202ENST00000442241 COG3Q96JB2 828 aa20.44■□□□□ 0.86
NLE1-202ENST00000442241 GSE1Q14687 1217 aa20.44■□□□□ 0.86
NLE1-202ENST00000442241 PPP6R1Q9UPN7 881 aa20.44■□□□□ 0.86
NLE1-202ENST00000442241 NFE2L2Q16236 605 aa20.43■□□□□ 0.86
NLE1-202ENST00000442241 AEBP1Q8IUX7 1158 aa20.42■□□□□ 0.86
NLE1-202ENST00000442241 CCDC61Q9Y6R9 512 aa20.42■□□□□ 0.86
NLE1-202ENST00000442241 FAM135BQ49AJ0 1406 aa20.42■□□□□ 0.86
NLE1-202ENST00000442241 ATP7BP35670 1465 aa20.42■□□□□ 0.86
NLE1-202ENST00000442241 LTKP29376 864 aa20.41■□□□□ 0.86
NLE1-202ENST00000442241 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.41■□□□□ 0.86
NLE1-202ENST00000442241 PNNQ9H307 717 aaKnown RBP20.41■□□□□ 0.86
NLE1-202ENST00000442241 ROBO2Q9HCK4 1378 aa20.41■□□□□ 0.86
NLE1-202ENST00000442241 IL16Q14005 1332 aa20.41■□□□□ 0.86
NLE1-202ENST00000442241 CPSF1Q10570 1443 aaKnown RBP20.41■□□□□ 0.86
NLE1-202ENST00000442241 SPRYD3Q8NCJ5 442 aa20.41■□□□□ 0.86
NLE1-202ENST00000442241 SLKQ9H2G2 1235 aaPredicted RBP20.41■□□□□ 0.86
NLE1-202ENST00000442241 MBIPQ9NS73 344 aa20.41■□□□□ 0.86
NLE1-202ENST00000442241 BRPF3Q9ULD4 1205 aa20.41■□□□□ 0.86
NLE1-202ENST00000442241 DDX19BQ9UMR2 479 aa20.41■□□□□ 0.86
NLE1-202ENST00000442241 DLC1Q96QB1 1528 aa20.4■□□□□ 0.86
NLE1-202ENST00000442241 NCBP3Q53F19 620 aaKnown RBP20.4■□□□□ 0.86
NLE1-202ENST00000442241 CT47B1P0C2W7 299 aaPredicted RBP20.4■□□□□ 0.86
NLE1-202ENST00000442241 TNRQ92752 1358 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms