RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 CFAP53Q96M91 514 aa16.73■□□□□ 0.27
SLC48A1-201ENST00000442218 TBC1D2Q9BYX2 928 aa16.72■□□□□ 0.27
SLC48A1-201ENST00000442218 FOXD4L1Q9NU39 408 aa16.72■□□□□ 0.27
SLC48A1-201ENST00000442218 A2ML1A8K2U0 1454 aa16.72■□□□□ 0.27
SLC48A1-201ENST00000442218 NUTM2FA1L443 756 aa16.72■□□□□ 0.27
SLC48A1-201ENST00000442218 THUMPD2Q9BTF0 503 aaKnown RBP16.72■□□□□ 0.27
SLC48A1-201ENST00000442218 CEBPAP49715 358 aaPredicted RBP16.72■□□□□ 0.27
SLC48A1-201ENST00000442218 MYO3AQ8NEV4 1616 aa16.71■□□□□ 0.27
SLC48A1-201ENST00000442218 C1orf115Q9H7X2 142 aa16.71■□□□□ 0.27
SLC48A1-201ENST00000442218 UPF2Q9HAU5 1272 aaKnown RBP16.71■□□□□ 0.27
SLC48A1-201ENST00000442218 SSH1Q8WYL5 1049 aa16.7■□□□□ 0.26
SLC48A1-201ENST00000442218 CABP1Q9NZU7 370 aa16.7■□□□□ 0.26
SLC48A1-201ENST00000442218 ZRANB1Q9UGI0 708 aa16.7■□□□□ 0.26
SLC48A1-201ENST00000442218 BECN1Q14457 450 aa16.7■□□□□ 0.26
SLC48A1-201ENST00000442218 EVC2Q86UK5 1308 aa16.7■□□□□ 0.26
SLC48A1-201ENST00000442218 MAPK8IP3Q9UPT6 1336 aa16.7■□□□□ 0.26
SLC48A1-201ENST00000442218 QRICH2Q9H0J4 1663 aa16.69■□□□□ 0.26
SLC48A1-201ENST00000442218 POLR3AO14802 1390 aaPredicted RBP16.69■□□□□ 0.26
SLC48A1-201ENST00000442218 DZIP1LQ8IYY4 767 aaKnown RBP16.69■□□□□ 0.26
SLC48A1-201ENST00000442218 PMFBP1Q8TBY8 1022 aa16.69■□□□□ 0.26
SLC48A1-201ENST00000442218 NOB1Q9ULX3 412 aaKnown RBP16.69■□□□□ 0.26
SLC48A1-201ENST00000442218 TRIM27P14373 513 aa16.69■□□□□ 0.26
SLC48A1-201ENST00000442218 A0A1W2PP64 1363 aa16.68■□□□□ 0.26
SLC48A1-201ENST00000442218 LNPKQ9C0E8 428 aa16.68■□□□□ 0.26
SLC48A1-201ENST00000442218 NPC1L1Q9UHC9 1359 aa16.68■□□□□ 0.26
SLC48A1-201ENST00000442218 SBNO2Q9Y2G9 1366 aa16.68■□□□□ 0.26
SLC48A1-201ENST00000442218 MVPQ14764 893 aaKnown RBP16.68■□□□□ 0.26
SLC48A1-201ENST00000442218 ZKSCAN2Q63HK3 967 aa16.68■□□□□ 0.26
SLC48A1-201ENST00000442218 RWDD1Q9H446 243 aaPredicted RBP16.68■□□□□ 0.26
SLC48A1-201ENST00000442218 RIMS2Q9UQ26 1411 aa16.68■□□□□ 0.26
SLC48A1-201ENST00000442218 HMOX1P09601 288 aa16.67■□□□□ 0.26
SLC48A1-201ENST00000442218 ARHGEF28Q8N1W1 1705 aaKnown RBP16.67■□□□□ 0.26
SLC48A1-201ENST00000442218 FYB1O15117 783 aa16.67■□□□□ 0.26
SLC48A1-201ENST00000442218 RIPK4P57078 832 aa16.67■□□□□ 0.26
SLC48A1-201ENST00000442218 TNRQ92752 1358 aa16.67■□□□□ 0.26
SLC48A1-201ENST00000442218 TMEM57Q8N5G2 664 aa16.66■□□□□ 0.26
SLC48A1-201ENST00000442218 MYH16Q9H6N6 1097 aa16.66■□□□□ 0.26
SLC48A1-201ENST00000442218 SLC24A1O60721 1099 aa16.65■□□□□ 0.26
SLC48A1-201ENST00000442218 ALKQ9UM73 1620 aa16.65■□□□□ 0.26
SLC48A1-201ENST00000442218 SOX12O15370 315 aa16.65■□□□□ 0.26
SLC48A1-201ENST00000442218 TBC1D32Q96NH3 1257 aa16.65■□□□□ 0.26
SLC48A1-201ENST00000442218 TMPOP42166 694 aaKnown RBP16.64■□□□□ 0.26
SLC48A1-201ENST00000442218 CDK19Q9BWU1 502 aa16.64■□□□□ 0.26
SLC48A1-201ENST00000442218 TULP4Q9NRJ4 1543 aa16.64■□□□□ 0.25
SLC48A1-201ENST00000442218 DNAJC5Q9H3Z4 198 aa16.64■□□□□ 0.25
SLC48A1-201ENST00000442218 WDR63Q8IWG1 891 aa16.63■□□□□ 0.25
SLC48A1-201ENST00000442218 YTHDC2Q9H6S0 1430 aaKnown RBP16.63■□□□□ 0.25
SLC48A1-201ENST00000442218 PANK2Q9BZ23 570 aa16.63■□□□□ 0.25
SLC48A1-201ENST00000442218 C22orf23Q9BZE7 217 aa16.63■□□□□ 0.25
SLC48A1-201ENST00000442218 TRIM35Q9UPQ4 493 aa16.63■□□□□ 0.25
SLC48A1-201ENST00000442218 PTPRMP28827 1452 aa16.62■□□□□ 0.25
SLC48A1-201ENST00000442218 TXNDC2Q86VQ3 553 aa16.61■□□□□ 0.25
SLC48A1-201ENST00000442218 ANTXR1Q9H6X2 564 aa16.6■□□□□ 0.25
SLC48A1-201ENST00000442218 EMILIN1Q9Y6C2 1016 aa16.6■□□□□ 0.25
SLC48A1-201ENST00000442218 APBB1O00213 710 aa16.59■□□□□ 0.25
SLC48A1-201ENST00000442218 PHF23Q9BUL5 403 aaPredicted RBP16.59■□□□□ 0.25
SLC48A1-201ENST00000442218 NLRP1Q9C000 1473 aa16.59■□□□□ 0.25
SLC48A1-201ENST00000442218 ANKRD36BQ8N2N9 1353 aa16.59■□□□□ 0.25
SLC48A1-201ENST00000442218 RRS1Q15050 365 aaKnown RBP16.59■□□□□ 0.25
SLC48A1-201ENST00000442218 PHACTR3Q96KR7 559 aa16.59■□□□□ 0.25
SLC48A1-201ENST00000442218 ATF7IPQ6VMQ6 1270 aa16.58■□□□□ 0.24
SLC48A1-201ENST00000442218 NME9Q86XW9 330 aa16.57■□□□□ 0.24
SLC48A1-201ENST00000442218 PRKAR2BP31323 418 aa16.57■□□□□ 0.24
SLC48A1-201ENST00000442218 TSPYL6Q8N831 410 aa16.57■□□□□ 0.24
SLC48A1-201ENST00000442218 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.57■□□□□ 0.24
SLC48A1-201ENST00000442218 UBR1Q8IWV7 1749 aa16.57■□□□□ 0.24
SLC48A1-201ENST00000442218 NRXN3Q9Y4C0 1643 aa16.57■□□□□ 0.24
SLC48A1-201ENST00000442218 C3P01024 1663 aa16.56■□□□□ 0.24
SLC48A1-201ENST00000442218 SHPRHQ149N8 1683 aa16.56■□□□□ 0.24
SLC48A1-201ENST00000442218 PRKCSHP14314 528 aaPredicted RBP16.56■□□□□ 0.24
SLC48A1-201ENST00000442218 RBM42Q9BTD8 480 aaKnown RBP16.56■□□□□ 0.24
SLC48A1-201ENST00000442218 METP08581 1390 aa16.56■□□□□ 0.24
SLC48A1-201ENST00000442218 DCTN1Q14203 1278 aa16.56■□□□□ 0.24
SLC48A1-201ENST00000442218 ANKRD45Q5TZF3 282 aa16.56■□□□□ 0.24
SLC48A1-201ENST00000442218 ATAD2Q6PL18 1390 aa16.56■□□□□ 0.24
SLC48A1-201ENST00000442218 TMEM2Q9UHN6 1383 aa16.56■□□□□ 0.24
SLC48A1-201ENST00000442218 SETD1AO15047 1707 aaKnown RBP16.56■□□□□ 0.24
SLC48A1-201ENST00000442218 FER1L4A9Z1Z3 1794 aa16.56■□□□□ 0.24
SLC48A1-201ENST00000442218 PLEKHF1Q96S99 279 aa16.56■□□□□ 0.24
SLC48A1-201ENST00000442218 RRAGDQ9NQL2 400 aaPredicted RBP16.56■□□□□ 0.24
SLC48A1-201ENST00000442218 LTKP29376 864 aa16.55■□□□□ 0.24
SLC48A1-201ENST00000442218 FAM83GA6ND36 823 aa16.55■□□□□ 0.24
SLC48A1-201ENST00000442218 DIAPH1O60610 1272 aaKnown RBP16.55■□□□□ 0.24
SLC48A1-201ENST00000442218 NGEFQ8N5V2 710 aa16.54■□□□□ 0.24
SLC48A1-201ENST00000442218 IQSEC2Q5JU85 1478 aa16.54■□□□□ 0.24
SLC48A1-201ENST00000442218 TERF2IPQ9NYB0 399 aa16.53■□□□□ 0.24
SLC48A1-201ENST00000442218 MCM4P33991 863 aa16.53■□□□□ 0.24
SLC48A1-201ENST00000442218 DDX19BQ9UMR2 479 aa16.53■□□□□ 0.24
SLC48A1-201ENST00000442218 HSP90AA1P07900 732 aaKnown RBP16.52■□□□□ 0.23
SLC48A1-201ENST00000442218 CD2BP2O95400 341 aaKnown RBP16.51■□□□□ 0.23
SLC48A1-201ENST00000442218 XRCC6P12956 609 aaKnown RBP eCLIP16.51■□□□□ 0.23
SLC48A1-201ENST00000442218 HDGFP51858 240 aaKnown RBP16.51■□□□□ 0.23
SLC48A1-201ENST00000442218 HSCBQ8IWL3 235 aa16.51■□□□□ 0.23
SLC48A1-201ENST00000442218 POLKQ9UBT6 870 aa16.51■□□□□ 0.23
SLC48A1-201ENST00000442218 NINLQ9Y2I6 1382 aa16.51■□□□□ 0.23
SLC48A1-201ENST00000442218 CCDC27Q2M243 656 aa16.51■□□□□ 0.23
SLC48A1-201ENST00000442218 PLEKHG5O94827 1062 aa16.5■□□□□ 0.23
SLC48A1-201ENST00000442218 KRT24Q2M2I5 525 aa16.5■□□□□ 0.23
SLC48A1-201ENST00000442218 HDGFL2Q7Z4V5 671 aaPredicted RBP16.5■□□□□ 0.23
SLC48A1-201ENST00000442218 PUS7Q96PZ0 661 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms