RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 PCDHB15Q9Y5E8 787 aa7.99□□□□□ -1.13
HMGB3P9-201ENST00000441799 VARSP26640 1264 aaKnown RBP7.98□□□□□ -1.13
HMGB3P9-201ENST00000441799 MTMR2Q13614 643 aa7.98□□□□□ -1.13
HMGB3P9-201ENST00000441799 GIGYF2Q6Y7W6 1299 aaKnown RBP7.98□□□□□ -1.13
HMGB3P9-201ENST00000441799 H3BM21 787 aa7.97□□□□□ -1.13
HMGB3P9-201ENST00000441799 TTLL12Q14166 644 aaPredicted RBP7.97□□□□□ -1.13
HMGB3P9-201ENST00000441799 LYPD8Q6UX82 237 aa7.97□□□□□ -1.13
HMGB3P9-201ENST00000441799 NPAS3Q8IXF0 933 aa7.97□□□□□ -1.13
HMGB3P9-201ENST00000441799 BEGAINQ9BUH8 593 aa7.97□□□□□ -1.13
HMGB3P9-201ENST00000441799 KLF16Q9BXK1 252 aaPredicted RBP7.97□□□□□ -1.13
HMGB3P9-201ENST00000441799 ERBB4Q15303 1308 aa7.97□□□□□ -1.13
HMGB3P9-201ENST00000441799 SPDYE5A6NIY4 337 aa7.96□□□□□ -1.14
HMGB3P9-201ENST00000441799 NNTQ13423 1086 aa7.96□□□□□ -1.14
HMGB3P9-201ENST00000441799 TBC1D2Q9BYX2 928 aa7.96□□□□□ -1.14
HMGB3P9-201ENST00000441799 PLEKHG3A1L390 1219 aa7.95□□□□□ -1.14
HMGB3P9-201ENST00000441799 CFAP99D6REC4 459 aa7.95□□□□□ -1.14
HMGB3P9-201ENST00000441799 TIMP2P16035 220 aa7.95□□□□□ -1.14
HMGB3P9-201ENST00000441799 GJA5P36382 358 aa7.95□□□□□ -1.14
HMGB3P9-201ENST00000441799 RSBN1LQ6PCB5 846 aaPredicted RBP7.95□□□□□ -1.14
HMGB3P9-201ENST00000441799 ZC3H15Q8WU90 426 aaKnown RBP7.95□□□□□ -1.14
HMGB3P9-201ENST00000441799 MRPL14Q6P1L8 145 aaKnown RBP7.94□□□□□ -1.14
HMGB3P9-201ENST00000441799 FOXJ1Q92949 421 aa7.94□□□□□ -1.14
HMGB3P9-201ENST00000441799 IRF7Q92985 503 aa7.94□□□□□ -1.14
HMGB3P9-201ENST00000441799 SPTLC1O15269 473 aa7.93□□□□□ -1.14
HMGB3P9-201ENST00000441799 WDR4P57081 412 aaKnown RBP7.93□□□□□ -1.14
HMGB3P9-201ENST00000441799 CDK15Q96Q40 435 aa7.93□□□□□ -1.14
HMGB3P9-201ENST00000441799 SOBPA7XYQ1 873 aa7.92□□□□□ -1.14
HMGB3P9-201ENST00000441799 F12P00748 615 aaPredicted RBP7.92□□□□□ -1.14
HMGB3P9-201ENST00000441799 HRCP23327 699 aa7.92□□□□□ -1.14
HMGB3P9-201ENST00000441799 CTHP32929 405 aa7.92□□□□□ -1.14
HMGB3P9-201ENST00000441799 PARP9Q8IXQ6 854 aa7.92□□□□□ -1.14
HMGB3P9-201ENST00000441799 ZSCAN1Q8NBB4 408 aa7.92□□□□□ -1.14
HMGB3P9-201ENST00000441799 PURBQ96QR8 312 aaKnown RBP7.92□□□□□ -1.14
HMGB3P9-201ENST00000441799 MAP10Q9P2G4 905 aa7.92□□□□□ -1.14
HMGB3P9-201ENST00000441799 C4orf48Q5BLP8 95 aa7.91□□□□□ -1.14
HMGB3P9-201ENST00000441799 FAM174AQ8TBP5 190 aa7.91□□□□□ -1.14
HMGB3P9-201ENST00000441799 PER1O15534 1290 aaPredicted RBP7.9□□□□□ -1.14
HMGB3P9-201ENST00000441799 ADH1CP00326 375 aa7.9□□□□□ -1.14
HMGB3P9-201ENST00000441799 CABLES1Q8TDN4 633 aa7.9□□□□□ -1.14
HMGB3P9-201ENST00000441799 ZFAND3Q9H8U3 227 aa7.9□□□□□ -1.14
HMGB3P9-201ENST00000441799 TRIM66O15016 1216 aa7.89□□□□□ -1.15
HMGB3P9-201ENST00000441799 NR3C2P08235 984 aa7.89□□□□□ -1.15
HMGB3P9-201ENST00000441799 GRM5P41594 1212 aa7.89□□□□□ -1.15
HMGB3P9-201ENST00000441799 SCARF1Q14162 830 aa7.89□□□□□ -1.15
HMGB3P9-201ENST00000441799 RIC3Q7Z5B4 369 aa7.88□□□□□ -1.15
HMGB3P9-201ENST00000441799 ZBTB3Q9H5J0 574 aa7.88□□□□□ -1.15
HMGB3P9-201ENST00000441799 ARID5BQ14865 1188 aa7.87□□□□□ -1.15
HMGB3P9-201ENST00000441799 DIXDC1Q155Q3 683 aa7.87□□□□□ -1.15
HMGB3P9-201ENST00000441799 ITPKCQ96DU7 683 aa7.87□□□□□ -1.15
HMGB3P9-201ENST00000441799 FAM181BA6NEQ2 426 aa7.86□□□□□ -1.15
HMGB3P9-201ENST00000441799 ZIC2O95409 532 aaPredicted RBP7.86□□□□□ -1.15
HMGB3P9-201ENST00000441799 VSIG8P0DPA2 414 aa7.86□□□□□ -1.15
HMGB3P9-201ENST00000441799 PRPF38BQ5VTL8 546 aaKnown RBP7.86□□□□□ -1.15
HMGB3P9-201ENST00000441799 NR5A1Q13285 461 aa7.85□□□□□ -1.15
HMGB3P9-201ENST00000441799 CSPP1Q1MSJ5 1256 aa7.85□□□□□ -1.15
HMGB3P9-201ENST00000441799 LIMD1Q9UGP4 676 aa7.85□□□□□ -1.15
HMGB3P9-201ENST00000441799 QPCTQ16769 361 aa7.84□□□□□ -1.15
HMGB3P9-201ENST00000441799 C6orf118Q5T5N4 469 aa7.83□□□□□ -1.16
HMGB3P9-201ENST00000441799 C1QTNF2Q9BXJ5 285 aa7.83□□□□□ -1.16
HMGB3P9-201ENST00000441799 LILRB3O75022 631 aa7.82□□□□□ -1.16
HMGB3P9-201ENST00000441799 MYSM1Q5VVJ2 828 aa7.82□□□□□ -1.16
HMGB3P9-201ENST00000441799 SH3RF1Q7Z6J0 888 aa7.82□□□□□ -1.16
HMGB3P9-201ENST00000441799 BPHLQ86WA6 291 aaPredicted RBP7.82□□□□□ -1.16
HMGB3P9-201ENST00000441799 AK7Q96M32 723 aa7.82□□□□□ -1.16
HMGB3P9-201ENST00000441799 PPFIA3O75145 1194 aa7.81□□□□□ -1.16
HMGB3P9-201ENST00000441799 RANGAP1P46060 587 aaPredicted RBP7.81□□□□□ -1.16
HMGB3P9-201ENST00000441799 AGERQ15109 404 aa7.81□□□□□ -1.16
HMGB3P9-201ENST00000441799 MAN1A2O60476 641 aa7.8□□□□□ -1.16
HMGB3P9-201ENST00000441799 EIF5BO60841 1220 aaKnown RBP7.8□□□□□ -1.16
HMGB3P9-201ENST00000441799 TUSC1Q2TAM9 212 aa7.8□□□□□ -1.16
HMGB3P9-201ENST00000441799 RTL5Q5HYW3 569 aaPredicted RBP7.8□□□□□ -1.16
HMGB3P9-201ENST00000441799 MEIOBQ8N635 442 aa7.8□□□□□ -1.16
HMGB3P9-201ENST00000441799 SOS2Q07890 1332 aaPredicted RBP7.79□□□□□ -1.16
HMGB3P9-201ENST00000441799 BMP2P12643 396 aa7.79□□□□□ -1.16
HMGB3P9-201ENST00000441799 SH3BP5LQ7L8J4 393 aa7.79□□□□□ -1.16
HMGB3P9-201ENST00000441799 LINC00528Q8N1L1 170 aa7.79□□□□□ -1.16
HMGB3P9-201ENST00000441799 DNMT3LQ9UJW3 386 aa7.79□□□□□ -1.16
HMGB3P9-201ENST00000441799 NUTM2BA6NNL0 878 aaPredicted RBP7.78□□□□□ -1.16
HMGB3P9-201ENST00000441799 NUTM2EB1AL46 878 aaPredicted RBP7.78□□□□□ -1.16
HMGB3P9-201ENST00000441799 NUTM2DQ5VT03 806 aaPredicted RBP7.78□□□□□ -1.16
HMGB3P9-201ENST00000441799 NUTM2AQ8IVF1 878 aaPredicted RBP7.78□□□□□ -1.16
HMGB3P9-201ENST00000441799 TSC1Q92574 1164 aa7.78□□□□□ -1.16
HMGB3P9-201ENST00000441799 PDE4DQ08499 809 aa7.77□□□□□ -1.17
HMGB3P9-201ENST00000441799 TRMT44Q8IYL2 757 aaKnown RBP7.77□□□□□ -1.17
HMGB3P9-201ENST00000441799 MAP4K5Q9Y4K4 846 aa7.77□□□□□ -1.17
HMGB3P9-201ENST00000441799 FSHRP23945 695 aa7.76□□□□□ -1.17
HMGB3P9-201ENST00000441799 GPR161Q8N6U8 529 aaKnown RBP7.76□□□□□ -1.17
HMGB3P9-201ENST00000441799 ARMC2Q8NEN0 867 aa7.76□□□□□ -1.17
HMGB3P9-201ENST00000441799 GSK3AP49840 483 aa7.75□□□□□ -1.17
HMGB3P9-201ENST00000441799 KRT76Q01546 638 aa7.75□□□□□ -1.17
HMGB3P9-201ENST00000441799 VASH1Q7L8A9 365 aaPredicted RBP7.75□□□□□ -1.17
HMGB3P9-201ENST00000441799 UPP2O95045 317 aa7.74□□□□□ -1.17
HMGB3P9-201ENST00000441799 MAGEB6P1A0A0J9YX57 407 aa7.73□□□□□ -1.17
HMGB3P9-201ENST00000441799 ERFEQ4G0M1 354 aa7.73□□□□□ -1.17
HMGB3P9-201ENST00000441799 NBPF14Q5TI25 921 aa7.73□□□□□ -1.17
HMGB3P9-201ENST00000441799 CCDC116Q8IYX3 515 aa7.73□□□□□ -1.17
HMGB3P9-201ENST00000441799 TSEN34Q9BSV6 310 aaKnown RBP7.73□□□□□ -1.17
HMGB3P9-201ENST00000441799 EMILIN1Q9Y6C2 1016 aa7.73□□□□□ -1.17
HMGB3P9-201ENST00000441799 LOC100996750A0A140TA64 210 aa7.72□□□□□ -1.17
HMGB3P9-201ENST00000441799 CTDSPL2Q05D32 466 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms