RNA–Protein interactions for RNA: ENST00000441778.6

LDB2-202, Transcript of LIM domain binding 2, humanhuman

TSL 1 (best) BASIC

Gene LDB2, Length 2,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-202ENST00000441778 ARHGEF28Q8N1W1 1705 aaKnown RBP11.27□□□□□ -0.6
LDB2-202ENST00000441778 ESPNB1AK53 854 aa11.27□□□□□ -0.61
LDB2-202ENST00000441778 NOB1Q9ULX3 412 aaKnown RBP11.27□□□□□ -0.61
LDB2-202ENST00000441778 TMEM132EQ6IEE7 984 aa11.27□□□□□ -0.61
LDB2-202ENST00000441778 ZBTB40Q9NUA8 1239 aa11.27□□□□□ -0.61
LDB2-202ENST00000441778 ISY1Q9ULR0 285 aaKnown RBP11.27□□□□□ -0.61
LDB2-202ENST00000441778 TRIM35Q9UPQ4 493 aa11.27□□□□□ -0.61
LDB2-202ENST00000441778 GLI2P10070 1586 aa11.26□□□□□ -0.61
LDB2-202ENST00000441778 FANCAO15360 1455 aa11.26□□□□□ -0.61
LDB2-202ENST00000441778 COL3A1P02461 1466 aaPredicted RBP11.26□□□□□ -0.61
LDB2-202ENST00000441778 PLEKHF1Q96S99 279 aa11.26□□□□□ -0.61
LDB2-202ENST00000441778 C14orf93Q9H972 538 aaKnown RBP11.26□□□□□ -0.61
LDB2-202ENST00000441778 ANKRD36BQ8N2N9 1353 aa11.26□□□□□ -0.61
LDB2-202ENST00000441778 TMPOP42166 694 aaKnown RBP11.26□□□□□ -0.61
LDB2-202ENST00000441778 NUCB1Q02818 461 aa11.26□□□□□ -0.61
LDB2-202ENST00000441778 NSD2O96028 1365 aa11.25□□□□□ -0.61
LDB2-202ENST00000441778 HSP90AA1P07900 732 aaKnown RBP11.25□□□□□ -0.61
LDB2-202ENST00000441778 CHGAP10645 457 aaKnown RBP11.25□□□□□ -0.61
LDB2-202ENST00000441778 RAB3GAP1Q15042 981 aa11.25□□□□□ -0.61
LDB2-202ENST00000441778 KIF2CQ99661 725 aa11.25□□□□□ -0.61
LDB2-202ENST00000441778 LNPKQ9C0E8 428 aa11.25□□□□□ -0.61
LDB2-202ENST00000441778 LMTK2Q8IWU2 1503 aa11.25□□□□□ -0.61
LDB2-202ENST00000441778 ABCC11Q96J66 1382 aa11.25□□□□□ -0.61
LDB2-202ENST00000441778 KIDINS220Q9ULH0 1771 aa11.25□□□□□ -0.61
LDB2-202ENST00000441778 AK9Q5TCS8 1911 aa11.25□□□□□ -0.61
LDB2-202ENST00000441778 CD2BP2O95400 341 aaKnown RBP11.25□□□□□ -0.61
LDB2-202ENST00000441778 HSP90AB1P08238 724 aaKnown RBP11.24□□□□□ -0.61
LDB2-202ENST00000441778 CIZ1Q9ULV3 898 aaPredicted RBP11.24□□□□□ -0.61
LDB2-202ENST00000441778 HSP90AA2PQ14568 343 aaPredicted RBP11.24□□□□□ -0.61
LDB2-202ENST00000441778 ANKRD26Q9UPS8 1709 aa11.23□□□□□ -0.61
LDB2-202ENST00000441778 U2SURPO15042 1029 aaKnown RBP11.23□□□□□ -0.61
LDB2-202ENST00000441778 RRP9O43818 475 aaKnown RBP11.23□□□□□ -0.61
LDB2-202ENST00000441778 CHD1LQ86WJ1 897 aa11.23□□□□□ -0.61
LDB2-202ENST00000441778 GBP4Q96PP9 640 aa11.23□□□□□ -0.61
LDB2-202ENST00000441778 FOXD4L1Q9NU39 408 aa11.23□□□□□ -0.61
LDB2-202ENST00000441778 CAMSAP1Q5T5Y3 1602 aa11.22□□□□□ -0.61
LDB2-202ENST00000441778 MED14O60244 1454 aa11.22□□□□□ -0.61
LDB2-202ENST00000441778 GLIPR1L2Q4G1C9 344 aa11.21□□□□□ -0.61
LDB2-202ENST00000441778 BMP2KLQ5H9B9 411 aa11.21□□□□□ -0.61
LDB2-202ENST00000441778 IL16Q14005 1332 aa11.21□□□□□ -0.61
LDB2-202ENST00000441778 KIF16BQ96L93 1317 aa11.21□□□□□ -0.61
LDB2-202ENST00000441778 NPATQ14207 1427 aa11.21□□□□□ -0.61
LDB2-202ENST00000441778 TRIM44Q96DX7 344 aaPredicted RBP11.21□□□□□ -0.61
LDB2-202ENST00000441778 CABP2Q9NPB3 220 aa11.21□□□□□ -0.61
LDB2-202ENST00000441778 EVC2Q86UK5 1308 aa11.21□□□□□ -0.62
LDB2-202ENST00000441778 A0A1W2PP64 1363 aa11.21□□□□□ -0.62
LDB2-202ENST00000441778 PPIP5K1Q6PFW1 1433 aa11.21□□□□□ -0.62
LDB2-202ENST00000441778 RBM42Q9BTD8 480 aaKnown RBP11.2□□□□□ -0.62
LDB2-202ENST00000441778 SSFA2P28290 1259 aa11.2□□□□□ -0.62
LDB2-202ENST00000441778 SKOR2Q2VWA4 1001 aaPredicted RBP11.2□□□□□ -0.62
LDB2-202ENST00000441778 K7ELQ4 463 aaPredicted RBP11.19□□□□□ -0.62
LDB2-202ENST00000441778 RIPK4P57078 832 aa11.19□□□□□ -0.62
LDB2-202ENST00000441778 GGNBP2Q9H3C7 697 aa11.19□□□□□ -0.62
LDB2-202ENST00000441778 IPO8O15397 1037 aaKnown RBP11.19□□□□□ -0.62
LDB2-202ENST00000441778 TBC1D9Q6ZT07 1266 aa11.19□□□□□ -0.62
LDB2-202ENST00000441778 GAS2L2Q8NHY3 880 aa11.19□□□□□ -0.62
LDB2-202ENST00000441778 PUS7Q96PZ0 661 aaKnown RBP11.19□□□□□ -0.62
LDB2-202ENST00000441778 VSIG10Q8N0Z9 540 aa11.18□□□□□ -0.62
LDB2-202ENST00000441778 PKNOX2Q96KN3 472 aa11.18□□□□□ -0.62
LDB2-202ENST00000441778 C1orf115Q9H7X2 142 aa11.18□□□□□ -0.62
LDB2-202ENST00000441778 LRRC7Q96NW7 1537 aa11.18□□□□□ -0.62
LDB2-202ENST00000441778 SIGLEC1Q9BZZ2 1709 aa11.18□□□□□ -0.62
LDB2-202ENST00000441778 ANKRD45Q5TZF3 282 aa11.18□□□□□ -0.62
LDB2-202ENST00000441778 PTMSP20962 102 aa11.17□□□□□ -0.62
LDB2-202ENST00000441778 ALDH1L2Q3SY69 923 aa11.17□□□□□ -0.62
LDB2-202ENST00000441778 NUTM2DQ5VT03 806 aaPredicted RBP11.17□□□□□ -0.62
LDB2-202ENST00000441778 SAFB2Q14151 953 aaKnown RBP eCLIP11.17□□□□□ -0.62
LDB2-202ENST00000441778 PPP1R9BQ96SB3 815 aa11.17□□□□□ -0.62
LDB2-202ENST00000441778 NEXMIFQ5QGS0 1516 aa11.17□□□□□ -0.62
LDB2-202ENST00000441778 HECW2Q9P2P5 1572 aa11.17□□□□□ -0.62
LDB2-202ENST00000441778 PIK3C2BO00750 1634 aa11.16□□□□□ -0.62
LDB2-202ENST00000441778 FRMPD1Q5SYB0 1578 aa11.16□□□□□ -0.62
LDB2-202ENST00000441778 ZBTB7BO15156 539 aaPredicted RBP11.16□□□□□ -0.62
LDB2-202ENST00000441778 CCDC173Q0VFZ6 552 aa11.16□□□□□ -0.62
LDB2-202ENST00000441778 ZMYND15Q9H091 742 aa11.16□□□□□ -0.62
LDB2-202ENST00000441778 NASPP49321 788 aaPredicted RBP11.16□□□□□ -0.62
LDB2-202ENST00000441778 CLEC17AQ6ZS10 378 aa11.16□□□□□ -0.62
LDB2-202ENST00000441778 KIF20BQ96Q89 1820 aa11.16□□□□□ -0.62
LDB2-202ENST00000441778 CD163L1Q9NR16 1453 aa11.15□□□□□ -0.62
LDB2-202ENST00000441778 PTCH1Q13635 1447 aa11.15□□□□□ -0.62
LDB2-202ENST00000441778 RPGRIP1LQ68CZ1 1315 aa11.15□□□□□ -0.62
LDB2-202ENST00000441778 BAG4O95429 457 aaKnown RBP11.15□□□□□ -0.62
LDB2-202ENST00000441778 TPM2P07951 284 aa11.15□□□□□ -0.62
LDB2-202ENST00000441778 SIRT2Q8IXJ6 389 aa11.15□□□□□ -0.62
LDB2-202ENST00000441778 GCC1Q96CN9 775 aa11.15□□□□□ -0.62
LDB2-202ENST00000441778 KNDC1Q76NI1 1749 aa11.15□□□□□ -0.62
LDB2-202ENST00000441778 CDC42BPGQ6DT37 1551 aa11.15□□□□□ -0.62
LDB2-202ENST00000441778 REREQ9P2R6 1566 aa11.15□□□□□ -0.62
LDB2-202ENST00000441778 ARHGAP31Q2M1Z3 1444 aa11.15□□□□□ -0.62
LDB2-202ENST00000441778 PIK3R4Q99570 1358 aa11.15□□□□□ -0.62
LDB2-202ENST00000441778 IBTKQ9P2D0 1353 aaPredicted RBP11.15□□□□□ -0.62
LDB2-202ENST00000441778 KLHL40Q2TBA0 621 aa11.15□□□□□ -0.62
LDB2-202ENST00000441778 FYB1O15117 783 aa11.14□□□□□ -0.63
LDB2-202ENST00000441778 BRPF1P55201 1214 aaPredicted RBP11.14□□□□□ -0.63
LDB2-202ENST00000441778 DIAPH1O60610 1272 aaKnown RBP11.14□□□□□ -0.63
LDB2-202ENST00000441778 KIAA1211Q6ZU35 1233 aa11.14□□□□□ -0.63
LDB2-202ENST00000441778 DDX49Q9Y6V7 483 aaKnown RBP11.14□□□□□ -0.63
LDB2-202ENST00000441778 CLTCQ00610 1675 aaKnown RBP11.14□□□□□ -0.63
LDB2-202ENST00000441778 PNPLA6Q8IY17 1366 aa11.13□□□□□ -0.63
LDB2-202ENST00000441778 ABCC3O15438 1527 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms