RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 U2SURPO15042 1029 aaKnown RBP7.9□□□□□ -1.14
VPS50-205ENST00000441602 KCNA6P17658 529 aa7.9□□□□□ -1.14
VPS50-205ENST00000441602 APAF1O14727 1248 aa7.9□□□□□ -1.14
VPS50-205ENST00000441602 RCAN3Q9UKA8 241 aa7.9□□□□□ -1.14
VPS50-205ENST00000441602 ACEP12821 1306 aa7.9□□□□□ -1.15
VPS50-205ENST00000441602 AATKQ6ZMQ8 1374 aa7.9□□□□□ -1.15
VPS50-205ENST00000441602 E9PSI1 815 aa7.9□□□□□ -1.15
VPS50-205ENST00000441602 CCDC146Q8IYE0 955 aa7.9□□□□□ -1.15
VPS50-205ENST00000441602 TTC21BQ7Z4L5 1316 aa7.89□□□□□ -1.15
VPS50-205ENST00000441602 PRR36Q9H6K5 1346 aa7.89□□□□□ -1.15
VPS50-205ENST00000441602 PPP4R2Q9NY27 417 aa7.89□□□□□ -1.15
VPS50-205ENST00000441602 NME9Q86XW9 330 aa7.88□□□□□ -1.15
VPS50-205ENST00000441602 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.88□□□□□ -1.15
VPS50-205ENST00000441602 USP6P35125 1406 aa7.88□□□□□ -1.15
VPS50-205ENST00000441602 NUTM2FA1L443 756 aa7.88□□□□□ -1.15
VPS50-205ENST00000441602 PPM1GO15355 546 aaPredicted RBP7.88□□□□□ -1.15
VPS50-205ENST00000441602 ADGRL3Q9HAR2 1447 aa7.88□□□□□ -1.15
VPS50-205ENST00000441602 MON2Q7Z3U7 1717 aa7.88□□□□□ -1.15
VPS50-205ENST00000441602 PROSER2Q86WR7 435 aaPredicted RBP7.87□□□□□ -1.15
VPS50-205ENST00000441602 WDR63Q8IWG1 891 aa7.87□□□□□ -1.15
VPS50-205ENST00000441602 AKAP12Q02952 1782 aa7.87□□□□□ -1.15
VPS50-205ENST00000441602 CALD1Q05682 793 aaKnown RBP7.87□□□□□ -1.15
VPS50-205ENST00000441602 CCDC27Q2M243 656 aa7.87□□□□□ -1.15
VPS50-205ENST00000441602 TCP11L2Q8N4U5 519 aa7.87□□□□□ -1.15
VPS50-205ENST00000441602 MYH16Q9H6N6 1097 aa7.87□□□□□ -1.15
VPS50-205ENST00000441602 NCKAP5LQ9HCH0 1330 aa7.87□□□□□ -1.15
VPS50-205ENST00000441602 CDK12Q9NYV4 1490 aaPredicted RBP7.87□□□□□ -1.15
VPS50-205ENST00000441602 TOPAZ1Q8N9V7 1692 aa7.86□□□□□ -1.15
VPS50-205ENST00000441602 SENP3-EIF4A1A0A087X0R7 540 aa7.86□□□□□ -1.15
VPS50-205ENST00000441602 FCHSD2O94868 740 aa7.86□□□□□ -1.15
VPS50-205ENST00000441602 PHF8Q9UPP1 1060 aa7.86□□□□□ -1.15
VPS50-205ENST00000441602 NKTRP30414 1462 aaKnown RBP7.86□□□□□ -1.15
VPS50-205ENST00000441602 RRP1P56182 461 aaKnown RBP7.86□□□□□ -1.15
VPS50-205ENST00000441602 SLFN5Q08AF3 891 aa7.86□□□□□ -1.15
VPS50-205ENST00000441602 RNF123Q5XPI4 1314 aa7.86□□□□□ -1.15
VPS50-205ENST00000441602 PNPLA6Q8IY17 1366 aa7.86□□□□□ -1.15
VPS50-205ENST00000441602 LMOD3Q0VAK6 560 aa7.86□□□□□ -1.15
VPS50-205ENST00000441602 POLKQ9UBT6 870 aa7.86□□□□□ -1.15
VPS50-205ENST00000441602 PMFBP1Q8TBY8 1022 aa7.85□□□□□ -1.15
VPS50-205ENST00000441602 CHD2O14647 1828 aaKnown RBP7.85□□□□□ -1.15
VPS50-205ENST00000441602 ZNF521Q96K83 1311 aa7.85□□□□□ -1.15
VPS50-205ENST00000441602 USP31Q70CQ4 1352 aa7.85□□□□□ -1.15
VPS50-205ENST00000441602 IRX6P78412 446 aaPredicted RBP7.84□□□□□ -1.15
VPS50-205ENST00000441602 CDCA7LQ96GN5 454 aa7.84□□□□□ -1.15
VPS50-205ENST00000441602 FMN2Q9NZ56 1722 aa7.84□□□□□ -1.15
VPS50-205ENST00000441602 NWD1Q149M9 1564 aa7.84□□□□□ -1.15
VPS50-205ENST00000441602 COL3A1P02461 1466 aaPredicted RBP7.84□□□□□ -1.15
VPS50-205ENST00000441602 SHPRHQ149N8 1683 aa7.84□□□□□ -1.15
VPS50-205ENST00000441602 NEUROD2Q15784 382 aa7.84□□□□□ -1.15
VPS50-205ENST00000441602 WWC1Q8IX03 1113 aa7.84□□□□□ -1.15
VPS50-205ENST00000441602 NCOA3Q9Y6Q9 1424 aa7.84□□□□□ -1.15
VPS50-205ENST00000441602 OVOS2A0A0J9YW53 1432 aa7.83□□□□□ -1.16
VPS50-205ENST00000441602 OVOS2Q6IE36 1432 aa7.83□□□□□ -1.16
VPS50-205ENST00000441602 IL16Q14005 1332 aa7.83□□□□□ -1.16
VPS50-205ENST00000441602 ATF3P18847 181 aa7.83□□□□□ -1.16
VPS50-205ENST00000441602 AMPHP49418 695 aa7.83□□□□□ -1.16
VPS50-205ENST00000441602 NLRP6P59044 892 aa7.83□□□□□ -1.16
VPS50-205ENST00000441602 PSME1Q06323 249 aa7.83□□□□□ -1.16
VPS50-205ENST00000441602 DUSP27Q5VZP5 1158 aa7.83□□□□□ -1.16
VPS50-205ENST00000441602 KIF24Q5T7B8 1368 aa7.83□□□□□ -1.16
VPS50-205ENST00000441602 PAK3O75914 559 aaPredicted RBP7.83□□□□□ -1.16
VPS50-205ENST00000441602 CT47B1P0C2W7 299 aaPredicted RBP7.83□□□□□ -1.16
VPS50-205ENST00000441602 EMILIN1Q9Y6C2 1016 aa7.83□□□□□ -1.16
VPS50-205ENST00000441602 IQSEC2Q5JU85 1478 aa7.82□□□□□ -1.16
VPS50-205ENST00000441602 ESCO1Q5FWF5 840 aa7.82□□□□□ -1.16
VPS50-205ENST00000441602 C19orf44Q9H6X5 657 aa7.82□□□□□ -1.16
VPS50-205ENST00000441602 CANXP27824 592 aaKnown RBP7.82□□□□□ -1.16
VPS50-205ENST00000441602 TMPOP42166 694 aaKnown RBP7.82□□□□□ -1.16
VPS50-205ENST00000441602 RRP7AQ9Y3A4 280 aaKnown RBP7.82□□□□□ -1.16
VPS50-205ENST00000441602 NRKQ7Z2Y5 1582 aa7.82□□□□□ -1.16
VPS50-205ENST00000441602 SSH2Q76I76 1423 aa7.82□□□□□ -1.16
VPS50-205ENST00000441602 PRKAR2BP31323 418 aa7.82□□□□□ -1.16
VPS50-205ENST00000441602 CCDC136Q96JN2 1154 aa7.82□□□□□ -1.16
VPS50-205ENST00000441602 ZRANB1Q9UGI0 708 aa7.82□□□□□ -1.16
VPS50-205ENST00000441602 LRRC7Q96NW7 1537 aa7.81□□□□□ -1.16
VPS50-205ENST00000441602 SBNO1A3KN83 1393 aa7.81□□□□□ -1.16
VPS50-205ENST00000441602 FLT4P35916 1363 aa7.81□□□□□ -1.16
VPS50-205ENST00000441602 MS4A1P11836 297 aa7.81□□□□□ -1.16
VPS50-205ENST00000441602 TRMT2AQ8IZ69 625 aaKnown RBP7.81□□□□□ -1.16
VPS50-205ENST00000441602 ABTB2Q8N961 1025 aa7.81□□□□□ -1.16
VPS50-205ENST00000441602 KCNH5Q8NCM2 988 aa7.81□□□□□ -1.16
VPS50-205ENST00000441602 IL13P35225 146 aa7.81□□□□□ -1.16
VPS50-205ENST00000441602 RIPK4P57078 832 aa7.81□□□□□ -1.16
VPS50-205ENST00000441602 RRS1Q15050 365 aaKnown RBP7.81□□□□□ -1.16
VPS50-205ENST00000441602 NFE2L2Q16236 605 aa7.81□□□□□ -1.16
VPS50-205ENST00000441602 DCCP43146 1447 aa7.8□□□□□ -1.16
VPS50-205ENST00000441602 CADPS2Q86UW7 1296 aa7.8□□□□□ -1.16
VPS50-205ENST00000441602 NALCNQ8IZF0 1738 aa7.8□□□□□ -1.16
VPS50-205ENST00000441602 RSPH6AQ9H0K4 717 aa7.8□□□□□ -1.16
VPS50-205ENST00000441602 RTL1A6NKG5 1358 aa7.79□□□□□ -1.16
VPS50-205ENST00000441602 MSH6P52701 1360 aa7.79□□□□□ -1.16
VPS50-205ENST00000441602 HAP1P54257 671 aaPredicted RBP7.79□□□□□ -1.16
VPS50-205ENST00000441602 PLEKHF1Q96S99 279 aa7.79□□□□□ -1.16
VPS50-205ENST00000441602 SOX12O15370 315 aa7.79□□□□□ -1.16
VPS50-205ENST00000441602 DMRT2Q9Y5R5 561 aa7.79□□□□□ -1.16
VPS50-205ENST00000441602 ARHGEF10O15013 1369 aa7.79□□□□□ -1.16
VPS50-205ENST00000441602 KIF1AQ12756 1690 aa7.78□□□□□ -1.16
VPS50-205ENST00000441602 MAP2P11137 1827 aaKnown RBP7.78□□□□□ -1.16
VPS50-205ENST00000441602 HMOX1P09601 288 aa7.78□□□□□ -1.16
VPS50-205ENST00000441602 GNAI1P63096 354 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms