RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 TMEM2Q9UHN6 1383 aa15.14■□□□□ 0.01
LTBR-203ENST00000441074 BCAR3O75815 825 aa15.14■□□□□ 0.01
LTBR-203ENST00000441074 LTKP29376 864 aa15.14■□□□□ 0.01
LTBR-203ENST00000441074 HSP90AA2PQ14568 343 aaPredicted RBP15.14■□□□□ 0.01
LTBR-203ENST00000441074 TXNDC2Q86VQ3 553 aa15.14■□□□□ 0.01
LTBR-203ENST00000441074 NINLQ9Y2I6 1382 aa15.13■□□□□ 0.01
LTBR-203ENST00000441074 TBC1D32Q96NH3 1257 aa15.13■□□□□ 0.01
LTBR-203ENST00000441074 UPF2Q9HAU5 1272 aaKnown RBP15.13■□□□□ 0.01
LTBR-203ENST00000441074 TNNT2P45379 298 aaPredicted RBP15.12■□□□□ 0.01
LTBR-203ENST00000441074 ZFYVE9O95405 1425 aa15.12■□□□□ 0.01
LTBR-203ENST00000441074 E9PSI1 815 aa15.12■□□□□ 0.01
LTBR-203ENST00000441074 MCM4P33991 863 aa15.12■□□□□ 0.01
LTBR-203ENST00000441074 ANKLE2Q86XL3 938 aa15.12■□□□□ 0.01
LTBR-203ENST00000441074 CLUAP1Q96AJ1 413 aa15.12■□□□□ 0.01
LTBR-203ENST00000441074 TBC1D2Q9BYX2 928 aa15.12■□□□□ 0.01
LTBR-203ENST00000441074 EID1Q9Y6B2 187 aa15.12■□□□□ 0.01
LTBR-203ENST00000441074 NCKAP5LQ9HCH0 1330 aa15.12■□□□□ 0.01
LTBR-203ENST00000441074 SRPK2P78362 688 aaKnown RBP15.11■□□□□ 0.01
LTBR-203ENST00000441074 VSIG10Q8N0Z9 540 aa15.11■□□□□ 0.01
LTBR-203ENST00000441074 METP08581 1390 aa15.11■□□□□ 0.01
LTBR-203ENST00000441074 SETBP1Q9Y6X0 1596 aa15.11■□□□□ 0.01
LTBR-203ENST00000441074 ZMYND15Q9H091 742 aa15.11■□□□□ 0.01
LTBR-203ENST00000441074 SPINK5Q9NQ38 1064 aaPredicted RBP15.11■□□□□ 0.01
LTBR-203ENST00000441074 SLC26A8Q96RN1 970 aa15.1■□□□□ 0.01
LTBR-203ENST00000441074 YTHDC2Q9H6S0 1430 aaKnown RBP15.1■□□□□ 0.01
LTBR-203ENST00000441074 HDGFP51858 240 aaKnown RBP15.1■□□□□ 0.01
LTBR-203ENST00000441074 KCNA4P22459 653 aa15.09■□□□□ 0.01
LTBR-203ENST00000441074 MRE11P49959 708 aa15.09■□□□□ 0.01
LTBR-203ENST00000441074 PANK2Q9BZ23 570 aa15.09■□□□□ 0.01
LTBR-203ENST00000441074 SBNO2Q9Y2G9 1366 aa15.09■□□□□ 0.01
LTBR-203ENST00000441074 AAMPQ13685 434 aa15.09■□□□□ 0.01
LTBR-203ENST00000441074 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.09■□□□□ 0.01
LTBR-203ENST00000441074 ALKQ9UM73 1620 aa15.09■□□□□ 0.01
LTBR-203ENST00000441074 SLIT1O75093 1534 aa15.08■□□□□ 0.01
LTBR-203ENST00000441074 ARHGAP23Q9P227 1491 aa15.08■□□□□ 0.01
LTBR-203ENST00000441074 EVC2Q86UK5 1308 aa15.08■□□□□ 0
LTBR-203ENST00000441074 APAF1O14727 1248 aa15.07■□□□□ 0
LTBR-203ENST00000441074 PMFBP1Q8TBY8 1022 aa15.07■□□□□ 0
LTBR-203ENST00000441074 ARXQ96QS3 562 aa15.06■□□□□ 0
LTBR-203ENST00000441074 TRAK2O60296 914 aa15.06■□□□□ 0
LTBR-203ENST00000441074 CCDC146Q8IYE0 955 aa15.06■□□□□ 0
LTBR-203ENST00000441074 CHMP5Q9NZZ3 219 aa15.06■□□□□ 0
LTBR-203ENST00000441074 ISY1Q9ULR0 285 aaKnown RBP15.06■□□□□ 0
LTBR-203ENST00000441074 POLR3AO14802 1390 aaPredicted RBP15.06■□□□□ 0
LTBR-203ENST00000441074 COG6Q9Y2V7 657 aa15.05■□□□□ 0
LTBR-203ENST00000441074 TULP4Q9NRJ4 1543 aa15.05■□□□□ 0
LTBR-203ENST00000441074 CDK19Q9BWU1 502 aa15.05■□□□□ -0
LTBR-203ENST00000441074 GZF1Q9H116 711 aaPredicted RBP15.05■□□□□ -0
LTBR-203ENST00000441074 QRICH2Q9H0J4 1663 aa15.04■□□□□ -0
LTBR-203ENST00000441074 PANK1Q8TE04 598 aa15.04■□□□□ -0
LTBR-203ENST00000441074 NSD3Q9BZ95 1437 aa15.04■□□□□ -0
LTBR-203ENST00000441074 STRCQ7RTU9 1775 aa15.03■□□□□ -0
LTBR-203ENST00000441074 NUTM2FA1L443 756 aa15.03■□□□□ -0
LTBR-203ENST00000441074 ESPNB1AK53 854 aa15.03■□□□□ -0
LTBR-203ENST00000441074 CANXP27824 592 aaKnown RBP15.03■□□□□ -0
LTBR-203ENST00000441074 MYH16Q9H6N6 1097 aa15.03■□□□□ -0
LTBR-203ENST00000441074 CABP1Q9NZU7 370 aa15.03■□□□□ -0
LTBR-203ENST00000441074 GRPEL1Q9HAV7 217 aa15.02■□□□□ -0
LTBR-203ENST00000441074 ARHGEF28Q8N1W1 1705 aaKnown RBP15.02□□□□□ -0.01
LTBR-203ENST00000441074 PDZRN3Q9UPQ7 1066 aa15.01□□□□□ -0.01
LTBR-203ENST00000441074 NPHP4O75161 1426 aaPredicted RBP15.01□□□□□ -0.01
LTBR-203ENST00000441074 PLEKHG1Q9ULL1 1385 aa15.01□□□□□ -0.01
LTBR-203ENST00000441074 DMRT2Q9Y5R5 561 aa15.01□□□□□ -0.01
LTBR-203ENST00000441074 DDX11L8A8MPP1 907 aa15□□□□□ -0.01
LTBR-203ENST00000441074 USP32Q8NFA0 1604 aa15□□□□□ -0.01
LTBR-203ENST00000441074 MED14O60244 1454 aa14.99□□□□□ -0.01
LTBR-203ENST00000441074 SPRYD3Q8NCJ5 442 aa14.99□□□□□ -0.01
LTBR-203ENST00000441074 PCDHB15Q9Y5E8 787 aa14.99□□□□□ -0.01
LTBR-203ENST00000441074 MORC1Q86VD1 984 aa14.99□□□□□ -0.01
LTBR-203ENST00000441074 GGNBP2Q9H3C7 697 aa14.99□□□□□ -0.01
LTBR-203ENST00000441074 TPM2P07951 284 aa14.98□□□□□ -0.01
LTBR-203ENST00000441074 FBLN1P23142 703 aa14.98□□□□□ -0.01
LTBR-203ENST00000441074 RWDD1Q9H446 243 aaPredicted RBP14.98□□□□□ -0.01
LTBR-203ENST00000441074 SHPRHQ149N8 1683 aa14.98□□□□□ -0.01
LTBR-203ENST00000441074 A0A1W2PP64 1363 aa14.98□□□□□ -0.01
LTBR-203ENST00000441074 RBM33Q96EV2 1170 aaKnown RBP14.98□□□□□ -0.01
LTBR-203ENST00000441074 IQSEC2Q5JU85 1478 aa14.97□□□□□ -0.01
LTBR-203ENST00000441074 NRXN3Q9Y4C0 1643 aa14.97□□□□□ -0.01
LTBR-203ENST00000441074 C22orf23Q9BZE7 217 aa14.97□□□□□ -0.01
LTBR-203ENST00000441074 ERBB4Q15303 1308 aa14.97□□□□□ -0.01
LTBR-203ENST00000441074 ROBO2Q9HCK4 1378 aa14.97□□□□□ -0.01
LTBR-203ENST00000441074 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.97□□□□□ -0.01
LTBR-203ENST00000441074 WWC1Q8IX03 1113 aa14.97□□□□□ -0.01
LTBR-203ENST00000441074 ABCC11Q96J66 1382 aa14.97□□□□□ -0.01
LTBR-203ENST00000441074 ADAMTS13Q76LX8 1427 aa14.97□□□□□ -0.01
LTBR-203ENST00000441074 RARSP54136 660 aaKnown RBP14.96□□□□□ -0.01
LTBR-203ENST00000441074 NCBP3Q53F19 620 aaKnown RBP14.96□□□□□ -0.01
LTBR-203ENST00000441074 ZNF692Q9BU19 519 aaPredicted RBP14.95□□□□□ -0.02
LTBR-203ENST00000441074 TBX22Q9Y458 520 aa14.95□□□□□ -0.02
LTBR-203ENST00000441074 TRIM44Q96DX7 344 aaPredicted RBP14.95□□□□□ -0.02
LTBR-203ENST00000441074 RUNDC1Q96C34 613 aa14.94□□□□□ -0.02
LTBR-203ENST00000441074 ANKRD36BQ8N2N9 1353 aa14.94□□□□□ -0.02
LTBR-203ENST00000441074 WASLO00401 505 aaPredicted RBP14.94□□□□□ -0.02
LTBR-203ENST00000441074 AMOTL2Q9Y2J4 779 aa14.94□□□□□ -0.02
LTBR-203ENST00000441074 HSCBQ8IWL3 235 aa14.93□□□□□ -0.02
LTBR-203ENST00000441074 PDCL3Q9H2J4 239 aa14.93□□□□□ -0.02
LTBR-203ENST00000441074 RLBP1P12271 317 aa14.93□□□□□ -0.02
LTBR-203ENST00000441074 DDIT3P35638 169 aa14.93□□□□□ -0.02
LTBR-203ENST00000441074 MTHFSP49914 203 aa14.93□□□□□ -0.02
LTBR-203ENST00000441074 WDR63Q8IWG1 891 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms