RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 MYH16Q9H6N6 1097 aa10.66□□□□□ -0.7
SPIRE1-204ENST00000440472 PLEKHG1Q9ULL1 1385 aa10.65□□□□□ -0.7
SPIRE1-204ENST00000440472 AKAP12Q02952 1782 aa10.65□□□□□ -0.7
SPIRE1-204ENST00000440472 DMRT2Q9Y5R5 561 aa10.65□□□□□ -0.7
SPIRE1-204ENST00000440472 SLIT1O75093 1534 aa10.64□□□□□ -0.71
SPIRE1-204ENST00000440472 BACH2Q9BYV9 841 aa10.64□□□□□ -0.71
SPIRE1-204ENST00000440472 CABP1Q9NZU7 370 aa10.64□□□□□ -0.71
SPIRE1-204ENST00000440472 METP08581 1390 aa10.64□□□□□ -0.71
SPIRE1-204ENST00000440472 ARHGAP23Q9P227 1491 aa10.64□□□□□ -0.71
SPIRE1-204ENST00000440472 ADAMTS13Q76LX8 1427 aa10.64□□□□□ -0.71
SPIRE1-204ENST00000440472 SAFB2Q14151 953 aaKnown RBP eCLIP10.64□□□□□ -0.71
SPIRE1-204ENST00000440472 U2AF1L5P0DN76 240 aaPredicted RBP10.63□□□□□ -0.71
SPIRE1-204ENST00000440472 RARSP54136 660 aaKnown RBP10.63□□□□□ -0.71
SPIRE1-204ENST00000440472 U2AF1Q01081 240 aaKnown RBP eCLIP10.63□□□□□ -0.71
SPIRE1-204ENST00000440472 GGNBP2Q9H3C7 697 aa10.63□□□□□ -0.71
SPIRE1-204ENST00000440472 CDK12Q9NYV4 1490 aaPredicted RBP10.63□□□□□ -0.71
SPIRE1-204ENST00000440472 FCHSD2O94868 740 aa10.63□□□□□ -0.71
SPIRE1-204ENST00000440472 TNNT2P45379 298 aaPredicted RBP10.63□□□□□ -0.71
SPIRE1-204ENST00000440472 ZNF692Q9BU19 519 aaPredicted RBP10.63□□□□□ -0.71
SPIRE1-204ENST00000440472 C3P01024 1663 aa10.62□□□□□ -0.71
SPIRE1-204ENST00000440472 DIP2AQ14689 1571 aa10.62□□□□□ -0.71
SPIRE1-204ENST00000440472 DIAPH1O60610 1272 aaKnown RBP10.62□□□□□ -0.71
SPIRE1-204ENST00000440472 PDE4AP27815 886 aa10.62□□□□□ -0.71
SPIRE1-204ENST00000440472 ANP32AP39687 249 aaKnown RBP10.62□□□□□ -0.71
SPIRE1-204ENST00000440472 PPIP5K1Q6PFW1 1433 aa10.62□□□□□ -0.71
SPIRE1-204ENST00000440472 TOPAZ1Q8N9V7 1692 aa10.62□□□□□ -0.71
SPIRE1-204ENST00000440472 BCAR3O75815 825 aa10.61□□□□□ -0.71
SPIRE1-204ENST00000440472 TMPOP42166 694 aaKnown RBP10.61□□□□□ -0.71
SPIRE1-204ENST00000440472 CCDC61Q9Y6R9 512 aa10.61□□□□□ -0.71
SPIRE1-204ENST00000440472 MLECQ14165 292 aa10.61□□□□□ -0.71
SPIRE1-204ENST00000440472 ITSN1Q15811 1721 aa10.61□□□□□ -0.71
SPIRE1-204ENST00000440472 WAPLQ7Z5K2 1190 aa10.61□□□□□ -0.71
SPIRE1-204ENST00000440472 IPO9Q96P70 1041 aaKnown RBP10.61□□□□□ -0.71
SPIRE1-204ENST00000440472 ZNF428Q96B54 188 aa10.6□□□□□ -0.71
SPIRE1-204ENST00000440472 POLKQ9UBT6 870 aa10.6□□□□□ -0.71
SPIRE1-204ENST00000440472 TRIM35Q9UPQ4 493 aa10.6□□□□□ -0.71
SPIRE1-204ENST00000440472 MAPK8IP3Q9UPT6 1336 aa10.59□□□□□ -0.71
SPIRE1-204ENST00000440472 MAP2P11137 1827 aaKnown RBP10.59□□□□□ -0.71
SPIRE1-204ENST00000440472 PTCH1Q13635 1447 aa10.59□□□□□ -0.71
SPIRE1-204ENST00000440472 PLEKHG3A1L390 1219 aa10.59□□□□□ -0.71
SPIRE1-204ENST00000440472 NUDT16Q96DE0 195 aaKnown RBP10.59□□□□□ -0.71
SPIRE1-204ENST00000440472 NRKQ7Z2Y5 1582 aa10.59□□□□□ -0.71
SPIRE1-204ENST00000440472 BRPF1P55201 1214 aaPredicted RBP10.58□□□□□ -0.72
SPIRE1-204ENST00000440472 CLUAP1Q96AJ1 413 aa10.58□□□□□ -0.72
SPIRE1-204ENST00000440472 LRRC7Q96NW7 1537 aa10.57□□□□□ -0.72
SPIRE1-204ENST00000440472 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.57□□□□□ -0.72
SPIRE1-204ENST00000440472 PMFBP1Q8TBY8 1022 aa10.57□□□□□ -0.72
SPIRE1-204ENST00000440472 RSPH6AQ9H0K4 717 aa10.57□□□□□ -0.72
SPIRE1-204ENST00000440472 NOP58Q9Y2X3 529 aaKnown RBP10.57□□□□□ -0.72
SPIRE1-204ENST00000440472 RRP7AQ9Y3A4 280 aaKnown RBP10.57□□□□□ -0.72
SPIRE1-204ENST00000440472 TBX22Q9Y458 520 aa10.57□□□□□ -0.72
SPIRE1-204ENST00000440472 ROBO2Q9HCK4 1378 aa10.57□□□□□ -0.72
SPIRE1-204ENST00000440472 RIMS1Q86UR5 1692 aaKnown RBP10.57□□□□□ -0.72
SPIRE1-204ENST00000440472 CALD1Q05682 793 aaKnown RBP10.57□□□□□ -0.72
SPIRE1-204ENST00000440472 NALCNQ8IZF0 1738 aa10.56□□□□□ -0.72
SPIRE1-204ENST00000440472 IL13P35225 146 aa10.56□□□□□ -0.72
SPIRE1-204ENST00000440472 ERICH6Q7L0X2 663 aa10.56□□□□□ -0.72
SPIRE1-204ENST00000440472 TXNDC2Q86VQ3 553 aa10.56□□□□□ -0.72
SPIRE1-204ENST00000440472 CERKQ8TCT0 537 aa10.56□□□□□ -0.72
SPIRE1-204ENST00000440472 PIK3R4Q99570 1358 aa10.56□□□□□ -0.72
SPIRE1-204ENST00000440472 FER1L4A9Z1Z3 1794 aa10.55□□□□□ -0.72
SPIRE1-204ENST00000440472 SSH2Q76I76 1423 aa10.55□□□□□ -0.72
SPIRE1-204ENST00000440472 U2SURPO15042 1029 aaKnown RBP10.55□□□□□ -0.72
SPIRE1-204ENST00000440472 NEUROD2Q15784 382 aa10.55□□□□□ -0.72
SPIRE1-204ENST00000440472 ALDH1L2Q3SY69 923 aa10.55□□□□□ -0.72
SPIRE1-204ENST00000440472 FAM161AQ3B820 660 aa10.55□□□□□ -0.72
SPIRE1-204ENST00000440472 EID1Q9Y6B2 187 aa10.55□□□□□ -0.72
SPIRE1-204ENST00000440472 OVOS2A0A0J9YW53 1432 aa10.54□□□□□ -0.72
SPIRE1-204ENST00000440472 OVOS2Q6IE36 1432 aa10.54□□□□□ -0.72
SPIRE1-204ENST00000440472 USP31Q70CQ4 1352 aa10.54□□□□□ -0.72
SPIRE1-204ENST00000440472 PRR36Q9H6K5 1346 aa10.54□□□□□ -0.72
SPIRE1-204ENST00000440472 CANXP27824 592 aaKnown RBP10.54□□□□□ -0.72
SPIRE1-204ENST00000440472 RIPK4P57078 832 aa10.54□□□□□ -0.72
SPIRE1-204ENST00000440472 NFE2L2Q16236 605 aa10.54□□□□□ -0.72
SPIRE1-204ENST00000440472 ZKSCAN2Q63HK3 967 aa10.54□□□□□ -0.72
SPIRE1-204ENST00000440472 COG3Q96JB2 828 aa10.54□□□□□ -0.72
SPIRE1-204ENST00000440472 PTPRUQ92729 1446 aa10.54□□□□□ -0.72
SPIRE1-204ENST00000440472 VIRMAQ69YN4 1812 aaKnown RBP10.54□□□□□ -0.72
SPIRE1-204ENST00000440472 XRN1Q8IZH2 1706 aaKnown RBP10.54□□□□□ -0.72
SPIRE1-204ENST00000440472 NEFMP07197 916 aa10.54□□□□□ -0.72
SPIRE1-204ENST00000440472 LTKP29376 864 aa10.54□□□□□ -0.72
SPIRE1-204ENST00000440472 LMOD3Q0VAK6 560 aa10.53□□□□□ -0.72
SPIRE1-204ENST00000440472 DDRGK1Q96HY6 314 aa10.53□□□□□ -0.72
SPIRE1-204ENST00000440472 USP54Q70EL1 1684 aa10.53□□□□□ -0.72
SPIRE1-204ENST00000440472 TTC21AQ8NDW8 1320 aa10.53□□□□□ -0.72
SPIRE1-204ENST00000440472 MVPQ14764 893 aaKnown RBP10.52□□□□□ -0.72
SPIRE1-204ENST00000440472 THEMISQ8N1K5 641 aaPredicted RBP10.52□□□□□ -0.72
SPIRE1-204ENST00000440472 PANK1Q8TE04 598 aa10.52□□□□□ -0.72
SPIRE1-204ENST00000440472 ZBTB47Q9UFB7 747 aaPredicted RBP10.52□□□□□ -0.72
SPIRE1-204ENST00000440472 USP6P35125 1406 aa10.52□□□□□ -0.73
SPIRE1-204ENST00000440472 ANKARQ7Z5J8 1434 aa10.52□□□□□ -0.73
SPIRE1-204ENST00000440472 TTC21BQ7Z4L5 1316 aa10.52□□□□□ -0.73
SPIRE1-204ENST00000440472 KIF16BQ96L93 1317 aa10.52□□□□□ -0.73
SPIRE1-204ENST00000440472 ZNF853P0CG23 659 aa10.52□□□□□ -0.73
SPIRE1-204ENST00000440472 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.52□□□□□ -0.73
SPIRE1-204ENST00000440472 COG6Q9Y2V7 657 aa10.52□□□□□ -0.73
SPIRE1-204ENST00000440472 IPO8O15397 1037 aaKnown RBP10.51□□□□□ -0.73
SPIRE1-204ENST00000440472 IGHDP01880 384 aa10.51□□□□□ -0.73
SPIRE1-204ENST00000440472 EXOSC9Q06265 439 aaKnown RBP10.51□□□□□ -0.73
SPIRE1-204ENST00000440472 C8orf34Q49A92 452 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms