RNA–Protein interactions for RNA: ENST00000439732.6

SMARCA2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 755 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-213ENST00000439732 ABTB2Q8N961 1025 aa13.23□□□□□ -0.29
SMARCA2-213ENST00000439732 KTN1Q86UP2 1357 aaKnown RBP13.22□□□□□ -0.29
SMARCA2-213ENST00000439732 NLRP13Q86W25 1043 aa13.22□□□□□ -0.29
SMARCA2-213ENST00000439732 USP6P35125 1406 aa13.22□□□□□ -0.29
SMARCA2-213ENST00000439732 CPSF1Q10570 1443 aaKnown RBP13.22□□□□□ -0.29
SMARCA2-213ENST00000439732 TTC21AQ8NDW8 1320 aa13.21□□□□□ -0.29
SMARCA2-213ENST00000439732 MED1Q15648 1581 aaPredicted RBP13.21□□□□□ -0.29
SMARCA2-213ENST00000439732 ADAMTS2O95450 1211 aa13.21□□□□□ -0.29
SMARCA2-213ENST00000439732 TRPM3Q9HCF6 1732 aaPredicted RBP13.21□□□□□ -0.3
SMARCA2-213ENST00000439732 COL22A1Q8NFW1 1626 aaPredicted RBP13.21□□□□□ -0.3
SMARCA2-213ENST00000439732 TTC21BQ7Z4L5 1316 aa13.2□□□□□ -0.3
SMARCA2-213ENST00000439732 NGLY1Q96IV0 654 aa13.2□□□□□ -0.3
SMARCA2-213ENST00000439732 NLRP6P59044 892 aa13.19□□□□□ -0.3
SMARCA2-213ENST00000439732 CABLES1Q8TDN4 633 aa13.19□□□□□ -0.3
SMARCA2-213ENST00000439732 C8orf37Q96NL8 207 aa13.19□□□□□ -0.3
SMARCA2-213ENST00000439732 POLR3GLQ9BT43 218 aa13.19□□□□□ -0.3
SMARCA2-213ENST00000439732 ALS2Q96Q42 1657 aa13.18□□□□□ -0.3
SMARCA2-213ENST00000439732 AKAP12Q02952 1782 aa13.18□□□□□ -0.3
SMARCA2-213ENST00000439732 PLEKHG5O94827 1062 aa13.18□□□□□ -0.3
SMARCA2-213ENST00000439732 NUTM2GQ5VZR2 741 aa13.18□□□□□ -0.3
SMARCA2-213ENST00000439732 ZNF772Q68DY9 489 aaPredicted RBP13.18□□□□□ -0.3
SMARCA2-213ENST00000439732 SSH2Q76I76 1423 aa13.17□□□□□ -0.3
SMARCA2-213ENST00000439732 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.17□□□□□ -0.3
SMARCA2-213ENST00000439732 ANKRD36BQ8N2N9 1353 aa13.17□□□□□ -0.3
SMARCA2-213ENST00000439732 LRP6O75581 1613 aa13.17□□□□□ -0.3
SMARCA2-213ENST00000439732 EDC4Q6P2E9 1401 aaKnown RBP13.16□□□□□ -0.3
SMARCA2-213ENST00000439732 A0A1W2PP64 1363 aa13.16□□□□□ -0.3
SMARCA2-213ENST00000439732 CD163L1Q9NR16 1453 aa13.16□□□□□ -0.3
SMARCA2-213ENST00000439732 GCP02774 474 aa13.15□□□□□ -0.3
SMARCA2-213ENST00000439732 FNBP4Q8N3X1 1017 aaPredicted RBP13.15□□□□□ -0.3
SMARCA2-213ENST00000439732 KCNH5Q8NCM2 988 aa13.15□□□□□ -0.3
SMARCA2-213ENST00000439732 AFF2P51816 1311 aa13.14□□□□□ -0.31
SMARCA2-213ENST00000439732 C11orf95C9JLR9 678 aaPredicted RBP13.14□□□□□ -0.31
SMARCA2-213ENST00000439732 USP19O94966 1318 aa13.13□□□□□ -0.31
SMARCA2-213ENST00000439732 MON2Q7Z3U7 1717 aa13.13□□□□□ -0.31
SMARCA2-213ENST00000439732 FAM83GA6ND36 823 aa13.13□□□□□ -0.31
SMARCA2-213ENST00000439732 PRDM11Q9NQV5 511 aa13.13□□□□□ -0.31
SMARCA2-213ENST00000439732 USP21Q9UK80 565 aa13.13□□□□□ -0.31
SMARCA2-213ENST00000439732 MARF1Q9Y4F3 1742 aaKnown RBP13.13□□□□□ -0.31
SMARCA2-213ENST00000439732 USP31Q70CQ4 1352 aa13.12□□□□□ -0.31
SMARCA2-213ENST00000439732 ZC3H6P61129 1189 aaKnown RBP13.12□□□□□ -0.31
SMARCA2-213ENST00000439732 NME9Q86XW9 330 aa13.12□□□□□ -0.31
SMARCA2-213ENST00000439732 QTRT2Q9H974 415 aaKnown RBP13.12□□□□□ -0.31
SMARCA2-213ENST00000439732 RGS17Q9UGC6 210 aaPredicted RBP13.12□□□□□ -0.31
SMARCA2-213ENST00000439732 KIF7Q2M1P5 1343 aa13.12□□□□□ -0.31
SMARCA2-213ENST00000439732 UNC5CLQ8IV45 518 aa13.11□□□□□ -0.31
SMARCA2-213ENST00000439732 COG3Q96JB2 828 aa13.11□□□□□ -0.31
SMARCA2-213ENST00000439732 PANK3Q9H999 370 aa13.11□□□□□ -0.31
SMARCA2-213ENST00000439732 TRPC5Q9UL62 973 aaPredicted RBP13.11□□□□□ -0.31
SMARCA2-213ENST00000439732 CPDO75976 1380 aa13.1□□□□□ -0.31
SMARCA2-213ENST00000439732 CARD14Q9BXL6 1004 aa13.1□□□□□ -0.31
SMARCA2-213ENST00000439732 CGNL1Q0VF96 1302 aa13.1□□□□□ -0.31
SMARCA2-213ENST00000439732 KIAA0232Q92628 1395 aa13.09□□□□□ -0.31
SMARCA2-213ENST00000439732 FYB1O15117 783 aa13.09□□□□□ -0.31
SMARCA2-213ENST00000439732 RXRBP28702 533 aa13.09□□□□□ -0.31
SMARCA2-213ENST00000439732 POTEAQ6S8J7 498 aa13.09□□□□□ -0.31
SMARCA2-213ENST00000439732 PIK3C2AO00443 1686 aa13.08□□□□□ -0.31
SMARCA2-213ENST00000439732 ABCA3Q99758 1704 aa13.08□□□□□ -0.32
SMARCA2-213ENST00000439732 NRKQ7Z2Y5 1582 aa13.08□□□□□ -0.32
SMARCA2-213ENST00000439732 BTG4Q9NY30 223 aa13.08□□□□□ -0.32
SMARCA2-213ENST00000439732 ZRANB1Q9UGI0 708 aa13.08□□□□□ -0.32
SMARCA2-213ENST00000439732 KNSTRNQ9Y448 316 aa13.08□□□□□ -0.32
SMARCA2-213ENST00000439732 CCDC7Q96M83 1385 aa13.07□□□□□ -0.32
SMARCA2-213ENST00000439732 EVA1CP58658 441 aa13.07□□□□□ -0.32
SMARCA2-213ENST00000439732 RBM6P78332 1123 aaKnown RBP13.07□□□□□ -0.32
SMARCA2-213ENST00000439732 CHRNA2Q15822 529 aa13.07□□□□□ -0.32
SMARCA2-213ENST00000439732 MYOM1P52179 1685 aa13.07□□□□□ -0.32
SMARCA2-213ENST00000439732 CRYBG1Q9Y4K1 1723 aa13.07□□□□□ -0.32
SMARCA2-213ENST00000439732 SLIT2O94813 1529 aa13.07□□□□□ -0.32
SMARCA2-213ENST00000439732 COL14A1Q05707 1796 aaKnown RBP13.07□□□□□ -0.32
SMARCA2-213ENST00000439732 PHRF1Q9P1Y6 1649 aaKnown RBP13.06□□□□□ -0.32
SMARCA2-213ENST00000439732 NSD3Q9BZ95 1437 aa13.06□□□□□ -0.32
SMARCA2-213ENST00000439732 BCL9LQ86UU0 1499 aa13.06□□□□□ -0.32
SMARCA2-213ENST00000439732 ZBTB7CA1YPR0 619 aa13.06□□□□□ -0.32
SMARCA2-213ENST00000439732 SOX12O15370 315 aa13.06□□□□□ -0.32
SMARCA2-213ENST00000439732 VPS72Q15906 364 aa13.06□□□□□ -0.32
SMARCA2-213ENST00000439732 ARHGEF25Q86VW2 580 aa13.06□□□□□ -0.32
SMARCA2-213ENST00000439732 GGNBP2Q9H3C7 697 aa13.06□□□□□ -0.32
SMARCA2-213ENST00000439732 SLIT3O75094 1523 aa13.06□□□□□ -0.32
SMARCA2-213ENST00000439732 WASHC2AQ641Q2 1341 aa13.06□□□□□ -0.32
SMARCA2-213ENST00000439732 AATKQ6ZMQ8 1374 aa13.06□□□□□ -0.32
SMARCA2-213ENST00000439732 NWD2Q9ULI1 1742 aa13.05□□□□□ -0.32
SMARCA2-213ENST00000439732 GJD4Q96KN9 370 aaPredicted RBP13.04□□□□□ -0.32
SMARCA2-213ENST00000439732 CCDC9Q9Y3X0 531 aaKnown RBP13.04□□□□□ -0.32
SMARCA2-213ENST00000439732 USP54Q70EL1 1684 aa13.04□□□□□ -0.32
SMARCA2-213ENST00000439732 OVOS2A0A0J9YW53 1432 aa13.04□□□□□ -0.32
SMARCA2-213ENST00000439732 ATRNO75882 1429 aa13.04□□□□□ -0.32
SMARCA2-213ENST00000439732 OVOS2Q6IE36 1432 aa13.04□□□□□ -0.32
SMARCA2-213ENST00000439732 STRN4Q9NRL3 753 aa13.02□□□□□ -0.33
SMARCA2-213ENST00000439732 NSD2O96028 1365 aa13.02□□□□□ -0.33
SMARCA2-213ENST00000439732 PLCH1Q4KWH8 1693 aa13.02□□□□□ -0.33
SMARCA2-213ENST00000439732 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.02□□□□□ -0.33
SMARCA2-213ENST00000439732 AMPHP49418 695 aa13.01□□□□□ -0.33
SMARCA2-213ENST00000439732 NFAT5O94916 1531 aa13.01□□□□□ -0.33
SMARCA2-213ENST00000439732 KIF20BQ96Q89 1820 aa13.01□□□□□ -0.33
SMARCA2-213ENST00000439732 PER1O15534 1290 aaPredicted RBP13□□□□□ -0.33
SMARCA2-213ENST00000439732 ILDR2Q71H61 639 aa13□□□□□ -0.33
SMARCA2-213ENST00000439732 MORC1Q86VD1 984 aa13□□□□□ -0.33
SMARCA2-213ENST00000439732 IP6K1Q92551 441 aa13□□□□□ -0.33
SMARCA2-213ENST00000439732 CAMTA1Q9Y6Y1 1673 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms