RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 NRKQ7Z2Y5 1582 aa15.51■□□□□ 0.07
SMAD3-202ENST00000439724 PRR36Q9H6K5 1346 aa15.51■□□□□ 0.07
SMAD3-202ENST00000439724 AMOTL2Q9Y2J4 779 aa15.49■□□□□ 0.07
SMAD3-202ENST00000439724 SETD1BQ9UPS6 1966 aaKnown RBP15.49■□□□□ 0.07
SMAD3-202ENST00000439724 ZNF692Q9BU19 519 aaPredicted RBP15.48■□□□□ 0.07
SMAD3-202ENST00000439724 E9PSI1 815 aa15.48■□□□□ 0.07
SMAD3-202ENST00000439724 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.48■□□□□ 0.07
SMAD3-202ENST00000439724 PHF23Q9BUL5 403 aaPredicted RBP15.48■□□□□ 0.07
SMAD3-202ENST00000439724 NKTRP30414 1462 aaKnown RBP15.47■□□□□ 0.07
SMAD3-202ENST00000439724 CCDC27Q2M243 656 aa15.47■□□□□ 0.07
SMAD3-202ENST00000439724 TSHZ2Q9NRE2 1034 aa15.47■□□□□ 0.07
SMAD3-202ENST00000439724 MAP2P11137 1827 aaKnown RBP15.47■□□□□ 0.07
SMAD3-202ENST00000439724 AATKQ6ZMQ8 1374 aa15.47■□□□□ 0.07
SMAD3-202ENST00000439724 PLEKHG3A1L390 1219 aa15.46■□□□□ 0.07
SMAD3-202ENST00000439724 U2AF1L5P0DN76 240 aaPredicted RBP15.46■□□□□ 0.07
SMAD3-202ENST00000439724 U2AF1Q01081 240 aaKnown RBP eCLIP15.46■□□□□ 0.07
SMAD3-202ENST00000439724 B4GALNT3Q6L9W6 998 aa15.46■□□□□ 0.07
SMAD3-202ENST00000439724 WWC1Q8IX03 1113 aa15.46■□□□□ 0.07
SMAD3-202ENST00000439724 TCP11L2Q8N4U5 519 aa15.46■□□□□ 0.07
SMAD3-202ENST00000439724 NCKAP5LQ9HCH0 1330 aa15.45■□□□□ 0.06
SMAD3-202ENST00000439724 CDK12Q9NYV4 1490 aaPredicted RBP15.45■□□□□ 0.06
SMAD3-202ENST00000439724 CHD2O14647 1828 aaKnown RBP15.44■□□□□ 0.06
SMAD3-202ENST00000439724 NME9Q86XW9 330 aa15.44■□□□□ 0.06
SMAD3-202ENST00000439724 DIAPH1O60610 1272 aaKnown RBP15.43■□□□□ 0.06
SMAD3-202ENST00000439724 WDR63Q8IWG1 891 aa15.43■□□□□ 0.06
SMAD3-202ENST00000439724 SPINK5Q9NQ38 1064 aaPredicted RBP15.43■□□□□ 0.06
SMAD3-202ENST00000439724 USP6P35125 1406 aa15.43■□□□□ 0.06
SMAD3-202ENST00000439724 ANKLE2Q86XL3 938 aa15.43■□□□□ 0.06
SMAD3-202ENST00000439724 POLKQ9UBT6 870 aa15.43■□□□□ 0.06
SMAD3-202ENST00000439724 ANKARQ7Z5J8 1434 aa15.43■□□□□ 0.06
SMAD3-202ENST00000439724 NALCNQ8IZF0 1738 aa15.42■□□□□ 0.06
SMAD3-202ENST00000439724 FMN2Q9NZ56 1722 aa15.42■□□□□ 0.06
SMAD3-202ENST00000439724 COG3Q96JB2 828 aa15.42■□□□□ 0.06
SMAD3-202ENST00000439724 PLEKHF1Q96S99 279 aa15.42■□□□□ 0.06
SMAD3-202ENST00000439724 DMRT2Q9Y5R5 561 aa15.42■□□□□ 0.06
SMAD3-202ENST00000439724 ACEP12821 1306 aa15.41■□□□□ 0.06
SMAD3-202ENST00000439724 SSH2Q76I76 1423 aa15.41■□□□□ 0.06
SMAD3-202ENST00000439724 U2SURPO15042 1029 aaKnown RBP15.41■□□□□ 0.06
SMAD3-202ENST00000439724 CCDC136Q96JN2 1154 aa15.41■□□□□ 0.06
SMAD3-202ENST00000439724 OVOS2A0A0J9YW53 1432 aa15.4■□□□□ 0.06
SMAD3-202ENST00000439724 OVOS2Q6IE36 1432 aa15.4■□□□□ 0.06
SMAD3-202ENST00000439724 EXOC6Q8TAG9 804 aa15.4■□□□□ 0.06
SMAD3-202ENST00000439724 PNNQ9H307 717 aaKnown RBP15.4■□□□□ 0.06
SMAD3-202ENST00000439724 RRP7AQ9Y3A4 280 aaKnown RBP15.4■□□□□ 0.06
SMAD3-202ENST00000439724 LRRC7Q96NW7 1537 aa15.4■□□□□ 0.06
SMAD3-202ENST00000439724 TTC21BQ7Z4L5 1316 aa15.4■□□□□ 0.06
SMAD3-202ENST00000439724 RGPD8O14715 1765 aaPredicted RBP15.4■□□□□ 0.06
SMAD3-202ENST00000439724 KCNA6P17658 529 aa15.39■□□□□ 0.05
SMAD3-202ENST00000439724 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.38■□□□□ 0.05
SMAD3-202ENST00000439724 ZRANB1Q9UGI0 708 aa15.38■□□□□ 0.05
SMAD3-202ENST00000439724 NEUROD2Q15784 382 aa15.38■□□□□ 0.05
SMAD3-202ENST00000439724 TTC21AQ8NDW8 1320 aa15.37■□□□□ 0.05
SMAD3-202ENST00000439724 MAPK8IP3Q9UPT6 1336 aa15.37■□□□□ 0.05
SMAD3-202ENST00000439724 PLIN1O60240 522 aa15.37■□□□□ 0.05
SMAD3-202ENST00000439724 FCHSD2O94868 740 aa15.37■□□□□ 0.05
SMAD3-202ENST00000439724 TMPOP42166 694 aaKnown RBP15.37■□□□□ 0.05
SMAD3-202ENST00000439724 EMILIN1Q9Y6C2 1016 aa15.37■□□□□ 0.05
SMAD3-202ENST00000439724 USP31Q70CQ4 1352 aa15.36■□□□□ 0.05
SMAD3-202ENST00000439724 NPHP4O75161 1426 aaPredicted RBP15.36■□□□□ 0.05
SMAD3-202ENST00000439724 NUTM2FA1L443 756 aa15.35■□□□□ 0.05
SMAD3-202ENST00000439724 FBLN1P23142 703 aa15.35■□□□□ 0.05
SMAD3-202ENST00000439724 USP54Q70EL1 1684 aa15.35■□□□□ 0.05
SMAD3-202ENST00000439724 RSPH6AQ9H0K4 717 aa15.35■□□□□ 0.05
SMAD3-202ENST00000439724 IL13P35225 146 aa15.34■□□□□ 0.05
SMAD3-202ENST00000439724 CRBNQ96SW2 442 aa15.34■□□□□ 0.05
SMAD3-202ENST00000439724 MYH16Q9H6N6 1097 aa15.34■□□□□ 0.05
SMAD3-202ENST00000439724 NWD1Q149M9 1564 aa15.34■□□□□ 0.05
SMAD3-202ENST00000439724 IL16Q14005 1332 aa15.33■□□□□ 0.05
SMAD3-202ENST00000439724 PPM1GO15355 546 aaPredicted RBP15.33■□□□□ 0.05
SMAD3-202ENST00000439724 TRIM35Q9UPQ4 493 aa15.33■□□□□ 0.04
SMAD3-202ENST00000439724 PIK3C2AO00443 1686 aa15.32■□□□□ 0.04
SMAD3-202ENST00000439724 ADGRL3Q9HAR2 1447 aa15.32■□□□□ 0.04
SMAD3-202ENST00000439724 PEAK1Q9H792 1746 aa15.31■□□□□ 0.04
SMAD3-202ENST00000439724 RRS1Q15050 365 aaKnown RBP15.31■□□□□ 0.04
SMAD3-202ENST00000439724 C20orf194Q5TEA3 1177 aa15.31■□□□□ 0.04
SMAD3-202ENST00000439724 NEFMP07197 916 aa15.3■□□□□ 0.04
SMAD3-202ENST00000439724 PRKAR2BP31323 418 aa15.3■□□□□ 0.04
SMAD3-202ENST00000439724 NGDNQ8NEJ9 315 aaKnown RBP15.3■□□□□ 0.04
SMAD3-202ENST00000439724 PMFBP1Q8TBY8 1022 aa15.3■□□□□ 0.04
SMAD3-202ENST00000439724 RGPD1P0DJD0 1748 aa15.29■□□□□ 0.04
SMAD3-202ENST00000439724 BCAR3O75815 825 aa15.29■□□□□ 0.04
SMAD3-202ENST00000439724 CT47B1P0C2W7 299 aaPredicted RBP15.29■□□□□ 0.04
SMAD3-202ENST00000439724 RIPK4P57078 832 aa15.29■□□□□ 0.04
SMAD3-202ENST00000439724 MARF1Q9Y4F3 1742 aaKnown RBP15.29■□□□□ 0.04
SMAD3-202ENST00000439724 FANCIQ9NVI1 1328 aa15.28■□□□□ 0.04
SMAD3-202ENST00000439724 RARSP54136 660 aaKnown RBP15.27■□□□□ 0.04
SMAD3-202ENST00000439724 PDE3AQ14432 1141 aa15.27■□□□□ 0.04
SMAD3-202ENST00000439724 NFE2L2Q16236 605 aa15.27■□□□□ 0.04
SMAD3-202ENST00000439724 HMOX1P09601 288 aa15.26■□□□□ 0.03
SMAD3-202ENST00000439724 RBM19Q9Y4C8 960 aaKnown RBP15.26■□□□□ 0.03
SMAD3-202ENST00000439724 DLG5Q8TDM6 1919 aa15.26■□□□□ 0.03
SMAD3-202ENST00000439724 EIF4A2Q14240 407 aaKnown RBP15.25■□□□□ 0.03
SMAD3-202ENST00000439724 SBNO1A3KN83 1393 aa15.25■□□□□ 0.03
SMAD3-202ENST00000439724 PHACTR3Q96KR7 559 aa15.24■□□□□ 0.03
SMAD3-202ENST00000439724 FLT4P35916 1363 aa15.23■□□□□ 0.03
SMAD3-202ENST00000439724 KIF24Q5T7B8 1368 aa15.23■□□□□ 0.03
SMAD3-202ENST00000439724 PHF8Q9UPP1 1060 aa15.23■□□□□ 0.03
SMAD3-202ENST00000439724 MAP3K19Q56UN5 1328 aa15.23■□□□□ 0.03
SMAD3-202ENST00000439724 CALD1Q05682 793 aaKnown RBP15.22■□□□□ 0.03
SMAD3-202ENST00000439724 ARHGEF10O15013 1369 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms