RNA–Protein interactions for RNA: ENST00000439706.5

SLC38A1-202, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-202ENST00000439706 PDCL3Q9H2J4 239 aa15.38■□□□□ 0.05
SLC38A1-202ENST00000439706 NINLQ9Y2I6 1382 aa15.38■□□□□ 0.05
SLC38A1-202ENST00000439706 UQCRHLA0A096LP55 91 aa15.37■□□□□ 0.05
SLC38A1-202ENST00000439706 SYCE3A1L190 88 aa15.37■□□□□ 0.05
SLC38A1-202ENST00000439706 UQCRHP07919 91 aa15.37■□□□□ 0.05
SLC38A1-202ENST00000439706 KIF2CQ99661 725 aa15.37■□□□□ 0.05
SLC38A1-202ENST00000439706 IPO8O15397 1037 aaKnown RBP15.37■□□□□ 0.05
SLC38A1-202ENST00000439706 TPM2P07951 284 aa15.37■□□□□ 0.05
SLC38A1-202ENST00000439706 HDAC1Q13547 482 aaPredicted RBP15.37■□□□□ 0.05
SLC38A1-202ENST00000439706 EIF2AK4Q9P2K8 1649 aaKnown RBP15.37■□□□□ 0.05
SLC38A1-202ENST00000439706 NGEFQ8N5V2 710 aa15.37■□□□□ 0.05
SLC38A1-202ENST00000439706 ZHX1Q9UKY1 873 aaPredicted RBP15.37■□□□□ 0.05
SLC38A1-202ENST00000439706 SMARCA5O60264 1052 aaPredicted RBP15.36■□□□□ 0.05
SLC38A1-202ENST00000439706 ERCC6Q03468 1493 aa15.36■□□□□ 0.05
SLC38A1-202ENST00000439706 RBM25P49756 843 aaKnown RBP15.36■□□□□ 0.05
SLC38A1-202ENST00000439706 TSPYL6Q8N831 410 aa15.36■□□□□ 0.05
SLC38A1-202ENST00000439706 ZNF830Q96NB3 372 aaPredicted RBP15.36■□□□□ 0.05
SLC38A1-202ENST00000439706 TRIM35Q9UPQ4 493 aa15.36■□□□□ 0.05
SLC38A1-202ENST00000439706 ZSCAN23Q3MJ62 389 aa15.35■□□□□ 0.05
SLC38A1-202ENST00000439706 OTUD7AQ8TE49 926 aaPredicted RBP15.35■□□□□ 0.05
SLC38A1-202ENST00000439706 POLR3AO14802 1390 aaPredicted RBP15.35■□□□□ 0.05
SLC38A1-202ENST00000439706 GDPD2Q9HCC8 539 aa15.34■□□□□ 0.05
SLC38A1-202ENST00000439706 IQGAP3Q86VI3 1631 aa15.34■□□□□ 0.05
SLC38A1-202ENST00000439706 RTEL1-TNFRSF6BF6WH68 1400 aa15.33■□□□□ 0.04
SLC38A1-202ENST00000439706 NSFL1CQ9UNZ2 370 aaKnown RBP15.33■□□□□ 0.04
SLC38A1-202ENST00000439706 MINK1Q8N4C8 1332 aaPredicted RBP15.33■□□□□ 0.04
SLC38A1-202ENST00000439706 AAMPQ13685 434 aa15.33■□□□□ 0.04
SLC38A1-202ENST00000439706 TSHZ3Q63HK5 1081 aa15.33■□□□□ 0.04
SLC38A1-202ENST00000439706 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.32■□□□□ 0.04
SLC38A1-202ENST00000439706 SNX21Q969T3 373 aa15.32■□□□□ 0.04
SLC38A1-202ENST00000439706 OFD1O75665 1012 aa15.32■□□□□ 0.04
SLC38A1-202ENST00000439706 DCTN1Q14203 1278 aa15.32■□□□□ 0.04
SLC38A1-202ENST00000439706 MAST1Q9Y2H9 1570 aa15.32■□□□□ 0.04
SLC38A1-202ENST00000439706 KLHL40Q2TBA0 621 aa15.31■□□□□ 0.04
SLC38A1-202ENST00000439706 C17orf53Q8N3J3 647 aaPredicted RBP15.31■□□□□ 0.04
SLC38A1-202ENST00000439706 PRKAR2BP31323 418 aa15.31■□□□□ 0.04
SLC38A1-202ENST00000439706 DDIT3P35638 169 aa15.31■□□□□ 0.04
SLC38A1-202ENST00000439706 CIZ1Q9ULV3 898 aaPredicted RBP15.31■□□□□ 0.04
SLC38A1-202ENST00000439706 TTC37Q6PGP7 1564 aa15.31■□□□□ 0.04
SLC38A1-202ENST00000439706 RNF17Q9BXT8 1623 aaKnown RBP15.31■□□□□ 0.04
SLC38A1-202ENST00000439706 BMP2KLQ5H9B9 411 aa15.3■□□□□ 0.04
SLC38A1-202ENST00000439706 ABCC2Q92887 1545 aa15.3■□□□□ 0.04
SLC38A1-202ENST00000439706 ERVK-7P63135 1459 aa15.3■□□□□ 0.04
SLC38A1-202ENST00000439706 TRAPPC8Q9Y2L5 1435 aa15.29■□□□□ 0.04
SLC38A1-202ENST00000439706 ATP10AO60312 1499 aa15.29■□□□□ 0.04
SLC38A1-202ENST00000439706 AK9Q5TCS8 1911 aa15.29■□□□□ 0.04
SLC38A1-202ENST00000439706 KIF16BQ96L93 1317 aa15.29■□□□□ 0.04
SLC38A1-202ENST00000439706 CDC45O75419 566 aa15.29■□□□□ 0.04
SLC38A1-202ENST00000439706 SIRT2Q8IXJ6 389 aa15.29■□□□□ 0.04
SLC38A1-202ENST00000439706 PHF23Q9BUL5 403 aaPredicted RBP15.29■□□□□ 0.04
SLC38A1-202ENST00000439706 ISY1Q9ULR0 285 aaKnown RBP15.29■□□□□ 0.04
SLC38A1-202ENST00000439706 UGGT1Q9NYU2 1555 aa15.28■□□□□ 0.04
SLC38A1-202ENST00000439706 SOX12O15370 315 aa15.28■□□□□ 0.04
SLC38A1-202ENST00000439706 SLC24A1O60721 1099 aa15.28■□□□□ 0.04
SLC38A1-202ENST00000439706 PLXNC1O60486 1568 aa15.28■□□□□ 0.04
SLC38A1-202ENST00000439706 FAM83GA6ND36 823 aa15.28■□□□□ 0.04
SLC38A1-202ENST00000439706 GSPT1P15170 499 aaKnown RBP15.28■□□□□ 0.04
SLC38A1-202ENST00000439706 LARP6Q9BRS8 491 aaKnown RBP15.28■□□□□ 0.04
SLC38A1-202ENST00000439706 DIAPH1O60610 1272 aaKnown RBP15.27■□□□□ 0.04
SLC38A1-202ENST00000439706 GPT2Q8TD30 523 aa15.27■□□□□ 0.04
SLC38A1-202ENST00000439706 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.27■□□□□ 0.04
SLC38A1-202ENST00000439706 NPC1L1Q9UHC9 1359 aa15.27■□□□□ 0.04
SLC38A1-202ENST00000439706 PHACTR3Q96KR7 559 aa15.27■□□□□ 0.04
SLC38A1-202ENST00000439706 LMBRD1Q9NUN5 540 aa15.27■□□□□ 0.04
SLC38A1-202ENST00000439706 ZBTB7BO15156 539 aaPredicted RBP15.27■□□□□ 0.03
SLC38A1-202ENST00000439706 IGSF3O75054 1194 aa15.27■□□□□ 0.03
SLC38A1-202ENST00000439706 KRT24Q2M2I5 525 aa15.27■□□□□ 0.03
SLC38A1-202ENST00000439706 TMEM63CQ9P1W3 806 aa15.26■□□□□ 0.03
SLC38A1-202ENST00000439706 DUOX2Q9NRD8 1548 aa15.26■□□□□ 0.03
SLC38A1-202ENST00000439706 NEK4P51957 841 aa15.26■□□□□ 0.03
SLC38A1-202ENST00000439706 PPP1R9BQ96SB3 815 aa15.26■□□□□ 0.03
SLC38A1-202ENST00000439706 KANK1Q14678 1352 aa15.26■□□□□ 0.03
SLC38A1-202ENST00000439706 CCDC27Q2M243 656 aa15.26■□□□□ 0.03
SLC38A1-202ENST00000439706 SLC4A10Q6U841 1118 aa15.26■□□□□ 0.03
SLC38A1-202ENST00000439706 PLEKHG5O94827 1062 aa15.25■□□□□ 0.03
SLC38A1-202ENST00000439706 IQGAP1P46940 1657 aa15.25■□□□□ 0.03
SLC38A1-202ENST00000439706 MADDQ8WXG6 1647 aa15.24■□□□□ 0.03
SLC38A1-202ENST00000439706 SYNMO15061 1565 aa15.24■□□□□ 0.03
SLC38A1-202ENST00000439706 CBX1P83916 185 aa15.24■□□□□ 0.03
SLC38A1-202ENST00000439706 PTPRTO14522 1441 aa15.24■□□□□ 0.03
SLC38A1-202ENST00000439706 PODXL2Q9NZ53 605 aa15.24■□□□□ 0.03
SLC38A1-202ENST00000439706 NOS1P29475 1434 aa15.24■□□□□ 0.03
SLC38A1-202ENST00000439706 NUCB2P80303 420 aa15.23■□□□□ 0.03
SLC38A1-202ENST00000439706 CLASP1Q7Z460 1538 aa15.23■□□□□ 0.03
SLC38A1-202ENST00000439706 EVC2Q86UK5 1308 aa15.23■□□□□ 0.03
SLC38A1-202ENST00000439706 PLEKHF1Q96S99 279 aa15.23■□□□□ 0.03
SLC38A1-202ENST00000439706 UPF3BQ9BZI7 483 aaKnown RBP15.23■□□□□ 0.03
SLC38A1-202ENST00000439706 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.23■□□□□ 0.03
SLC38A1-202ENST00000439706 SCAPERQ9BY12 1400 aa15.23■□□□□ 0.03
SLC38A1-202ENST00000439706 ST18O60284 1047 aa15.22■□□□□ 0.03
SLC38A1-202ENST00000439706 PLEKHM2Q8IWE5 1019 aa15.22■□□□□ 0.03
SLC38A1-202ENST00000439706 GCC1Q96CN9 775 aa15.22■□□□□ 0.03
SLC38A1-202ENST00000439706 PPIP5K1Q6PFW1 1433 aa15.22■□□□□ 0.03
SLC38A1-202ENST00000439706 C8orf58Q8NAV2 365 aa15.22■□□□□ 0.03
SLC38A1-202ENST00000439706 NOL7Q9UMY1 257 aaKnown RBP15.22■□□□□ 0.03
SLC38A1-202ENST00000439706 RABEP1Q15276 862 aa15.21■□□□□ 0.03
SLC38A1-202ENST00000439706 TWISTNBQ3B726 338 aaPredicted RBP15.21■□□□□ 0.03
SLC38A1-202ENST00000439706 TTC12Q9H892 705 aaPredicted RBP15.21■□□□□ 0.03
SLC38A1-202ENST00000439706 CHMP3Q9Y3E7 222 aa15.21■□□□□ 0.03
SLC38A1-202ENST00000439706 SDSP20132 328 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms