RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 STAC3Q96MF2 364 aa13.35□□□□□ -0.27
AC011228.1-201ENST00000439027 ARHGEF10O15013 1369 aa13.34□□□□□ -0.27
AC011228.1-201ENST00000439027 GPRASP1Q5JY77 1395 aa13.34□□□□□ -0.27
AC011228.1-201ENST00000439027 MARF1Q9Y4F3 1742 aaKnown RBP13.34□□□□□ -0.27
AC011228.1-201ENST00000439027 ANKARQ7Z5J8 1434 aa13.34□□□□□ -0.27
AC011228.1-201ENST00000439027 WASLO00401 505 aaPredicted RBP13.34□□□□□ -0.27
AC011228.1-201ENST00000439027 NGDNQ8NEJ9 315 aaKnown RBP13.34□□□□□ -0.27
AC011228.1-201ENST00000439027 EIF3AQ14152 1382 aaKnown RBP13.33□□□□□ -0.27
AC011228.1-201ENST00000439027 ADGRB1O14514 1584 aa13.33□□□□□ -0.28
AC011228.1-201ENST00000439027 PAK3O75914 559 aaPredicted RBP13.33□□□□□ -0.28
AC011228.1-201ENST00000439027 RALGAPBQ86X10 1494 aa13.33□□□□□ -0.28
AC011228.1-201ENST00000439027 SLIT2O94813 1529 aa13.33□□□□□ -0.28
AC011228.1-201ENST00000439027 FAM83GA6ND36 823 aa13.32□□□□□ -0.28
AC011228.1-201ENST00000439027 VPS72Q15906 364 aa13.32□□□□□ -0.28
AC011228.1-201ENST00000439027 CCDC125Q86Z20 511 aa13.32□□□□□ -0.28
AC011228.1-201ENST00000439027 SEPT12Q8IYM1 358 aa13.32□□□□□ -0.28
AC011228.1-201ENST00000439027 PRR36Q9H6K5 1346 aa13.32□□□□□ -0.28
AC011228.1-201ENST00000439027 A0A0G2JS52 829 aa13.31□□□□□ -0.28
AC011228.1-201ENST00000439027 SPDYE2BA6NHP3 402 aa13.31□□□□□ -0.28
AC011228.1-201ENST00000439027 SPDYE6P0CI01 402 aa13.31□□□□□ -0.28
AC011228.1-201ENST00000439027 MYT1Q01538 1121 aa13.31□□□□□ -0.28
AC011228.1-201ENST00000439027 SPDYE2Q495Y8 402 aa13.31□□□□□ -0.28
AC011228.1-201ENST00000439027 USP32Q8NFA0 1604 aa13.31□□□□□ -0.28
AC011228.1-201ENST00000439027 ZRANB1Q9UGI0 708 aa13.3□□□□□ -0.28
AC011228.1-201ENST00000439027 NUDT16Q96DE0 195 aaKnown RBP13.29□□□□□ -0.28
AC011228.1-201ENST00000439027 ADGRB2O60241 1585 aa13.28□□□□□ -0.28
AC011228.1-201ENST00000439027 CDK19Q9BWU1 502 aa13.28□□□□□ -0.28
AC011228.1-201ENST00000439027 BTG4Q9NY30 223 aa13.28□□□□□ -0.28
AC011228.1-201ENST00000439027 TULP4Q9NRJ4 1543 aa13.28□□□□□ -0.28
AC011228.1-201ENST00000439027 GLI3P10071 1580 aa13.28□□□□□ -0.28
AC011228.1-201ENST00000439027 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.27□□□□□ -0.28
AC011228.1-201ENST00000439027 EP400Q96L91 3159 aa13.27□□□□□ -0.28
AC011228.1-201ENST00000439027 SF3B2Q13435 895 aaKnown RBP13.27□□□□□ -0.29
AC011228.1-201ENST00000439027 FAM98CQ17RN3 349 aaKnown RBP13.26□□□□□ -0.29
AC011228.1-201ENST00000439027 KRT27Q7Z3Y8 459 aa13.26□□□□□ -0.29
AC011228.1-201ENST00000439027 ONECUT3O60422 494 aaPredicted RBP13.25□□□□□ -0.29
AC011228.1-201ENST00000439027 NBPF1Q3BBV0 1214 aa13.25□□□□□ -0.29
AC011228.1-201ENST00000439027 NUTM2GQ5VZR2 741 aa13.25□□□□□ -0.29
AC011228.1-201ENST00000439027 PRDM11Q9NQV5 511 aa13.25□□□□□ -0.29
AC011228.1-201ENST00000439027 DEFB132Q7Z7B7 95 aa13.24□□□□□ -0.29
AC011228.1-201ENST00000439027 REM2Q8IYK8 340 aaPredicted RBP13.24□□□□□ -0.29
AC011228.1-201ENST00000439027 PLCH1Q4KWH8 1693 aa13.24□□□□□ -0.29
AC011228.1-201ENST00000439027 BLMP54132 1417 aaPredicted RBP13.23□□□□□ -0.29
AC011228.1-201ENST00000439027 TRPM3Q9HCF6 1732 aaPredicted RBP13.23□□□□□ -0.29
AC011228.1-201ENST00000439027 CCDC61Q9Y6R9 512 aa13.23□□□□□ -0.29
AC011228.1-201ENST00000439027 SRCAPQ6ZRS2 3230 aa13.23□□□□□ -0.29
AC011228.1-201ENST00000439027 ABCA3Q99758 1704 aa13.22□□□□□ -0.29
AC011228.1-201ENST00000439027 NWD2Q9ULI1 1742 aa13.22□□□□□ -0.29
AC011228.1-201ENST00000439027 ACEP12821 1306 aa13.22□□□□□ -0.29
AC011228.1-201ENST00000439027 ZC3H6P61129 1189 aaKnown RBP13.22□□□□□ -0.29
AC011228.1-201ENST00000439027 SRPK2P78362 688 aaKnown RBP13.22□□□□□ -0.29
AC011228.1-201ENST00000439027 CHRNA2Q15822 529 aa13.22□□□□□ -0.29
AC011228.1-201ENST00000439027 NBPF8Q3BBV2 869 aa13.22□□□□□ -0.29
AC011228.1-201ENST00000439027 POTEHQ6S545 545 aa13.22□□□□□ -0.29
AC011228.1-201ENST00000439027 BRWD3Q6RI45 1802 aa13.22□□□□□ -0.29
AC011228.1-201ENST00000439027 ARHGEF28Q8N1W1 1705 aaKnown RBP13.22□□□□□ -0.29
AC011228.1-201ENST00000439027 STRN4Q9NRL3 753 aa13.21□□□□□ -0.29
AC011228.1-201ENST00000439027 ATP7BP35670 1465 aa13.21□□□□□ -0.3
AC011228.1-201ENST00000439027 ALS2Q96Q42 1657 aa13.21□□□□□ -0.3
AC011228.1-201ENST00000439027 SPATA31A5Q5VU36 1347 aa13.2□□□□□ -0.3
AC011228.1-201ENST00000439027 SPATA31A7Q8IWB4 1347 aa13.2□□□□□ -0.3
AC011228.1-201ENST00000439027 PLEKHG3A1L390 1219 aa13.2□□□□□ -0.3
AC011228.1-201ENST00000439027 CHRDL2Q6WN34 429 aa13.2□□□□□ -0.3
AC011228.1-201ENST00000439027 COL14A1Q05707 1796 aaKnown RBP13.2□□□□□ -0.3
AC011228.1-201ENST00000439027 KIAA0232Q92628 1395 aa13.2□□□□□ -0.3
AC011228.1-201ENST00000439027 CENPJQ9HC77 1338 aaPredicted RBP13.19□□□□□ -0.3
AC011228.1-201ENST00000439027 EVA1CP58658 441 aa13.19□□□□□ -0.3
AC011228.1-201ENST00000439027 FAM182BQ5T319 152 aa13.19□□□□□ -0.3
AC011228.1-201ENST00000439027 ABTB2Q8N961 1025 aa13.19□□□□□ -0.3
AC011228.1-201ENST00000439027 ZNF692Q9BU19 519 aaPredicted RBP13.19□□□□□ -0.3
AC011228.1-201ENST00000439027 CABP2Q9NPB3 220 aa13.19□□□□□ -0.3
AC011228.1-201ENST00000439027 BAG6P46379 1132 aa13.18□□□□□ -0.3
AC011228.1-201ENST00000439027 NEUROD1Q13562 356 aa13.18□□□□□ -0.3
AC011228.1-201ENST00000439027 CCER1Q8TC90 406 aaPredicted RBP13.18□□□□□ -0.3
AC011228.1-201ENST00000439027 L3MBTL2Q969R5 705 aa13.18□□□□□ -0.3
AC011228.1-201ENST00000439027 ITSN1Q15811 1721 aa13.18□□□□□ -0.3
AC011228.1-201ENST00000439027 POLR3AO14802 1390 aaPredicted RBP13.18□□□□□ -0.3
AC011228.1-201ENST00000439027 SIN3AQ96ST3 1273 aa13.17□□□□□ -0.3
AC011228.1-201ENST00000439027 USP35Q9P2H5 1018 aa13.17□□□□□ -0.3
AC011228.1-201ENST00000439027 NRAPQ86VF7 1730 aa13.16□□□□□ -0.3
AC011228.1-201ENST00000439027 KIAA1210Q9ULL0 1709 aa13.16□□□□□ -0.3
AC011228.1-201ENST00000439027 SPATA31A1Q5TZJ5 1347 aa13.15□□□□□ -0.3
AC011228.1-201ENST00000439027 PPIP5K1Q6PFW1 1433 aa13.15□□□□□ -0.3
AC011228.1-201ENST00000439027 ZBTB7CA1YPR0 619 aa13.15□□□□□ -0.3
AC011228.1-201ENST00000439027 NLRP13Q86W25 1043 aa13.15□□□□□ -0.3
AC011228.1-201ENST00000439027 SSUH2Q9Y2M2 353 aa13.15□□□□□ -0.3
AC011228.1-201ENST00000439027 EN1Q05925 392 aaPredicted RBP13.14□□□□□ -0.31
AC011228.1-201ENST00000439027 CABP1Q9NZU7 370 aa13.14□□□□□ -0.31
AC011228.1-201ENST00000439027 PSDA5PKW4 1024 aaPredicted RBP13.13□□□□□ -0.31
AC011228.1-201ENST00000439027 GCP02774 474 aa13.12□□□□□ -0.31
AC011228.1-201ENST00000439027 NLRP6P59044 892 aa13.12□□□□□ -0.31
AC011228.1-201ENST00000439027 PDE3BQ13370 1112 aa13.12□□□□□ -0.31
AC011228.1-201ENST00000439027 LARP1Q6PKG0 1096 aaKnown RBP13.12□□□□□ -0.31
AC011228.1-201ENST00000439027 CRYBG1Q9Y4K1 1723 aa13.12□□□□□ -0.31
AC011228.1-201ENST00000439027 EVC2Q86UK5 1308 aa13.12□□□□□ -0.31
AC011228.1-201ENST00000439027 TRIM37O94972 964 aa13.11□□□□□ -0.31
AC011228.1-201ENST00000439027 FAM196AQ6ZSG2 479 aa13.11□□□□□ -0.31
AC011228.1-201ENST00000439027 TOPAZ1Q8N9V7 1692 aa13.11□□□□□ -0.31
AC011228.1-201ENST00000439027 USP19O94966 1318 aa13.11□□□□□ -0.31
AC011228.1-201ENST00000439027 PITPNM1O00562 1244 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms