RNA–Protein interactions for RNA: ENST00000438929.5

BDNF-210, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-210ENST00000438929 RAB3GAP1Q15042 981 aa7.5□□□□□ -1.21
BDNF-210ENST00000438929 PPP4R3BQ5MIZ7 849 aa7.5□□□□□ -1.21
BDNF-210ENST00000438929 SLC4A10Q6U841 1118 aa7.5□□□□□ -1.21
BDNF-210ENST00000438929 DIAPH3Q9NSV4 1193 aa7.5□□□□□ -1.21
BDNF-210ENST00000438929 ZKSCAN5Q9Y2L8 839 aa7.5□□□□□ -1.21
BDNF-210ENST00000438929 TRIM27P14373 513 aa7.5□□□□□ -1.21
BDNF-210ENST00000438929 KCNJ4P48050 445 aa7.5□□□□□ -1.21
BDNF-210ENST00000438929 INTS3Q68E01 1043 aaKnown RBP7.5□□□□□ -1.21
BDNF-210ENST00000438929 PDCL2Q8N4E4 241 aa7.5□□□□□ -1.21
BDNF-210ENST00000438929 GAS2L2Q8NHY3 880 aa7.5□□□□□ -1.21
BDNF-210ENST00000438929 SSH1Q8WYL5 1049 aa7.5□□□□□ -1.21
BDNF-210ENST00000438929 SLC12A5Q9H2X9 1139 aa7.5□□□□□ -1.21
BDNF-210ENST00000438929 CGNQ9P2M7 1197 aaKnown RBP7.5□□□□□ -1.21
BDNF-210ENST00000438929 CFAP70Q5T0N1 1121 aa7.5□□□□□ -1.21
BDNF-210ENST00000438929 TSC1Q92574 1164 aa7.5□□□□□ -1.21
BDNF-210ENST00000438929 IFT57Q9NWB7 429 aa7.5□□□□□ -1.21
BDNF-210ENST00000438929 ZRSR1Q15695 479 aaKnown RBP7.49□□□□□ -1.21
BDNF-210ENST00000438929 WDR63Q8IWG1 891 aa7.49□□□□□ -1.21
BDNF-210ENST00000438929 TESK2Q96S53 571 aa7.49□□□□□ -1.21
BDNF-210ENST00000438929 ANO2Q9NQ90 1003 aa7.49□□□□□ -1.21
BDNF-210ENST00000438929 ATRXP46100 2492 aa7.49□□□□□ -1.21
BDNF-210ENST00000438929 RALGAPBQ86X10 1494 aa7.49□□□□□ -1.21
BDNF-210ENST00000438929 PPRC1Q5VV67 1664 aaKnown RBP7.49□□□□□ -1.21
BDNF-210ENST00000438929 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.49□□□□□ -1.21
BDNF-210ENST00000438929 USP25Q9UHP3 1055 aa7.49□□□□□ -1.21
BDNF-210ENST00000438929 TBC1D9Q6ZT07 1266 aa7.48□□□□□ -1.21
BDNF-210ENST00000438929 GDPD2Q9HCC8 539 aa7.48□□□□□ -1.21
BDNF-210ENST00000438929 SMC5Q8IY18 1101 aa7.48□□□□□ -1.21
BDNF-210ENST00000438929 RBSNQ9H1K0 784 aa7.48□□□□□ -1.21
BDNF-210ENST00000438929 CCDC27Q2M243 656 aa7.48□□□□□ -1.21
BDNF-210ENST00000438929 ABCC2Q92887 1545 aa7.48□□□□□ -1.21
BDNF-210ENST00000438929 C9orf84Q5VXU9 1444 aa7.47□□□□□ -1.21
BDNF-210ENST00000438929 KDM5BQ9UGL1 1544 aa7.47□□□□□ -1.21
BDNF-210ENST00000438929 FIBPO43427 364 aa7.47□□□□□ -1.21
BDNF-210ENST00000438929 SMAP1Q8IYB5 467 aaPredicted RBP7.47□□□□□ -1.21
BDNF-210ENST00000438929 GGNBP2Q9H3C7 697 aa7.47□□□□□ -1.21
BDNF-210ENST00000438929 CWC22Q9HCG8 908 aaKnown RBP7.47□□□□□ -1.21
BDNF-210ENST00000438929 NOL7Q9UMY1 257 aaKnown RBP7.47□□□□□ -1.21
BDNF-210ENST00000438929 KDM6BO15054 1643 aa7.47□□□□□ -1.21
BDNF-210ENST00000438929 GCC1Q96CN9 775 aa7.47□□□□□ -1.21
BDNF-210ENST00000438929 TTC12Q9H892 705 aaPredicted RBP7.47□□□□□ -1.21
BDNF-210ENST00000438929 PLB1Q6P1J6 1458 aa7.47□□□□□ -1.21
BDNF-210ENST00000438929 HECW1Q76N89 1606 aa7.47□□□□□ -1.21
BDNF-210ENST00000438929 KIF3BO15066 747 aa7.47□□□□□ -1.21
BDNF-210ENST00000438929 SOX12O15370 315 aa7.47□□□□□ -1.21
BDNF-210ENST00000438929 PLCD3Q8N3E9 789 aa7.47□□□□□ -1.21
BDNF-210ENST00000438929 SNX21Q969T3 373 aa7.47□□□□□ -1.21
BDNF-210ENST00000438929 CCDC94Q9BW85 323 aaPredicted RBP7.47□□□□□ -1.21
BDNF-210ENST00000438929 RSPH4AQ5TD94 716 aa7.46□□□□□ -1.21
BDNF-210ENST00000438929 ABCA8O94911 1581 aa7.46□□□□□ -1.21
BDNF-210ENST00000438929 ZMYM4Q5VZL5 1548 aa7.46□□□□□ -1.22
BDNF-210ENST00000438929 ERICH4A6NGS2 130 aa7.46□□□□□ -1.22
BDNF-210ENST00000438929 BLMP54132 1417 aaPredicted RBP7.46□□□□□ -1.22
BDNF-210ENST00000438929 HMMRO75330 724 aa7.46□□□□□ -1.22
BDNF-210ENST00000438929 HSP90B1P14625 803 aaKnown RBP7.46□□□□□ -1.22
BDNF-210ENST00000438929 OS9Q13438 667 aaPredicted RBP7.46□□□□□ -1.22
BDNF-210ENST00000438929 BMP2KLQ5H9B9 411 aa7.46□□□□□ -1.22
BDNF-210ENST00000438929 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.46□□□□□ -1.22
BDNF-210ENST00000438929 HMOX1P09601 288 aa7.45□□□□□ -1.22
BDNF-210ENST00000438929 MCM5P33992 734 aa7.45□□□□□ -1.22
BDNF-210ENST00000438929 VPS37CA5D8V6 355 aaPredicted RBP7.45□□□□□ -1.22
BDNF-210ENST00000438929 TMEM132EQ6IEE7 984 aa7.45□□□□□ -1.22
BDNF-210ENST00000438929 LRSAM1Q6UWE0 723 aa7.45□□□□□ -1.22
BDNF-210ENST00000438929 ZFP91Q96JP5 570 aaPredicted RBP7.45□□□□□ -1.22
BDNF-210ENST00000438929 TRERF1Q96PN7 1200 aa7.45□□□□□ -1.22
BDNF-210ENST00000438929 NRDCO43847 1150 aa7.45□□□□□ -1.22
BDNF-210ENST00000438929 C17orf53Q8N3J3 647 aaPredicted RBP7.45□□□□□ -1.22
BDNF-210ENST00000438929 ZGPATQ8N5A5 531 aaKnown RBP7.45□□□□□ -1.22
BDNF-210ENST00000438929 PPP1R9BQ96SB3 815 aa7.45□□□□□ -1.22
BDNF-210ENST00000438929 NOLC1Q14978 699 aaKnown RBP eCLIP7.44□□□□□ -1.22
BDNF-210ENST00000438929 HS1BP3Q53T59 392 aa7.44□□□□□ -1.22
BDNF-210ENST00000438929 ZCCHC11Q5TAX3 1644 aaKnown RBP7.44□□□□□ -1.22
BDNF-210ENST00000438929 PZPP20742 1482 aa7.44□□□□□ -1.22
BDNF-210ENST00000438929 DIAPH1O60610 1272 aaKnown RBP7.44□□□□□ -1.22
BDNF-210ENST00000438929 HDAC1Q13547 482 aaPredicted RBP7.44□□□□□ -1.22
BDNF-210ENST00000438929 CHAMP1Q96JM3 812 aa7.44□□□□□ -1.22
BDNF-210ENST00000438929 UPF3BQ9BZI7 483 aaKnown RBP7.44□□□□□ -1.22
BDNF-210ENST00000438929 UHRF1BP1LA0JNW5 1464 aa7.44□□□□□ -1.22
BDNF-210ENST00000438929 DENND4BO75064 1496 aaPredicted RBP7.44□□□□□ -1.22
BDNF-210ENST00000438929 CCDC66A2RUB6 948 aa7.44□□□□□ -1.22
BDNF-210ENST00000438929 ATP6V1DQ9Y5K8 247 aa7.44□□□□□ -1.22
BDNF-210ENST00000438929 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.44□□□□□ -1.22
BDNF-210ENST00000438929 CAMSAP2Q08AD1 1489 aa7.43□□□□□ -1.22
BDNF-210ENST00000438929 ADCY5O95622 1261 aa7.43□□□□□ -1.22
BDNF-210ENST00000438929 HCLS1P14317 486 aaPredicted RBP7.43□□□□□ -1.22
BDNF-210ENST00000438929 RBM25P49756 843 aaKnown RBP7.43□□□□□ -1.22
BDNF-210ENST00000438929 NUCB1Q02818 461 aa7.43□□□□□ -1.22
BDNF-210ENST00000438929 TPD52L1Q16890 204 aaPredicted RBP7.43□□□□□ -1.22
BDNF-210ENST00000438929 GGT6Q6P531 493 aa7.43□□□□□ -1.22
BDNF-210ENST00000438929 API5Q9BZZ5 524 aaKnown RBP7.43□□□□□ -1.22
BDNF-210ENST00000438929 TRIM5Q9C035 493 aa7.43□□□□□ -1.22
BDNF-210ENST00000438929 KANK1Q14678 1352 aa7.43□□□□□ -1.22
BDNF-210ENST00000438929 CD2BP2O95400 341 aaKnown RBP7.43□□□□□ -1.22
BDNF-210ENST00000438929 TROQ12816 1431 aaPredicted RBP7.43□□□□□ -1.22
BDNF-210ENST00000438929 TCOF1Q13428 1488 aaKnown RBP7.43□□□□□ -1.22
BDNF-210ENST00000438929 TMPOP42166 694 aaKnown RBP7.43□□□□□ -1.22
BDNF-210ENST00000438929 TERF1P54274 439 aa7.43□□□□□ -1.22
BDNF-210ENST00000438929 PRIMPOLQ96LW4 560 aa7.43□□□□□ -1.22
BDNF-210ENST00000438929 THUMPD2Q9BTF0 503 aaKnown RBP7.43□□□□□ -1.22
BDNF-210ENST00000438929 GPRASP1Q5JY77 1395 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms